Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 4.0e-55 218.8 153 100.0
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 4.0e-55 218.8 153 100.0
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 1.3e-53 213.8 155 98.7
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 1.3e-40 170.6 153 83.0
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 2.1e-40 169.9 153 82.4
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 9.3e-36 154.5 158 75.3
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 2.7e-35 152.9 153 74.5
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 7.9e-35 151.4 153 79.1
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 1.0e-34 151.0 99 82.8
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 5.1e-34 148.7 106 76.4
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 5.7e-33 145.2 153 75.2
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 2.8e-32 142.9 110 73.6
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 8.2e-32 141.4 102 76.5
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 1.8e-31 140.2 108 74.1
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 4.1e-31 139.0 103 76.7
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 3.2e-28 129.4 99 68.7
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 7.1e-28 128.3 103 68.9
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 9.3e-28 127.9 103 69.9
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 1.2e-27 127.5 103 68.0
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 2.1e-27 126.7 62 98.4
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 2.1e-27 126.7 62 98.4
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 2.1e-27 126.7 104 68.3
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 4.6e-27 125.6 100 70.0
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 6.1e-27 125.2 104 71.2
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 1.0e-26 124.4 99 70.7
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 2.3e-26 123.2 105 65.7
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 6.7e-26 121.7 102 67.6
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 8.7e-26 121.3 102 69.6
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 1.1e-25 120.9 99 69.7
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 3.3e-25 119.4 98 68.4
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 3.3e-25 119.4 103 65.0
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 4.3e-25 119.0 108 63.0
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 5.7e-25 118.6 101 64.4
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 7.4e-25 118.2 99 66.7
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 9.7e-25 117.9 104 64.4
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 1.3e-24 117.5 110 60.9
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 1.6e-24 117.1 63 87.3
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 1.6e-24 117.1 100 65.0
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 2.8e-24 116.3 106 64.2
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 2.8e-24 116.3 107 59.8
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 3.7e-24 115.9 103 65.0
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 4.8e-24 115.5 106 63.2
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 4.8e-24 115.5 106 64.2
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 6.3e-24 115.2 66 89.4
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 6.3e-24 115.2 89 67.4
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 8.2e-24 114.8 105 61.9
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 8.2e-24 114.8 99 65.7
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 2.4e-23 113.2 104 62.5
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 3.1e-23 112.8 72 81.9
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 3.1e-23 112.8 102 62.7
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 3.1e-23 112.8 104 62.5
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 4.1e-23 112.5 103 58.3
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 9.0e-23 111.3 104 62.5
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.5e-22 110.5 102 59.8
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 2.0e-22 110.2 102 63.7
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 2.0e-22 110.2 73 76.7
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 2.6e-22 109.8 58 91.4
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 2.6e-22 109.8 107 57.0
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 3.4e-22 109.4 72 77.8
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 4.5e-22 109.0 103 62.1
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 5.9e-22 108.6 99 62.6
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 1.3e-21 107.5 102 60.8
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 1.3e-21 107.5 96 63.5
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 1.3e-21 107.5 97 62.9
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 2.2e-21 106.7 80 71.2
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 2.2e-21 106.7 102 61.8
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 2.9e-21 106.3 63 84.1
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 6.5e-21 105.1 94 60.6
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 6.5e-21 105.1 63 79.4
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 1.1e-20 104.4 112 58.0
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 1.4e-20 104.0 100 59.0
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 2.5e-20 103.2 100 61.0
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 4.2e-20 102.4 109 56.9
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 4.2e-20 102.4 112 56.2
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 5.5e-20 102.1 102 59.8
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 5.5e-20 102.1 66 75.8
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 7.2e-20 101.7 104 56.7
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 9.4e-20 101.3 53 90.6
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 9.4e-20 101.3 99 59.6
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 1.2e-19 100.9 63 77.8
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 2.1e-19 100.1 63 76.2
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 3.6e-19 99.4 55 85.5
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 3.6e-19 99.4 90 63.3
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 6.1e-19 98.6 59 81.4
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 3.0e-18 96.3 98 57.1
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 3.0e-18 96.3 102 54.9
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 3.9e-18 95.9 87 64.4
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 8.8e-18 94.7 107 54.2
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 4.3e-17 92.4 90 62.2
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 1.3e-16 90.9 66 66.7
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 1.1e-15 87.8 63 66.7
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 1.8e-15 87.0 67 67.2
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 9.1e-15 84.7 109 49.5
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 6.5e-13 78.6 107 47.7
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 2.0e-09 67.0 84 46.4


User provided reference genes

Program Settings