Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p56610 Brassica napus HOM05D020166 ORTHO05D027473 2.7e-39 164.9 81 100.0
BolC8t47757H Brassica oleracea HOM05D020166 ORTHO05D027473 2.8e-33 144.8 81 90.1
C08p09110 Brassica napus HOM05D020166 ORTHO05D027473 2.4e-32 141.7 81 88.9
BcaC07g37435 Brassica carinata HOM05D020166 ORTHO05D027473 9.5e-13 76.6 40 92.5
C07p03310 Brassica napus HOM05D020166 ORTHO05D041357 1.8e-11 72.4 40 87.5
BolC7t40731H Brassica oleracea HOM05D020166 ORTHO05D041357 1.8e-11 72.4 40 87.5
BcaC06g33120 Brassica carinata HOM05D001027 ORTHO05D000844 1.4e-08 62.8 32 84.4
C07p45540 Brassica napus HOM05D001027 ORTHO05D000844 3.2e-08 61.6 37 75.7
BolC7t45075H Brassica oleracea HOM05D001027 ORTHO05D000844 3.2e-08 61.6 37 75.7
BraA03t13869Z Brassica rapa HOM05D001027 ORTHO05D000844 1.2e-07 59.7 36 75.0
A03p47550 Brassica napus HOM05D001027 ORTHO05D000844 3.5e-07 58.2 32 81.2
A09p09260 Brassica napus HOM05D001027 ORTHO05D000844 1.3e-06 56.2 37 67.6
MD02G1186900 Malus domestica HOM05D001027 ORTHO05D000844 3.0e-06 55.1 32 78.1
Aa31LG1G16130 Aethionema arabicum HOM05D001027 ORTHO05D000844 5.1e-06 54.3 33 72.7
Aa31LG4G18310 Aethionema arabicum HOM05D001027 ORTHO05D000844 5.1e-06 54.3 33 72.7
BcaB04g20043 Brassica carinata HOM05D001027 ORTHO05D000844 5.1e-06 54.3 33 72.7
BcaB05g23168 Brassica carinata HOM05D001027 ORTHO05D000844 5.1e-06 54.3 33 72.7
Cpa.g.sc6.10 Carica papaya HOM05D001027 ORTHO05D000844 5.1e-06 54.3 33 72.7
COL.COLO4_11583 Corchorus olitorius HOM05D001027 ORTHO05D000844 5.1e-06 54.3 33 72.7
Duzib264G0181 Durio zibethinus HOM05D001027 ORTHO05D000844 5.1e-06 54.3 33 72.7
Gohir.A02G151200 Gossypium hirsutum HOM05D001027 ORTHO05D000844 5.1e-06 54.3 33 72.7
Gohir.A11G214400 Gossypium hirsutum HOM05D001027 ORTHO05D000844 5.1e-06 54.3 33 72.7
Gohir.D03G029100 Gossypium hirsutum HOM05D001027 ORTHO05D000844 5.1e-06 54.3 33 72.7
Gohir.D11G209000 Gossypium hirsutum HOM05D001027 ORTHO05D000844 5.1e-06 54.3 33 72.7
Gorai.007G224200 Gossypium raimondii HOM05D001027 ORTHO05D000844 5.1e-06 54.3 33 72.7
Psat4g081560 Pisum sativum HOM05D001027 ORTHO05D000844 5.1e-06 54.3 32 75.0
Thecc.01G073300 Theobroma cacao HOM05D001027 ORTHO05D000844 5.1e-06 54.3 33 72.7
BcaC09g49979 Brassica carinata HOM05D001027 ORTHO05D000844 6.6e-06 53.9 33 72.7
A01p24420 Brassica napus HOM05D001027 ORTHO05D000844 6.6e-06 53.9 33 72.7
C01p30440 Brassica napus HOM05D001027 ORTHO05D000844 6.6e-06 53.9 33 72.7
BolC1t02987H Brassica oleracea HOM05D001027 ORTHO05D000844 6.6e-06 53.9 33 72.7
BraA01t02355Z Brassica rapa HOM05D001027 ORTHO05D000844 6.6e-06 53.9 33 72.7
Manes.13G111100 Manihot esculenta HOM05D001027 ORTHO05D000844 6.6e-06 53.9 32 75.0
Potri.014G004900 Populus trichocarpa HOM05D001027 ORTHO05D000844 6.6e-06 53.9 32 75.0
Sabra14G0004600 Salix brachista HOM05D001027 ORTHO05D000844 6.6e-06 53.9 32 75.0
Sabra14G0004900 Salix brachista HOM05D001027 ORTHO05D000844 6.6e-06 53.9 32 75.0
AL5G29860 Arabidopsis lyrata HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
AL8G43720 Arabidopsis lyrata HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
AT5G67580 Arabidopsis thaliana HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
BcaC04g23236 Brassica carinata HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
BcaNung05860 Brassica carinata HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
BcaNung05862 Brassica carinata HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
BcaNung05864 Brassica carinata HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
A06p32840 Brassica napus HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
C03p59630 Brassica napus HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
C09p10820 Brassica napus HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
BolC3t18225H Brassica oleracea HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
BolC9t53977H Brassica oleracea HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
BraA06t26216Z Brassica rapa HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
BraA09t36579Z Brassica rapa HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
Carub.0005s1621 Capsella rubella HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
Carub.0008s2689 Capsella rubella HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
CARHR280010 Cardamine hirsuta HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
Thhalv10004691m.g Eutrema salsugineum HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7
Potri.007G005000 Populus trichocarpa HOM05D001027 ORTHO05D000844 8.6e-06 53.5 32 75.0
Sp2g29070 Schrenkiella parvula HOM05D001027 ORTHO05D000844 8.6e-06 53.5 33 72.7


User provided reference genes

Program Settings