Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 1.0e-199 699.9 370 100.0
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 2.9e-197 691.8 370 99.2
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 2.3e-191 672.2 373 96.0
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 2.3e-191 672.2 373 96.0
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 7.8e-187 657.1 371 95.7
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 2.1e-176 622.5 389 87.7
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 6.2e-176 620.9 392 86.7
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 1.8e-175 619.4 383 86.4
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 7.1e-172 607.4 382 86.9
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 3.0e-170 602.1 392 82.9
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 5.1e-170 601.3 393 84.2
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 2.4e-167 592.4 379 86.0
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 6.9e-167 590.9 379 85.5
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 2.4e-159 565.8 404 77.0
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 5.4e-156 554.7 389 77.4
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 3.4e-150 535.4 387 78.6
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 5.8e-142 508.1 305 88.2
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 4.3e-129 465.3 385 68.6
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 4.3e-129 465.3 378 68.5
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 1.3e-128 463.8 375 69.9
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 1.8e-127 459.9 324 75.9
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 3.1e-127 459.1 383 67.4
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 5.3e-127 458.4 380 67.4
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 6.9e-127 458.0 381 68.0
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 1.5e-126 456.8 382 68.1
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 1.5e-126 456.8 377 67.9
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 2.0e-126 456.4 374 69.0
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.7e-125 453.4 375 68.3
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 2.2e-125 453.0 376 68.6
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 5.0e-125 451.8 379 68.9
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 6.5e-125 451.4 322 74.5
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.1e-124 450.7 375 67.7
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 5.5e-124 448.4 376 67.6
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 1.6e-123 446.8 388 64.9
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 2.1e-123 446.4 377 67.1
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.1e-123 446.4 377 67.1
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 4.7e-123 445.3 377 67.1
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.4e-122 443.7 377 66.8
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 1.4e-122 443.7 375 66.9
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 3.0e-122 442.6 378 66.9
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 3.9e-122 442.2 321 73.5
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 5.1e-122 441.8 377 65.0
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 8.8e-122 441.0 377 65.0
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 1.5e-121 440.3 347 70.9
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 2.0e-121 439.9 325 73.5
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 2.0e-121 439.9 383 63.7
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 2.6e-121 439.5 342 70.2
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 5.7e-121 438.3 346 69.7
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 5.7e-121 438.3 385 62.6
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.3e-120 437.2 385 66.0
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 1.3e-120 437.2 338 71.6
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 1.7e-120 436.8 369 65.0
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 2.8e-120 436.0 392 63.3
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 4.8e-120 435.3 367 66.8
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 2.0e-118 429.9 366 66.1
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 7.7e-118 427.9 372 63.7
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 1.0e-117 427.6 369 65.3
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 1.3e-117 427.2 330 70.3
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 5.0e-117 425.2 366 64.8
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 5.0e-117 425.2 370 65.9
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 5.0e-117 425.2 342 67.0
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 1.1e-116 424.1 368 65.2
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 2.5e-116 422.9 317 71.0
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 9.4e-116 421.0 316 71.2
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 1.2e-115 420.6 399 62.4
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 2.7e-115 419.5 314 71.7
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 3.6e-115 419.1 349 68.5
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 4.7e-115 418.7 380 61.6
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 6.1e-115 418.3 258 82.6
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 1.0e-114 417.5 374 63.9
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 1.4e-114 417.2 326 69.3
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 3.0e-114 416.0 369 64.0
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 5.2e-114 415.2 369 63.4
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 6.7e-114 414.8 275 76.4
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 1.1e-113 414.1 301 73.4
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 2.2e-112 409.8 331 68.3
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 2.2e-112 409.8 380 61.3
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 4.1e-111 405.6 329 67.5
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 1.0e-109 401.0 389 62.7
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 2.2e-109 399.8 326 69.9
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 2.7e-107 392.9 335 65.7
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 8.8e-106 387.9 312 66.7
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 2.6e-105 386.3 315 67.3
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 2.6e-105 386.3 308 66.9
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 7.5e-105 384.8 345 62.0
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 1.7e-104 383.6 325 62.5
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 4.1e-103 379.0 323 62.5
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 2.9e-101 372.9 304 65.8
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 3.2e-100 369.4 257 75.9
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 7.2e-100 368.2 306 66.3
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 8.0e-99 364.8 328 61.0
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 3.0e-98 362.8 335 63.6
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 1.2e-97 360.9 488 47.7
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 7.5e-97 358.2 493 46.9
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 9.8e-97 357.8 271 68.3
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 3.7e-96 355.9 362 57.2
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 1.2e-94 350.9 274 67.2
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 2.0e-94 350.1 343 60.3
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 2.7e-94 349.7 373 58.2
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 5.6e-92 342.0 287 61.0
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 6.1e-91 338.6 295 65.4
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 7.5e-89 331.6 205 82.9
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.7e-88 330.5 234 73.9
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 1.7e-85 320.5 210 75.2
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 9.8e-81 304.7 421 49.9
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 8.3e-80 301.6 310 59.0
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 7.8e-78 295.0 176 86.4
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 6.8e-74 282.0 330 53.3
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 8.9e-74 281.6 274 55.5
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 1.5e-73 280.8 263 57.0
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 1.1e-71 274.6 263 58.6
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.9e-68 263.8 258 55.4
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 2.8e-67 260.0 257 58.0
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 4.7e-67 259.2 188 70.2
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 3.2e-63 246.5 261 53.3
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 7.1e-63 245.4 157 78.3
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 2.8e-59 233.4 354 43.2
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 6.0e-54 215.7 129 85.3
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 1.3e-53 214.5 130 83.8
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 2.6e-49 200.3 138 74.6
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 3.5e-46 189.9 114 89.5
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 2.0e-41 174.1 105 80.0
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 7.1e-39 165.6 251 38.2
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 4.8e-27 126.3 180 41.7
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 3.4e-25 120.2 187 37.4
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 6.5e-24 115.9 82 73.2
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 2.5e-23 114.0 90 67.8
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 1.1e-12 78.6 48 87.5
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 7.4e-12 75.9 38 97.4
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.3e-11 75.1 150 40.0
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 2.9e-08 63.9 36 86.1
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 2.9e-08 63.9 288 24.3
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 2.5e-07 60.8 55 54.5


User provided reference genes

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