Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p53350 Brassica napus HOM05D004188 ORTHO05D004445 3.4e-22 107.5 54 100.0
A10p17820 Brassica napus HOM05D004188 ORTHO05D004445 9.8e-22 105.9 54 98.1
BraA10t43861Z Brassica rapa HOM05D004188 ORTHO05D004445 4.8e-21 103.6 54 96.3
BcaB08g36360 Brassica carinata HOM05D004188 ORTHO05D004445 6.3e-21 103.2 54 92.6
BcaC04g19723 Brassica carinata HOM05D004188 ORTHO05D004445 2.3e-15 84.7 54 85.2
C03p12760 Brassica napus HOM05D004188 ORTHO05D004445 4.0e-15 84.0 53 81.1
A03p11070 Brassica napus HOM05D004188 ORTHO05D004445 2.6e-14 81.3 53 79.2
BolC3t13742H Brassica oleracea HOM05D004188 ORTHO05D004445 2.6e-14 81.3 53 79.2
BraA03t10421Z Brassica rapa HOM05D004188 ORTHO05D004445 2.6e-14 81.3 53 79.2
BcaB01g04664 Brassica carinata HOM05D004188 ORTHO05D004445 9.8e-14 79.3 49 81.6
Thhalv10015987m.g Eutrema salsugineum HOM05D004188 ORTHO05D004445 1.3e-13 79.0 52 80.8
Sp6g22190 Schrenkiella parvula HOM05D004188 ORTHO05D004445 5.4e-12 73.6 52 71.2
Carub.0005s1101 Capsella rubella HOM05D004188 ORTHO05D004445 1.5e-09 65.5 57 61.4
AL8G37220 Arabidopsis lyrata HOM05D004188 ORTHO05D004445 3.3e-09 64.3 52 61.5
AL5G23790 Arabidopsis lyrata HOM05D004188 ORTHO05D004445 7.3e-09 63.2 61 55.7
Carub.0008s2131 Capsella rubella HOM05D004188 ORTHO05D004445 7.3e-09 63.2 54 61.1
CARHR150740 Cardamine hirsuta HOM05D004188 ORTHO05D004445 2.1e-08 61.6 52 57.7
AT5G60630 Arabidopsis thaliana HOM05D004188 ORTHO05D004445 2.8e-08 61.2 60 61.7
BcaB01g01101 Brassica carinata HOM05D004188 ORTHO05D004445 2.8e-08 61.2 59 54.2
PGR102G1665 Punica granatum HOM05D004188 ORTHO05D004445 4.7e-08 60.5 53 60.4
BcaC01g01980 Brassica carinata HOM05D004188 ORTHO05D004445 6.1e-08 60.1 59 54.2
A06p21540 Brassica napus HOM05D004188 ORTHO05D004445 6.1e-08 60.1 59 54.2
C03p69850 Brassica napus HOM05D004188 ORTHO05D004445 6.1e-08 60.1 59 54.2
BolC3t19246H Brassica oleracea HOM05D004188 ORTHO05D004445 6.1e-08 60.1 59 54.2
BraA06t25239Z Brassica rapa HOM05D004188 ORTHO05D004445 6.1e-08 60.1 59 54.2
Cfa011320 Carpinus fangiana HOM05D004188 ORTHO05D004445 6.1e-08 60.1 51 64.7
AT3G45230 Arabidopsis thaliana HOM05D004188 ORTHO05D004445 8.0e-08 59.7 61 52.5
MBI07_g19312_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 1.0e-07 59.3 51 62.7
Gohir.D03G134100 Gossypium hirsutum HOM05D004188 ORTHO05D004445 1.4e-07 58.9 51 56.9
THA.LOC104799503 Tarenaya hassleriana HOM05D004188 ORTHO05D004445 1.4e-07 58.9 46 65.2
CANSAT54G2412 Cannabis sativa HOM05D004188 ORTHO05D004445 1.8e-07 58.5 52 57.7
Thhalv10002916m.g Eutrema salsugineum HOM05D004188 ORTHO05D004445 1.8e-07 58.5 46 58.7
Gorai.003G141200 Gossypium raimondii HOM05D004188 ORTHO05D004445 1.8e-07 58.5 51 56.9
Gohir.A03G034200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 2.3e-07 58.2 53 58.5
Manes.04G021600 Manihot esculenta HOM05D004188 ORTHO05D004445 3.1e-07 57.8 48 58.3
Sed0015663 Sechium edule HOM05D004188 ORTHO05D004445 3.1e-07 57.8 45 66.7
arahy.Tifrunner.gnm1.ann1.86U5T6 Arachis hypogaea HOM05D004188 ORTHO05D004445 4.0e-07 57.4 55 60.0
arahy.Tifrunner.gnm1.ann1.D47N05 Arachis hypogaea HOM05D004188 ORTHO05D004445 4.0e-07 57.4 55 60.0
ECA248G2476 Erigeron canadensis HOM05D004188 ORTHO05D004445 4.0e-07 57.4 52 57.7
CiPaw.14G080400 Carya illinoinensis HOM05D004188 ORTHO05D004445 5.2e-07 57.0 51 58.8
TPR.G15542 Trifolium pratense HOM05D004188 ORTHO05D004445 5.2e-07 57.0 50 62.0
EL10Ac9g22513 Beta vulgaris HOM05D004188 ORTHO05D004445 6.8e-07 56.6 49 59.2
Ca_05256_v3 Cicer arietinum L. HOM05D004188 ORTHO05D004445 6.8e-07 56.6 51 58.8
ClCG02G021140 Citrullus lanatus HOM05D004188 ORTHO05D004445 6.8e-07 56.6 55 56.4
MBI10_g41700_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 6.8e-07 56.6 48 58.3
Rhsim01G0217000 Rhododendron simsii HOM05D004188 ORTHO05D004445 6.8e-07 56.6 45 60.0
Rhsim01G0217100 Rhododendron simsii HOM05D004188 ORTHO05D004445 6.8e-07 56.6 45 60.0
Medtr4g059520 Medicago truncatula HOM05D004188 ORTHO05D004445 8.9e-07 56.2 52 59.6
Medtr4g459420 Medicago truncatula HOM05D004188 ORTHO05D004445 8.9e-07 56.2 52 59.6
MELO3C025771.2 Cucumis melo HOM05D004188 ORTHO05D004445 1.2e-06 55.8 55 56.4
CsaV3_6G013900 Cucumis sativus L. HOM05D004188 ORTHO05D004445 1.2e-06 55.8 55 56.4
DCAR_006061 Daucus carota HOM05D004188 ORTHO05D004445 1.2e-06 55.8 46 60.9
Gohir.D05G102200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 1.2e-06 55.8 41 65.9
Gorai.009G106500 Gossypium raimondii HOM05D004188 ORTHO05D004445 1.2e-06 55.8 41 65.9
Lsat_1_v5_gn_1_65340 Lactuca sativa HOM05D004188 ORTHO05D004445 1.5e-06 55.5 41 63.4
Potri.009G013500 Populus trichocarpa HOM05D004188 ORTHO05D004445 1.5e-06 55.5 49 63.3
Nitab4.5_0011114g0020 Nicotiana tabacum HOM05D004188 ORTHO05D004445 2.0e-06 55.1 50 58.0
Potri.004G210300 Populus trichocarpa HOM05D004188 ORTHO05D004445 2.0e-06 55.1 48 58.3
CAN.G631.25 Capsicum annuum HOM05D004188 ORTHO05D004445 2.6e-06 54.7 52 51.9
Lalb_Chr14g0374691 Lupinus albus HOM05D004188 ORTHO05D004445 2.6e-06 54.7 50 58.0
Nitab4.5_0000650g0240 Nicotiana tabacum HOM05D004188 ORTHO05D004445 3.4e-06 54.3 50 58.0
Peaxi162Scf00270g00089 Petunia axillaris HOM05D004188 ORTHO05D004445 3.4e-06 54.3 52 57.7
TWI75G1406 Tripterygium wilfordii HOM05D004188 ORTHO05D004445 3.4e-06 54.3 45 55.6
Actinidia03061 Actinidia chinensis HOM05D004188 ORTHO05D004445 4.4e-06 53.9 44 59.1
Ah.01g014350 Amaranthus hybridus HOM05D004188 ORTHO05D004445 5.8e-06 53.5 47 59.6
Ciclev10029471m.g Citrus clementina HOM05D004188 ORTHO05D004445 5.8e-06 53.5 38 65.8
Duzib170G0015 Durio zibethinus HOM05D004188 ORTHO05D004445 5.8e-06 53.5 47 57.4
Phvul.011G078900 Phaseolus vulgaris HOM05D004188 ORTHO05D004445 7.5e-06 53.1 47 59.6
VMungo1080G0149 Vigna mungo HOM05D004188 ORTHO05D004445 7.5e-06 53.1 54 51.9
MELO3C026856.2 Cucumis melo HOM05D004188 ORTHO05D004445 9.8e-06 52.8 48 54.2
Duzib150G1311 Durio zibethinus HOM05D004188 ORTHO05D004445 9.8e-06 52.8 47 57.4
Duzib168G0960 Durio zibethinus HOM05D004188 ORTHO05D004445 9.8e-06 52.8 44 59.1
Glyma.12G172900 Glycine max HOM05D004188 ORTHO05D004445 9.8e-06 52.8 45 53.3
Lalb_Chr22g0350231 Lupinus albus HOM05D004188 ORTHO05D004445 9.8e-06 52.8 50 58.0
PGSC0003DMG400008124 Solanum tuberosum HOM05D004188 ORTHO05D004445 9.8e-06 52.8 55 49.1


User provided reference genes

Program Settings