Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p65230 Brassica napus HOM05D011070 ORTHO05D014113 3.9e-96 354.8 174 100.0
BcaC04g19213 Brassica carinata HOM05D011070 ORTHO05D014113 3.3e-95 351.7 174 99.4
C07p06730 Brassica napus HOM05D011070 ORTHO05D014113 8.7e-88 327.0 174 92.5
BolC7t41096H Brassica oleracea HOM05D011070 ORTHO05D014113 8.7e-88 327.0 174 92.5
C07p41760 Brassica napus HOM05D011070 ORTHO05D014113 1.3e-86 323.2 174 92.0
C02p46850 Brassica napus HOM05D011070 ORTHO05D014113 8.1e-86 320.5 174 90.2
BraA03t15117Z Brassica rapa HOM05D011070 ORTHO05D014113 1.3e-54 216.9 147 76.9
BolC9t59352H Brassica oleracea HOM05D011070 ORTHO05D014113 4.8e-54 214.9 108 98.1
BraA01t03524Z Brassica rapa HOM05D011070 ORTHO05D014113 9.1e-53 210.7 124 83.9
BcaC06g36188 Brassica carinata HOM05D011070 ORTHO05D014113 2.2e-51 206.1 115 88.7
C05p22570 Brassica napus HOM05D011070 ORTHO05D014113 1.1e-50 203.8 174 65.5
BolC3t21117H Brassica oleracea HOM05D011070 ORTHO05D014113 1.4e-48 196.8 104 93.3
BolC2t10730H Brassica oleracea HOM05D011070 ORTHO05D014113 2.2e-46 189.5 104 90.4
A01p34250 Brassica napus HOM05D011070 ORTHO05D014113 2.2e-43 179.5 94 92.6
C04p29060 Brassica napus HOM05D011070 ORTHO05D014113 6.7e-40 167.9 89 89.9
A03p60810 Brassica napus HOM05D011070 ORTHO05D033336 8.8e-40 167.5 95 88.4
BolC5t30956H Brassica oleracea HOM05D011070 ORTHO05D033336 4.8e-38 161.8 90 88.9
BcaB05g22557 Brassica carinata HOM05D002513 ORTHO05D002720 2.5e-34 149.4 80 88.8
BraA10t42323Z Brassica rapa HOM05D011070 ORTHO05D033336 1.2e-28 130.6 100 73.0
A09p23030 Brassica napus HOM05D002513 ORTHO05D002720 5.4e-21 105.1 71 76.1
BraA09t37907Z Brassica rapa HOM05D002513 ORTHO05D002720 5.4e-21 105.1 71 76.1
Sp2g12130 Schrenkiella parvula HOM05D002513 ORTHO05D002720 9.2e-21 104.4 70 74.3
BcaC04g21626 Brassica carinata HOM05D002513 ORTHO05D002720 4.5e-20 102.1 71 73.2
C09p29740 Brassica napus HOM05D002513 ORTHO05D002720 4.5e-20 102.1 71 73.2
BolC9t55837H Brassica oleracea HOM05D002513 ORTHO05D002720 4.5e-20 102.1 71 73.2
BcaB07g30777 Brassica carinata HOM05D002513 ORTHO05D002720 2.3e-19 99.8 70 71.4
BcaC03g16810 Brassica carinata HOM05D030553 ORTHO05D027181 2.5e-18 96.3 70 70.0
Thhalv10000768m.g Eutrema salsugineum HOM05D002513 ORTHO05D002720 3.0e-16 89.4 70 67.1
AT5G47430 Arabidopsis thaliana HOM05D002513 ORTHO05D002720 1.2e-15 87.4 70 64.3
AL8G10610 Arabidopsis lyrata HOM05D002513 ORTHO05D002720 3.2e-13 79.3 70 61.4
Aa31sc151G10 Aethionema arabicum HOM05D002513 ORTHO05D002720 7.0e-13 78.2 71 62.0
CARHR173950 Cardamine hirsuta HOM05D002513 ORTHO05D002720 1.2e-12 77.4 70 60.0
Sp7g16790 Schrenkiella parvula HOM05D002513 ORTHO05D002720 1.7e-11 73.6 69 60.9
BcaNung00096 Brassica carinata HOM05D002513 ORTHO05D002720 3.0e-11 72.8 69 58.0
Thhalv10024408m.g Eutrema salsugineum HOM05D002513 ORTHO05D002720 1.9e-10 70.1 71 53.5
BolC1t02460H Brassica oleracea HOM05D002513 ORTHO05D002720 2.5e-10 69.7 69 56.5
Carub.0008s0036 Capsella rubella HOM05D002513 ORTHO05D002720 7.3e-10 68.2 63 61.9
AL7G37310 Arabidopsis lyrata HOM05D002513 ORTHO05D002720 9.5e-10 67.8 71 56.3
CARHR224010 Cardamine hirsuta HOM05D002513 ORTHO05D002720 9.5e-10 67.8 73 57.5
BcaC09g50468 Brassica carinata HOM05D002513 ORTHO05D002720 2.1e-09 66.6 69 55.1
C01p25090 Brassica napus HOM05D002513 ORTHO05D002720 2.1e-09 66.6 69 55.1
Carub.0007s2401 Capsella rubella HOM05D002513 ORTHO05D002720 4.7e-09 65.5 72 50.0
THA.LOC104798367 Tarenaya hassleriana HOM05D002513 ORTHO05D002720 2.3e-08 63.2 71 53.5
A01p20000 Brassica napus HOM05D002513 ORTHO05D002720 1.2e-07 60.8 69 52.2
BraA01t01923Z Brassica rapa HOM05D002513 ORTHO05D002720 1.2e-07 60.8 69 52.2
Aa31LG6G140 Aethionema arabicum HOM05D002513 ORTHO05D002720 3.4e-07 59.3 71 50.7


User provided reference genes

Program Settings