Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p50860 Brassica napus HOM05D005251 ORTHO05D006680 1.9e-133 479.2 237 100.0
C09p48540 Brassica napus HOM05D005251 ORTHO05D006680 3.7e-89 332.0 171 94.7
BcaC04g20043 Brassica carinata HOM05D005251 ORTHO05D006680 1.4e-88 330.1 171 94.2
BolC9t57695H Brassica oleracea HOM05D005251 ORTHO05D006680 1.4e-88 330.1 171 94.2
BcaB08g36046 Brassica carinata HOM05D005251 ORTHO05D006680 6.5e-86 321.2 173 91.9
Thhalv10013022m.g Eutrema salsugineum HOM05D005251 ORTHO05D006680 9.1e-80 300.8 177 83.6
AL8G32750 Arabidopsis lyrata HOM05D005251 ORTHO05D006680 2.0e-79 299.7 171 86.0
A10p14170 Brassica napus HOM05D005251 ORTHO05D006680 5.0e-78 295.0 201 75.1
AT5G56900 Arabidopsis thaliana HOM05D005251 ORTHO05D006680 1.1e-77 293.9 171 83.6
Sp6g18620 Schrenkiella parvula HOM05D005251 ORTHO05D006680 2.5e-77 292.7 171 83.0
BraA10t43510Z Brassica rapa HOM05D005251 ORTHO05D006680 1.8e-75 286.6 196 75.0
THA.LOC104817759 Tarenaya hassleriana HOM05D005251 ORTHO05D006680 1.5e-69 266.9 172 76.7
Carub.0008s1736 Capsella rubella HOM05D005251 ORTHO05D006680 3.2e-69 265.8 171 80.1
Aa31LG3G12780 Aethionema arabicum HOM05D005251 ORTHO05D006680 9.4e-69 264.2 181 72.9
TWI34G0442 Tripterygium wilfordii HOM05D005251 ORTHO05D006680 8.8e-67 257.7 172 71.5
Gohir.D06G071400 Gossypium hirsutum HOM05D005251 ORTHO05D006680 4.8e-65 251.9 172 70.3
Gorai.010G083200 Gossypium raimondii HOM05D005251 ORTHO05D006680 8.3e-65 251.1 172 70.3
Gohir.A06G072900 Gossypium hirsutum HOM05D005251 ORTHO05D006680 1.1e-64 250.8 172 70.3
CSS0048193 Camellia sinensis var. sinensis HOM05D005251 ORTHO05D006680 1.8e-64 250.0 172 70.3
Manes.03G034200 Manihot esculenta HOM05D005251 ORTHO05D006680 3.1e-64 249.2 172 70.9
Potri.006G152100 Populus trichocarpa HOM05D005251 ORTHO05D006680 1.2e-63 247.3 175 69.7
PGR142G3350 Punica granatum HOM05D005251 ORTHO05D006680 1.2e-63 247.3 171 67.8
BcaNung02827 Brassica carinata HOM05D005251 ORTHO05D006680 4.5e-63 245.4 167 76.6
BcaNung03955 Brassica carinata HOM05D005251 ORTHO05D006680 4.5e-63 245.4 167 76.6
Eucgr.C00887 Eucalyptus grandis HOM05D005251 ORTHO05D006680 4.5e-63 245.4 172 66.3
Duzib150G0576 Durio zibethinus HOM05D005251 ORTHO05D006680 5.9e-63 245.0 172 68.6
CSS0047543 Camellia sinensis var. sinensis HOM05D005251 ORTHO05D006680 7.7e-63 244.6 172 69.2
Thecc.09G088600 Theobroma cacao HOM05D005251 ORTHO05D006680 1.0e-62 244.2 172 67.4
Glyma.17G054700 Glycine max HOM05D005251 ORTHO05D006680 8.5e-62 241.1 172 68.6
Lj4g0006207 Lotus japonicus HOM05D005251 ORTHO05D006680 1.1e-61 240.7 172 66.9
Dinv36771 Davidia involucrata HOM05D005251 ORTHO05D006680 2.5e-61 239.6 172 65.7
Sed0019984 Sechium edule HOM05D005251 ORTHO05D006680 2.5e-61 239.6 172 66.9
Cpa.g.sc61.41 Carica papaya HOM05D005251 ORTHO05D006680 3.2e-61 239.2 172 68.6
CiPaw.03G215300 Carya illinoinensis HOM05D005251 ORTHO05D006680 3.2e-61 239.2 164 70.1
Psat4g015200 Pisum sativum HOM05D005251 ORTHO05D006680 1.6e-60 236.9 172 65.7
Sc18g0002110 Simmondsia chinensis HOM05D005251 ORTHO05D006680 1.6e-60 236.9 172 64.5
Prupe.7G209200 Prunus persica HOM05D005251 ORTHO05D006680 2.1e-60 236.5 172 65.1
MSTRG.10560 Avicennia marina HOM05D005251 ORTHO05D006680 2.7e-60 236.1 172 67.4
Ciclev10010506m.g Citrus clementina HOM05D005251 ORTHO05D006680 6.1e-60 235.0 172 69.2
Glyma.13G104400 Glycine max HOM05D005251 ORTHO05D006680 8.0e-60 234.6 178 64.6
TAR624G0724 Trochodendron aralioides HOM05D005251 ORTHO05D006680 1.0e-59 234.2 171 66.1
Medtr4g126260 Medicago truncatula HOM05D005251 ORTHO05D006680 1.4e-59 233.8 173 67.6
ECA232G2798 Erigeron canadensis HOM05D005251 ORTHO05D006680 2.3e-59 233.0 172 62.8
PSO210G1153 Papaver somniferum HOM05D005251 ORTHO05D006680 3.0e-59 232.6 172 65.1
CsaV3_1G040480 Cucumis sativus L. HOM05D005251 ORTHO05D006680 4.0e-59 232.3 172 66.3
MELO3C015476.2 Cucumis melo HOM05D005251 ORTHO05D006680 5.2e-59 231.9 172 66.3
Cc06_g11450 Coffea canephora HOM05D005251 ORTHO05D006680 6.8e-59 231.5 171 67.3
FvH4_1g07540 Fragaria vesca HOM05D005251 ORTHO05D006680 1.2e-58 230.7 179 63.7
Nn8g38856 Nelumbo nucifera HOM05D005251 ORTHO05D006680 2.6e-58 229.6 172 64.5
Migut.L01497 Erythranthe guttata HOM05D005251 ORTHO05D006680 4.4e-58 228.8 172 65.1
PSO210G7113 Papaver somniferum HOM05D005251 ORTHO05D006680 5.7e-58 228.4 172 64.0
Actinidia39715 Actinidia chinensis HOM05D005251 ORTHO05D006680 1.7e-57 226.9 172 63.4
Rhsim05G0020500 Rhododendron simsii HOM05D005251 ORTHO05D006680 1.7e-57 226.9 175 64.6
Haze_25916 Corylus avellana HOM05D005251 ORTHO05D006680 2.2e-57 226.5 172 67.4
Phvul.003G136700 Phaseolus vulgaris HOM05D005251 ORTHO05D006680 2.8e-57 226.1 172 63.4
TPR.G9472 Trifolium pratense HOM05D005251 ORTHO05D006680 3.7e-57 225.7 188 62.2
Sabra06G0120400 Salix brachista HOM05D005251 ORTHO05D006680 6.3e-57 224.9 176 65.9
PGSC0003DMG400000278 Solanum tuberosum HOM05D005251 ORTHO05D006680 1.6e-55 220.3 172 64.0
Atru.BG.14.p Acer truncatum HOM05D005251 ORTHO05D006680 2.0e-55 219.9 172 64.5
RcHm_v2.0_Chr2g0093421 Rosa chinensis HOM05D005251 ORTHO05D006680 3.5e-55 219.2 179 62.6
GSVIVG01015197001 Vitis vinifera HOM05D005251 ORTHO05D006680 4.5e-55 218.8 171 64.3
EL10Ac8g19209 Beta vulgaris HOM05D005251 ORTHO05D006680 1.7e-54 216.9 172 64.5
BolC9t57946H Brassica oleracea HOM05D005251 ORTHO05D006680 2.3e-54 216.5 107 98.1
Aqoxy7G04044 Aquilegia oxysepala HOM05D005251 ORTHO05D006680 3.8e-54 215.7 172 59.9
AUR62029068 Chenopodium quinoa HOM05D005251 ORTHO05D006680 5.0e-54 215.3 172 63.4
Cfa003082 Carpinus fangiana HOM05D005251 ORTHO05D006680 8.6e-54 214.5 166 66.3
Ah.09g228240 Amaranthus hybridus HOM05D005251 ORTHO05D006680 1.9e-53 213.4 172 62.2
FAN26G3339 Fragaria x ananassa HOM05D005251 ORTHO05D006680 4.2e-53 212.2 179 61.5
MD02G1080200 Malus domestica HOM05D005251 ORTHO05D006680 5.5e-53 211.8 180 60.6
FAN19G0073 Fragaria x ananassa HOM05D005251 ORTHO05D006680 7.2e-53 211.5 179 61.5
QL02p062545 Quercus lobata HOM05D005251 ORTHO05D006680 2.1e-52 209.9 183 59.6
FAN26G1479 Fragaria x ananassa HOM05D005251 ORTHO05D006680 2.8e-52 209.5 179 60.9
FAN28G0072 Fragaria x ananassa HOM05D005251 ORTHO05D006680 2.8e-52 209.5 179 59.8
HanXRQChr06g0178551 Helianthus annuus HOM05D005251 ORTHO05D006680 2.8e-52 209.5 176 59.7
FAN23G1060 Fragaria x ananassa HOM05D005251 ORTHO05D006680 1.0e-51 207.6 179 59.2
AUR62033961 Chenopodium quinoa HOM05D005251 ORTHO05D006680 2.3e-51 206.5 161 60.9
Ca_21279_v3 Cicer arietinum L. HOM05D005251 ORTHO05D006680 8.9e-51 204.5 161 62.1
arahy.Tifrunner.gnm1.ann1.V18GKH Arachis hypogaea HOM05D005251 ORTHO05D006680 2.0e-50 203.4 141 69.5
arahy.Tifrunner.gnm1.ann1.Y01GTZ Arachis hypogaea HOM05D005251 ORTHO05D006680 2.0e-50 203.4 158 65.2
CAN.G1241.24 Capsicum annuum HOM05D005251 ORTHO05D006680 3.4e-50 202.6 194 55.7
ClCG03G015560 Citrullus lanatus HOM05D005251 ORTHO05D006680 1.7e-49 200.3 170 61.2
Lj4A303G24 Lonicera japonica HOM05D005251 ORTHO05D006680 2.2e-49 199.9 135 67.4
CANSAT56G1459 Cannabis sativa HOM05D005251 ORTHO05D006680 5.4e-48 195.3 138 68.1
Sopen12g003810 Solanum pennellii HOM05D005251 ORTHO05D006680 1.3e-46 190.7 141 66.0
Lalb_Chr12g0199801 Lupinus albus HOM05D005251 ORTHO05D006680 1.7e-46 190.3 142 62.7
C06p07120 Brassica napus HOM05D005251 ORTHO05D006680 8.6e-46 188.0 96 95.8
C07p41650 Brassica napus HOM05D005251 ORTHO05D019858 7.3e-45 184.9 95 95.8
MD15G1207700 Malus domestica HOM05D005251 ORTHO05D006680 2.8e-44 183.0 134 64.2
Os09g0364000 Oryza sativa ssp. japonica HOM05D005251 ORTHO05D006680 4.7e-44 182.2 169 55.6
MBI04_g31157_MAGBIO Magnolia biondii HOM05D005251 ORTHO05D006680 1.8e-43 180.3 156 54.5
VMungo1215G2738 Vigna mungo HOM05D005251 ORTHO05D006680 1.5e-42 177.2 178 55.1
Oeu018416.2 Olea europaea HOM05D005251 ORTHO05D006680 5.8e-42 175.3 194 51.0
AagrBONN_evm.TU.Sc2ySwM_228.1764 Anthoceros agrestis HOM05D005251 ORTHO05D006680 8.6e-38 161.4 169 49.7
HPP92_009143 Vanilla planifolia HOM05D005251 ORTHO05D006680 1.1e-37 161.0 122 61.5
COL.COLO4_18196 Corchorus olitorius HOM05D005251 ORTHO05D006680 3.3e-37 159.5 103 69.9
Mapoly0009s0116 Marchantia polymorpha HOM05D005251 ORTHO05D006680 9.5e-37 157.9 169 45.6
SGA_v2.0_scaffold21G09392 Striga asiatica HOM05D005251 ORTHO05D006680 1.2e-36 157.5 98 73.5
Pp3c16_14300 Physcomitrium patens HOM05D005251 ORTHO05D006680 5.2e-35 152.1 169 47.3
BolC7t44699H Brassica oleracea HOM05D005251 ORTHO05D019858 6.8e-35 151.8 78 94.9
Lsat_1_v5_gn_8_87701 Lactuca sativa HOM05D005251 ORTHO05D006680 3.4e-34 149.4 100 66.0
BcaNung02829 Brassica carinata HOM05D005251 ORTHO05D019858 1.7e-33 147.1 76 93.4
SMO273G0018 Selaginella moellendorffii HOM05D005251 ORTHO05D006680 1.4e-32 144.1 167 43.7
Solyc12g008890.3 Solanum lycopersicum HOM05D005251 ORTHO05D006680 1.9e-32 143.7 98 66.3
unitig_8.g4690 Utricularia gibba HOM05D005251 ORTHO05D006680 3.2e-32 142.9 94 68.1
ATR0789G123 Amborella trichopoda HOM05D005251 ORTHO05D006680 7.6e-26 121.7 98 58.2
vmacro17242 Vaccinium macrocarpon HOM05D005251 ORTHO05D006680 1.7e-25 120.6 77 68.8
C07p41630 Brassica napus HOM05D008255 ORTHO05D011943 1.4e-19 100.9 61 80.3
C06p07130 Brassica napus HOM05D005251 ORTHO05D006680 2.4e-19 100.1 75 70.7
SMO147G0126 Selaginella moellendorffii HOM05D005251 ORTHO05D006680 5.8e-18 95.5 108 43.5
Cre07.g338900 Chlamydomonas reinhardtii HOM05D005251 ORTHO05D006680 1.0e-14 84.7 187 33.7
Duzib168G1322 Durio zibethinus HOM05D005251 ORTHO05D006680 9.0e-11 71.6 96 43.8
MCO16G282 Micromonas commoda HOM05D005251 ORTHO05D006680 1.9e-08 63.9 169 30.8
SalBow5G3528 Salvia bowleyana HOM05D000147 ORTHO05D005311 2.4e-08 63.5 38 71.1
BolC6t35802H Brassica oleracea HOM05D005251 ORTHO05D006680 4.2e-08 62.8 33 87.9
CBR_g54012 Chara braunii HOM05D005251 ORTHO05D006680 5.4e-08 62.4 93 38.7
Actinidia25250 Actinidia chinensis HOM05D005251 ORTHO05D006680 3.5e-07 59.7 39 69.2


User provided reference genes

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