Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 5.2e-165 584.3 297 100.0
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 5.2e-165 584.3 297 100.0
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 6.7e-165 583.9 297 99.7
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 5.3e-154 547.7 298 95.0
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 5.3e-154 547.7 298 95.0
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 8.8e-149 530.4 305 91.8
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 8.3e-139 497.3 303 86.5
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 2.5e-135 485.7 303 86.5
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 1.2e-132 476.9 303 84.5
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 1.2e-132 476.9 303 83.8
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 6.4e-131 471.1 303 83.5
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 4.1e-130 468.4 303 82.5
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 1.6e-126 456.4 303 79.9
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 8.1e-118 427.6 297 74.1
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 1.2e-105 387.1 302 66.6
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 1.7e-104 383.3 295 66.8
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 5.1e-104 381.7 301 66.4
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 5.1e-104 381.7 295 65.8
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 8.7e-104 380.9 244 76.2
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 1.1e-103 380.6 262 71.4
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 7.3e-103 377.9 242 76.9
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 7.3e-103 377.9 297 65.3
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 1.6e-102 376.7 259 71.0
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 2.8e-102 375.9 244 74.6
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 6.2e-102 374.8 244 75.4
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 8.1e-102 374.4 256 73.0
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 1.1e-101 374.0 297 65.7
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 1.4e-101 373.6 249 74.7
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 4.0e-101 372.1 298 65.1
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 4.0e-101 372.1 247 74.9
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 4.0e-101 372.1 249 74.3
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 5.3e-101 371.7 241 75.1
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 1.2e-100 370.5 248 74.2
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 1.2e-100 370.5 249 74.3
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 3.4e-100 369.0 247 72.9
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 3.4e-100 369.0 302 64.6
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 3.4e-100 369.0 302 64.6
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 4.4e-100 368.6 215 80.9
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 7.6e-100 367.9 248 73.4
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 9.9e-100 367.5 248 73.0
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 9.9e-100 367.5 248 74.2
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 9.9e-100 367.5 302 64.2
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 1.7e-99 366.7 297 64.0
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 1.7e-99 366.7 297 65.0
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 1.7e-99 366.7 263 67.7
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 2.2e-99 366.3 248 73.0
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 3.8e-99 365.5 279 67.0
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 4.9e-99 365.2 263 69.2
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 1.1e-98 364.0 246 71.5
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 3.2e-98 362.5 293 66.2
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 3.2e-98 362.5 248 70.2
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 4.2e-98 362.1 292 63.0
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 5.4e-98 361.7 259 69.1
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 1.6e-97 360.1 263 68.1
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 3.5e-97 359.0 257 67.7
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 1.3e-96 357.1 222 77.9
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.3e-96 356.3 246 69.5
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 3.0e-96 355.9 288 63.9
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 6.6e-96 354.8 244 69.7
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 2.5e-95 352.8 248 68.5
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 7.3e-95 351.3 256 66.4
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 6.2e-94 348.2 283 61.5
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 1.1e-93 347.4 302 61.9
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 1.8e-93 346.7 251 69.3
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 1.8e-93 346.7 248 68.1
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 1.8e-93 346.7 254 68.9
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 4.0e-93 345.5 248 69.0
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 6.9e-93 344.7 267 65.5
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 9.0e-93 344.4 243 67.5
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 2.0e-92 343.2 252 67.5
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 7.6e-92 341.3 304 56.6
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 8.4e-91 337.8 259 65.3
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 1.1e-90 337.4 248 66.9
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 2.4e-90 336.3 241 68.0
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 5.4e-90 335.1 235 69.8
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 9.3e-90 334.3 281 63.0
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 1.2e-89 334.0 243 65.8
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 1.6e-89 333.6 245 66.5
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 2.1e-89 333.2 295 60.7
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 2.1e-89 333.2 248 66.1
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 6.0e-89 331.6 281 62.3
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 1.1e-87 327.4 271 60.9
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 5.6e-87 325.1 224 72.8
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 7.4e-87 324.7 269 61.7
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 1.9e-82 310.1 316 54.7
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 5.5e-82 308.5 290 56.9
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 3.9e-80 302.4 281 58.4
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 1.9e-79 300.1 248 64.1
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 2.1e-78 296.6 223 65.9
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 6.2e-78 295.0 214 69.2
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 6.9e-77 291.6 216 68.5
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 9.0e-77 291.2 223 67.7
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 9.3e-74 281.2 183 72.1
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 3.9e-72 275.8 158 84.2
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 8.7e-72 274.6 200 69.5
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 2.8e-70 269.6 243 54.7
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 2.0e-68 263.5 209 65.6
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 1.0e-67 261.2 264 57.2
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 3.8e-67 259.2 214 63.1
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 3.8e-67 259.2 214 63.1
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 8.5e-67 258.1 264 52.7
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 7.2e-66 255.0 307 48.2
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.1e-63 247.7 167 70.1
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 2.2e-54 216.9 174 62.1
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 3.1e-45 186.4 130 70.0
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 6.1e-41 172.2 101 73.3
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 2.7e-36 156.8 294 34.4
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 2.3e-32 143.7 107 61.7
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 2.9e-27 126.7 196 37.2
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.7e-11 74.3 56 67.9
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 5.0e-11 72.8 101 41.6
AUR62039657 Chenopodium quinoa HOM05D002933 ORTHO05D007742 8.3e-06 55.5 276 22.5


User provided reference genes

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