Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 3.4e-141 505.0 256 100.0
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 1.3e-140 503.1 256 99.6
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 5.1e-137 491.1 256 96.9
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 2.8e-135 485.3 256 97.3
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 2.8e-135 485.3 256 97.3
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 1.4e-129 466.5 256 93.4
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 5.1e-129 464.5 256 91.4
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 6.7e-129 464.2 255 92.9
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 1.5e-128 463.0 256 91.8
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 9.7e-128 460.3 256 91.4
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 1.7e-127 459.5 240 97.9
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 5.9e-125 451.1 256 89.8
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 1.0e-121 440.3 256 88.3
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 1.5e-120 436.4 251 89.2
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 1.5e-117 426.4 256 84.4
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 1.4e-110 403.3 260 78.8
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 5.9e-109 397.9 257 79.0
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 4.2e-107 391.7 256 78.1
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 1.8e-105 386.3 255 75.3
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 2.3e-105 386.0 255 74.9
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 6.7e-105 384.4 255 74.5
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 1.5e-104 383.3 257 76.3
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 3.3e-104 382.1 254 74.4
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 3.3e-104 382.1 255 76.5
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 4.8e-103 378.3 254 74.8
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 8.2e-103 377.5 256 74.2
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 8.2e-103 377.5 254 76.0
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 1.8e-102 376.3 256 73.8
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 3.1e-102 375.6 205 92.7
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 1.2e-101 373.6 252 75.0
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 1.2e-101 373.6 252 75.0
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 3.5e-101 372.1 254 72.8
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 4.5e-101 371.7 255 74.1
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 1.7e-100 369.8 255 73.7
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.7e-100 369.8 257 71.6
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 1.1e-99 367.1 255 72.5
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 1.1e-99 367.1 253 73.9
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 2.5e-99 365.9 254 72.4
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 3.2e-99 365.5 254 72.8
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 3.2e-99 365.5 255 74.5
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 3.2e-99 365.5 254 71.7
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 5.5e-99 364.8 259 71.4
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 9.4e-99 364.0 252 74.6
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 4.7e-98 361.7 257 72.8
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 6.1e-98 361.3 253 72.3
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 8.0e-98 360.9 257 73.2
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 1.0e-97 360.5 254 72.0
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 1.4e-97 360.1 256 72.7
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.8e-97 359.8 257 73.2
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 2.3e-97 359.4 272 69.5
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 2.3e-97 359.4 254 71.3
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 3.0e-97 359.0 256 70.7
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 5.2e-97 358.2 258 68.6
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 1.2e-96 357.1 252 71.0
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 5.7e-96 354.8 257 72.0
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 2.2e-95 352.8 256 70.3
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 3.7e-95 352.1 256 69.5
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 8.3e-95 350.9 270 69.6
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 1.1e-94 350.5 253 70.0
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.1e-94 350.5 257 72.0
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 1.1e-94 350.5 253 68.8
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 1.8e-94 349.7 226 75.7
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 1.8e-94 349.7 257 68.5
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 2.4e-94 349.4 255 70.2
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 3.1e-94 349.0 253 69.6
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 5.4e-94 348.2 266 69.2
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 9.1e-94 347.4 254 68.5
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 1.2e-93 347.1 252 69.8
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 2.0e-93 346.3 256 70.3
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 4.5e-93 345.1 256 68.0
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 4.5e-93 345.1 257 69.6
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 4.5e-93 345.1 255 69.0
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 1.0e-92 344.0 257 74.7
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 1.3e-92 343.6 258 69.0
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 1.3e-92 343.6 256 68.0
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 1.3e-92 343.6 256 68.0
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 1.7e-92 343.2 258 69.8
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 1.7e-92 343.2 260 68.1
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 2.3e-92 342.8 258 67.4
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 2.9e-92 342.4 258 68.6
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 3.8e-92 342.0 260 68.8
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 1.1e-91 340.5 257 69.3
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 2.5e-91 339.3 255 67.5
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 6.1e-90 334.7 241 69.3
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 1.0e-89 334.0 254 66.9
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 1.8e-89 333.2 280 62.9
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 2.3e-89 332.8 241 67.2
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 3.0e-89 332.4 304 60.5
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 4.0e-89 332.0 254 65.4
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 5.2e-89 331.6 257 66.5
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 2.6e-88 329.3 262 64.9
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 1.3e-87 327.0 260 63.5
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 1.1e-86 323.9 241 68.5
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 1.4e-86 323.6 260 63.1
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 1.8e-86 323.2 246 68.7
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 9.2e-86 320.9 256 61.3
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 2.7e-85 319.3 256 65.6
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 4.3e-83 312.0 240 67.1
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 2.8e-82 309.3 257 61.9
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 1.2e-80 303.9 230 65.2
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 4.9e-79 298.5 256 61.7
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 2.4e-78 296.2 255 59.2
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 6.6e-76 288.1 230 62.2
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 1.5e-75 287.0 167 80.8
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 5.6e-75 285.0 201 70.1
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 1.2e-74 283.9 218 65.1
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 3.6e-74 282.3 207 69.6
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 7.5e-72 274.6 164 79.3
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 2.4e-70 269.6 260 58.5
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 1.3e-68 263.8 210 64.3
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 3.3e-67 259.2 181 71.3
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 4.7e-66 255.4 167 77.8
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 1.2e-64 250.8 186 67.2
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 1.2e-64 250.8 198 64.1
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 2.0e-64 250.0 246 53.7
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 1.9e-59 233.4 253 51.8
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 9.5e-59 231.1 254 50.0
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 1.2e-58 230.7 222 55.9
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 8.1e-58 228.0 222 56.8
Lj2A1030T57 Lonicera japonica HOM05D005643 ORTHO05D006819 1.8e-49 200.3 115 82.6
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 8.7e-44 181.4 101 80.2
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 1.3e-42 177.6 144 66.0
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 1.2e-40 171.0 262 40.1
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 1.7e-39 167.2 144 65.3
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 8.4e-39 164.9 153 56.9
BraA02t05718Z Brassica rapa HOM05D005643 ORTHO05D006819 6.9e-33 145.2 68 98.5
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 9.6e-27 124.8 117 53.8
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 1.6e-26 124.0 93 64.5
Cpa.g.sc216.17 Carica papaya HOM05D005643 ORTHO05D006819 3.8e-23 112.8 57 87.7
SHI06095 Sapria himalayana HOM05D005643 ORTHO05D006819 4.3e-19 99.4 72 62.5
ClCG02G021090 Citrullus lanatus HOM05D005643 ORTHO05D006819 2.0e-16 90.5 72 69.4
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 2.9e-15 86.7 79 59.5
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 3.8e-15 86.3 78 59.0
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 3.9e-12 76.3 73 58.9
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.1e-11 74.7 73 53.4
SHI06094 Sapria himalayana HOM05D000105 ORTHO05D000023 2.0e-11 73.9 60 68.3
Rhsim13G0093600 Rhododendron simsii HOM05D000699 ORTHO05D000519 4.1e-09 66.2 53 60.4
MBI07_g43742_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 3.2e-06 56.6 77 48.1


User provided reference genes

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