Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p58430 Brassica napus HOM05D000005 ORTHO05D015478 1.3e-155 553.1 312 100.0
C09p58380 Brassica napus HOM05D000005 ORTHO05D000449 6.5e-118 427.9 256 96.5
BolC9t58697H Brassica oleracea HOM05D000005 ORTHO05D021735 7.0e-80 301.6 306 66.0
BolC9t58701H Brassica oleracea HOM05D000005 ORTHO05D021735 1.5e-77 293.9 323 59.4
C09p58330 Brassica napus HOM05D000005 ORTHO05D021735 2.1e-68 263.5 273 66.7
BraA10t44181Z Brassica rapa HOM05D000005 ORTHO05D021735 5.2e-67 258.8 270 60.7
BcaB08g36685 Brassica carinata HOM05D000005 ORTHO05D021735 9.2e-64 248.1 271 61.3
BcaB08g36683 Brassica carinata HOM05D000005 ORTHO05D000449 2.7e-63 246.5 266 54.9
BcaC04g18696 Brassica carinata HOM05D000005 ORTHO05D021735 1.3e-62 244.2 273 61.2
BcaC04g18699 Brassica carinata HOM05D000005 ORTHO05D000294 2.3e-51 206.8 234 49.6
BcaC04g18695 Brassica carinata HOM05D000005 ORTHO05D000449 9.9e-42 174.9 281 44.8
BcaC04g18704 Brassica carinata HOM05D000005 ORTHO05D015478 1.7e-41 174.1 174 60.9
BcaC04g18707 Brassica carinata HOM05D000005 ORTHO05D013238 2.2e-41 173.7 303 41.3
A10p21180 Brassica napus HOM05D000005 ORTHO05D000449 2.7e-39 166.8 207 50.7
C09p58320 Brassica napus HOM05D000005 ORTHO05D028320 4.3e-37 159.5 226 46.5
BolC9t58704H Brassica oleracea HOM05D000005 ORTHO05D028320 1.6e-36 157.5 226 46.5
C02p09810 Brassica napus HOM05D000005 ORTHO05D000449 2.8e-36 156.8 146 53.4
BolC2t06889H Brassica oleracea HOM05D000005 ORTHO05D000449 2.8e-36 156.8 146 53.4
SpUn0015_0070 Schrenkiella parvula HOM05D000005 ORTHO05D028320 1.8e-35 154.1 144 55.6
Sp6g12570 Schrenkiella parvula HOM05D000005 ORTHO05D000449 6.9e-35 152.1 223 44.4
SpUn0039_0030 Schrenkiella parvula HOM05D000005 ORTHO05D000449 6.9e-35 152.1 223 44.4
A02p04850 Brassica napus HOM05D000005 ORTHO05D000449 3.4e-34 149.8 146 54.8
C02p09830 Brassica napus HOM05D000005 ORTHO05D000449 3.4e-34 149.8 135 56.3
Thhalv10012477m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 3.4e-34 149.8 144 56.2
A02p05030 Brassica napus HOM05D000005 ORTHO05D000449 2.9e-33 146.7 158 51.3
C09p58560 Brassica napus HOM05D022627 ORTHO05D015478 4.9e-33 146.0 131 62.6
CARHR195250 Cardamine hirsuta HOM05D000005 ORTHO05D013238 1.9e-32 144.1 147 51.7
A03p34260 Brassica napus HOM05D004426 ORTHO05D005417 3.2e-32 143.3 156 48.7
SpUn0155_0010 Schrenkiella parvula HOM05D000005 ORTHO05D000449 4.2e-32 142.9 138 53.6
BraA02t05442Z Brassica rapa HOM05D000005 ORTHO05D000449 2.7e-31 140.2 145 53.1
CARHR194700 Cardamine hirsuta HOM05D000005 ORTHO05D000449 2.7e-31 140.2 156 51.9
BcaC03g13587 Brassica carinata HOM05D000005 ORTHO05D000449 7.9e-31 138.7 146 50.0
BolC3t16444H Brassica oleracea HOM05D000005 ORTHO05D000449 7.9e-31 138.7 146 50.7
AT5G18350 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 1.0e-30 138.3 153 48.4
BcaC03g13589 Brassica carinata HOM05D000005 ORTHO05D000449 1.5e-29 134.4 154 51.3
BraA03t12601Z Brassica rapa HOM05D000005 ORTHO05D000449 1.9e-29 134.0 155 46.5
C09p58520 Brassica napus HOM05D000005 ORTHO05D013238 2.5e-29 133.7 144 52.1
Thhalv10015416m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 4.3e-29 132.9 147 46.3
CARHR194670 Cardamine hirsuta HOM05D000005 ORTHO05D000449 7.4e-29 132.1 171 46.2
BcaB05g24569 Brassica carinata HOM05D000005 ORTHO05D000449 2.1e-28 130.6 155 46.5
A02p05300 Brassica napus HOM05D000005 ORTHO05D000449 8.1e-28 128.6 148 48.0
C09p58470 Brassica napus HOM05D000005 ORTHO05D000449 1.8e-27 127.5 147 49.7
CARHR194730 Cardamine hirsuta HOM05D000005 ORTHO05D013238 1.8e-27 127.5 166 42.2
C09p58600 Brassica napus HOM05D022627 ORTHO05D015478 3.1e-27 126.7 84 70.2
C03p41710 Brassica napus HOM05D000005 ORTHO05D013238 9.0e-27 125.2 155 47.1
Thhalv10023827m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 9.0e-27 125.2 112 57.1
A04p06070 Brassica napus HOM05D000005 ORTHO05D000449 3.4e-26 123.2 144 47.2
CARHR179460 Cardamine hirsuta HOM05D000005 ORTHO05D000449 1.1e-24 118.2 145 45.5
BcaB01g04906 Brassica carinata HOM05D000005 ORTHO05D000449 3.2e-24 116.7 145 46.2
C09p58480 Brassica napus HOM05D022627 ORTHO05D015478 4.2e-24 116.3 90 64.4
BcaC03g13593 Brassica carinata HOM05D000005 ORTHO05D000449 1.6e-23 114.4 127 52.0
BraA02t05487Z Brassica rapa HOM05D000005 ORTHO05D000449 1.6e-23 114.4 143 45.5
BcaB05g23375 Brassica carinata HOM05D000005 ORTHO05D000449 3.5e-23 113.2 148 48.0
CARHR255090 Cardamine hirsuta HOM05D000005 ORTHO05D000449 6.0e-23 112.5 220 39.5
A03p08770 Brassica napus HOM05D000005 ORTHO05D000449 2.3e-22 110.5 146 47.3
BraA03t10201Z Brassica rapa HOM05D000005 ORTHO05D000449 3.0e-22 110.2 150 46.0
BolC2t06890H Brassica oleracea HOM05D000005 ORTHO05D028320 1.5e-21 107.8 129 46.5
BraA09t38270Z Brassica rapa HOM05D000005 ORTHO05D013238 2.5e-21 107.1 161 40.4
BolC9t58702H Brassica oleracea HOM05D000005 ORTHO05D015478 3.7e-20 103.2 156 44.2
BcaC04g21214 Brassica carinata HOM05D000005 ORTHO05D013238 6.2e-20 102.4 161 38.5
C09p34280 Brassica napus HOM05D000005 ORTHO05D013238 6.2e-20 102.4 161 38.5
AT5G18370 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 2.4e-19 100.5 173 37.6
BcaB08g36686 Brassica carinata HOM05D000005 ORTHO05D000449 4.0e-19 99.8 138 44.9
BraA02t05446Z Brassica rapa HOM05D000005 ORTHO05D000449 5.3e-19 99.4 177 37.9
BraA10t44142Z Brassica rapa HOM05D000005 ORTHO05D000449 5.8e-18 95.9 195 39.0
C06p08170 Brassica napus HOM05D000005 ORTHO05D040602 7.6e-18 95.5 96 50.0
BolC6t35898H Brassica oleracea HOM05D000005 ORTHO05D040602 7.6e-18 95.5 96 50.0
BraA03t12600Z Brassica rapa HOM05D004426 ORTHO05D005417 7.6e-18 95.5 101 50.5
BcaB05g23320 Brassica carinata HOM05D000005 ORTHO05D000449 2.2e-17 94.0 152 42.1
BcaC05g29959 Brassica carinata HOM05D000005 ORTHO05D000449 2.2e-17 94.0 148 39.2
BcaC05g29960 Brassica carinata HOM05D000005 ORTHO05D000449 1.4e-16 91.3 149 39.6
BraA05t23061Z Brassica rapa HOM05D000005 ORTHO05D000449 1.4e-16 91.3 147 40.1
BolC5t34947H Brassica oleracea HOM05D000005 ORTHO05D000449 1.0e-14 85.1 175 34.9
BcaB04g19347 Brassica carinata HOM05D000005 ORTHO05D000449 1.8e-14 84.3 171 35.1
BcaC05g29962 Brassica carinata HOM05D000005 ORTHO05D000449 6.7e-14 82.4 172 37.2
BcaC05g30212 Brassica carinata HOM05D000005 ORTHO05D000449 6.7e-14 82.4 163 35.6
AL20U10060 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 1.9e-13 80.9 149 35.6
AL20U10040 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 3.3e-13 80.1 146 38.4
BraA04t16311Z Brassica rapa HOM05D000005 ORTHO05D000449 4.3e-13 79.7 133 36.8
Sp3g23450 Schrenkiella parvula HOM05D000005 ORTHO05D000449 5.7e-13 79.3 151 33.8
AL20U10050 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 9.7e-13 78.6 149 36.9
CARHR179240 Cardamine hirsuta HOM05D000005 ORTHO05D000449 9.7e-13 78.6 126 40.5
A03p54700 Brassica napus HOM05D000005 ORTHO05D000449 1.6e-12 77.8 149 36.9
BraA03t14538Z Brassica rapa HOM05D000005 ORTHO05D000449 1.6e-12 77.8 149 36.9
C05p62920 Brassica napus HOM05D000005 ORTHO05D000449 3.7e-12 76.6 163 33.1
AT3G44480 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 4.8e-12 76.3 147 37.4
BcaC05g29961 Brassica carinata HOM05D000005 ORTHO05D000449 4.8e-12 76.3 154 36.4
C05p62940 Brassica napus HOM05D000005 ORTHO05D000449 8.2e-12 75.5 154 36.4
Thhalv10022404m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 8.2e-12 75.5 137 34.3
Carub.0005s1030 Capsella rubella HOM05D000005 ORTHO05D000449 2.4e-11 73.9 147 37.4
A09p18590 Brassica napus HOM05D000005 ORTHO05D000294 3.1e-11 73.6 71 53.5
Carub.0015s0013 Capsella rubella HOM05D000005 ORTHO05D000449 3.1e-11 73.6 147 36.7
AL5G22800 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 4.1e-11 73.2 146 33.6
Carub.0008s0595 Capsella rubella HOM05D000005 ORTHO05D000449 6.9e-11 72.4 146 33.6
Thhalv10019585m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 9.0e-11 72.0 164 34.1
AT3G44400 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 1.2e-10 71.6 141 36.9
AL20U10020 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 1.5e-10 71.2 147 34.7
BcaC09g49199 Brassica carinata HOM05D000005 ORTHO05D032820 1.5e-10 71.2 158 31.0
CARHR272910 Cardamine hirsuta HOM05D000005 ORTHO05D000449 1.5e-10 71.2 162 30.2
C02p10420 Brassica napus HOM05D022627 ORTHO05D015478 2.0e-10 70.9 56 66.1
BolC2t06943H Brassica oleracea HOM05D022627 ORTHO05D015478 2.0e-10 70.9 56 66.1
Aa31LG5G19010 Aethionema arabicum HOM05D000718 ORTHO05D002712 5.9e-10 69.3 146 35.6
AT5G11250 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 5.9e-10 69.3 147 34.0
BraA05t23060Z Brassica rapa HOM05D000005 ORTHO05D000449 1.0e-09 68.6 158 34.2
BcaB03g12117 Brassica carinata HOM05D000005 ORTHO05D016758 1.7e-09 67.8 152 29.6
Carub.0008s0596 Capsella rubella HOM05D000005 ORTHO05D000449 2.9e-09 67.0 146 32.2
CARHR219580 Cardamine hirsuta HOM05D000005 ORTHO05D000449 2.9e-09 67.0 148 32.4
A01p41170 Brassica napus HOM05D000005 ORTHO05D000449 5.0e-09 66.2 146 31.5
BNapus_Darmor_BZH_scaffold_78p00540 Brassica napus HOM05D000005 ORTHO05D000449 5.0e-09 66.2 146 31.5
Carub.0007s3393 Capsella rubella HOM05D000005 ORTHO05D000449 5.0e-09 66.2 164 26.8
A08p15550 Brassica napus HOM05D000005 ORTHO05D000449 1.9e-08 64.3 146 32.2
CARHR212850 Cardamine hirsuta HOM05D000005 ORTHO05D000449 2.5e-08 63.9 151 31.8
Carub.0008s0593 Capsella rubella HOM05D000005 ORTHO05D000449 3.2e-08 63.5 149 34.9
Carub.0008s0591 Capsella rubella HOM05D000005 ORTHO05D000449 5.5e-08 62.8 149 34.9
BcaB02g07887 Brassica carinata HOM05D000005 ORTHO05D000449 7.2e-08 62.4 153 31.4
C05p56490 Brassica napus HOM05D000005 ORTHO05D000449 7.2e-08 62.4 145 30.3
CARHR106050 Cardamine hirsuta HOM05D000005 ORTHO05D000449 7.2e-08 62.4 142 31.7
BcaB03g11720 Brassica carinata HOM05D000005 ORTHO05D000449 9.3e-08 62.0 156 32.7
BolC5t34314H Brassica oleracea HOM05D000005 ORTHO05D000449 9.3e-08 62.0 141 31.2
Carub.0005s1036 Capsella rubella HOM05D000005 ORTHO05D000449 9.3e-08 62.0 149 29.5
Carub.0008s0599 Capsella rubella HOM05D000005 ORTHO05D000449 9.3e-08 62.0 140 33.6
C07p53040 Brassica napus HOM05D000005 ORTHO05D000449 1.2e-07 61.6 153 33.3
Carub.0008s0597 Capsella rubella HOM05D000005 ORTHO05D000449 1.2e-07 61.6 153 32.0
BcaB04g19249 Brassica carinata HOM05D000005 ORTHO05D000449 1.6e-07 61.2 125 32.8
CARHR272920 Cardamine hirsuta HOM05D000005 ORTHO05D000449 1.6e-07 61.2 153 30.7
BcaB01g04619 Brassica carinata HOM05D000005 ORTHO05D000449 2.7e-07 60.5 149 31.5
BcaC09g47772 Brassica carinata HOM05D000005 ORTHO05D000449 3.6e-07 60.1 145 32.4
Carub.0015s0010 Capsella rubella HOM05D000005 ORTHO05D000449 4.6e-07 59.7 162 28.4
BolC1t05781H Brassica oleracea HOM05D000005 ORTHO05D000449 6.1e-07 59.3 142 31.0
BcaB01g04616 Brassica carinata HOM05D000005 ORTHO05D000449 1.8e-06 57.8 148 32.4
C03p13990 Brassica napus HOM05D000005 ORTHO05D000449 1.8e-06 57.8 148 32.4
Carub.0005s1035 Capsella rubella HOM05D000005 ORTHO05D000449 1.8e-06 57.8 142 34.5
BcaB01g04615 Brassica carinata HOM05D000005 ORTHO05D000449 2.3e-06 57.4 148 32.4
BolC3t13846H Brassica oleracea HOM05D000005 ORTHO05D000449 2.3e-06 57.4 148 32.4
AL8G17950 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 3.9e-06 56.6 116 34.5
BcaNung04533 Brassica carinata HOM05D000005 ORTHO05D000449 3.9e-06 56.6 141 32.6
Carub.0002s1620 Capsella rubella HOM05D000005 ORTHO05D000449 3.9e-06 56.6 154 35.1
CARHR194660 Cardamine hirsuta HOM05D000005 ORTHO05D000449 5.1e-06 56.2 45 68.9
AL6G29600 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 6.7e-06 55.8 45 68.9
AT5G18360 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 6.7e-06 55.8 45 68.9
Carub.0007s3771 Capsella rubella HOM05D000005 ORTHO05D000449 6.7e-06 55.8 142 28.2
CARHR194680 Cardamine hirsuta HOM05D000005 ORTHO05D000449 6.7e-06 55.8 45 68.9
Thhalv10023155m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 6.7e-06 55.8 158 28.5
BcaC03g13623 Brassica carinata HOM05D000005 ORTHO05D000449 8.7e-06 55.5 79 39.2
BolC7t45802H Brassica oleracea HOM05D000005 ORTHO05D000449 8.7e-06 55.5 106 36.8


User provided reference genes

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