Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p40410 Brassica napus HOM05D006976 ORTHO05D008761 1.5e-28 128.6 58 100.0
AL2G21560 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 1.1e-26 122.5 55 98.2
BcaC03g16543 Brassica carinata HOM05D006976 ORTHO05D008761 1.1e-26 122.5 56 96.4
C09p40240 Brassica napus HOM05D006976 ORTHO05D008761 1.1e-26 122.5 56 96.4
BolSC35t60647H Brassica oleracea HOM05D006976 ORTHO05D008761 1.1e-26 122.5 56 96.4
BolSC35t60749H Brassica oleracea HOM05D006976 ORTHO05D008761 1.1e-26 122.5 56 96.4
BolSC46t61034H Brassica oleracea HOM05D006976 ORTHO05D008761 1.1e-26 122.5 56 96.4
BolSC49t61182H Brassica oleracea HOM05D006976 ORTHO05D008761 1.1e-26 122.5 56 96.4
BraSC25t45865Z Brassica rapa HOM05D006976 ORTHO05D008761 1.1e-26 122.5 56 96.4
BraSC59t46590Z Brassica rapa HOM05D006976 ORTHO05D008761 1.1e-26 122.5 56 96.4
CARHR282110 Cardamine hirsuta HOM05D006976 ORTHO05D008761 1.2e-25 119.0 54 96.3
Thhalv10010976m.g Eutrema salsugineum HOM05D006976 ORTHO05D008761 1.2e-25 119.0 56 94.6
ATCG00530 Arabidopsis thaliana HOM05D006976 ORTHO05D008761 2.0e-25 118.2 54 96.3
BraA06t25422Z Brassica rapa HOM05D006976 ORTHO05D008761 3.0e-24 114.4 57 91.2
A06p23180 Brassica napus HOM05D006976 ORTHO05D008761 3.1e-21 104.4 47 95.7
BolC9t56930H Brassica oleracea HOM05D006976 ORTHO05D008761 3.1e-21 104.4 54 87.0
C02p43530 Brassica napus HOM05D006976 ORTHO05D008761 1.4e-18 95.5 54 75.9
HanXRQChr08g0209641 Helianthus annuus HOM05D006976 ORTHO05D008761 3.2e-18 94.4 56 73.2
Gohir.A01G204050 Gossypium hirsutum HOM05D006976 ORTHO05D008761 5.4e-18 93.6 56 75.0
Gohir.D01G101878 Gossypium hirsutum HOM05D006976 ORTHO05D008761 5.4e-18 93.6 56 75.0
BolSC47t61096H Brassica oleracea HOM05D006976 ORTHO05D008761 1.2e-17 92.4 55 74.5
GSVIVG01030620001 Vitis vinifera HOM05D006976 ORTHO05D008761 1.2e-17 92.4 56 71.4
Eucgr.E01114 Eucalyptus grandis HOM05D006976 ORTHO05D008761 1.6e-17 92.0 56 73.2
Hma1.2p1_1409F.1_g281660 Hydrangea macrophylla HOM05D006976 ORTHO05D008761 2.7e-17 91.3 56 71.4
Eucgr.E02607 Eucalyptus grandis HOM05D006976 ORTHO05D008761 4.6e-17 90.5 56 71.4
Nn2g14969 Nelumbo nucifera HOM05D006976 ORTHO05D008761 4.6e-17 90.5 56 73.2
TAR633G2101 Trochodendron aralioides HOM05D006976 ORTHO05D008761 4.6e-17 90.5 56 71.4
HanXRQChr01g0020351 Helianthus annuus HOM05D006976 ORTHO05D008761 6.0e-17 90.1 56 69.6
HanXRQChr10g0283561 Helianthus annuus HOM05D006976 ORTHO05D008761 6.0e-17 90.1 56 69.6
HanXRQChr10g0284251 Helianthus annuus HOM05D006976 ORTHO05D008761 6.0e-17 90.1 56 69.6
HanXRQChr10g0289271 Helianthus annuus HOM05D006976 ORTHO05D008761 6.0e-17 90.1 56 69.6
HanXRQChr10g0318191 Helianthus annuus HOM05D006976 ORTHO05D008761 6.0e-17 90.1 56 69.6
HanXRQChr11g0326831 Helianthus annuus HOM05D006976 ORTHO05D008761 6.0e-17 90.1 56 69.6
HanXRQChr13g0421821 Helianthus annuus HOM05D006976 ORTHO05D008761 6.0e-17 90.1 56 69.6
HanXRQChr16g0528991 Helianthus annuus HOM05D006976 ORTHO05D008761 6.0e-17 90.1 56 69.6
HanXRQChr17g0548241 Helianthus annuus HOM05D006976 ORTHO05D008761 6.0e-17 90.1 56 69.6
HanXRQCPg0580041 Helianthus annuus HOM05D006976 ORTHO05D008761 6.0e-17 90.1 56 69.6
Lj1P303T18 Lonicera japonica HOM05D006976 ORTHO05D008761 7.8e-17 89.7 56 67.9
HanXRQChr15g0497531 Helianthus annuus HOM05D006976 ORTHO05D008761 1.3e-16 89.0 56 67.9
PGR111G0047 Punica granatum HOM05D006976 ORTHO05D008761 1.3e-16 89.0 54 72.2
Nn010s41437 Nelumbo nucifera HOM05D006976 ORTHO05D008761 1.7e-16 88.6 54 74.1
HanXRQChr11g0345161 Helianthus annuus HOM05D006976 ORTHO05D008761 3.0e-16 87.8 56 67.9
GSVIVG01029875001 Vitis vinifera HOM05D006976 ORTHO05D008761 3.0e-16 87.8 54 70.4
Lalb_Chr23g0274511 Lupinus albus HOM05D006976 ORTHO05D008761 3.9e-16 87.4 54 74.1
Lj2P1239T139 Lonicera japonica HOM05D006976 ORTHO05D008761 5.0e-16 87.0 56 66.1
Sed0001172 Sechium edule HOM05D006976 ORTHO05D008761 5.0e-16 87.0 56 67.9
Peaxi162Scf00021g00087 Petunia axillaris HOM05D000806 ORTHO05D002324 1.5e-15 85.5 56 66.1
Oeu028777.1 Olea europaea HOM05D000806 ORTHO05D002324 2.5e-15 84.7 56 66.1
Hund28750 Selenicereus undatus HOM05D006976 ORTHO05D008761 2.5e-15 84.7 55 67.3
Sc03g0010000 Simmondsia chinensis HOM05D006976 ORTHO05D008761 4.3e-15 84.0 56 64.3
Potri.013G162300 Populus trichocarpa HOM05D006976 ORTHO05D008761 7.3e-15 83.2 54 66.7
DCAR_032496 Daucus carota HOM05D006976 ORTHO05D008761 9.5e-15 82.8 56 64.3
Medtr5g019520 Medicago truncatula HOM05D006976 ORTHO05D008761 9.5e-15 82.8 56 67.9
Hund07993 Selenicereus undatus HOM05D000806 ORTHO05D002324 9.5e-15 82.8 53 67.9
Hund29806 Selenicereus undatus HOM05D000806 ORTHO05D002324 9.5e-15 82.8 53 67.9
CAN.G129.10 Capsicum annuum HOM05D006976 ORTHO05D008761 1.6e-14 82.0 56 64.3
RcHm_v2.0_CPg0502081 Rosa chinensis HOM05D006976 ORTHO05D008761 1.6e-14 82.0 56 66.1
arahy.Tifrunner.gnm1.ann1.Z0BJS7 Arachis hypogaea HOM05D000806 ORTHO05D002324 2.1e-14 81.6 54 68.5
Potri.016G094100 Populus trichocarpa HOM05D006976 ORTHO05D008761 2.1e-14 81.6 54 64.8
Solyc00g500020.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 4.7e-14 80.5 56 62.5
Solyc00g500067.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 4.7e-14 80.5 56 62.5
CAN.G232.11 Capsicum annuum HOM05D006976 ORTHO05D008761 1.1e-13 79.3 56 62.5
Psat0s2288g0200 Pisum sativum HOM05D006976 ORTHO05D008761 2.3e-13 78.2 56 62.5
Psat0s2754g0120 Pisum sativum HOM05D000806 ORTHO05D002324 2.3e-13 78.2 56 62.5
AL2G20664 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 6.8e-13 76.6 56 66.1
PSO548G0011 Papaver somniferum HOM05D006976 ORTHO05D008761 6.8e-13 76.6 56 57.1
SalBow1G3572 Salvia bowleyana HOM05D006976 ORTHO05D008761 5.8e-12 73.6 56 58.9
Oeu039082.1 Olea europaea HOM05D006976 ORTHO05D008761 1.3e-11 72.4 56 58.9
CAN.G16.7 Capsicum annuum HOM05D006976 ORTHO05D008761 3.7e-11 70.9 54 55.6
Gorai.001G104700 Gossypium raimondii HOM05D006976 ORTHO05D008761 1.1e-10 69.3 42 71.4
Phvul.002G278108 Phaseolus vulgaris HOM05D006976 ORTHO05D008761 2.4e-10 68.2 53 56.6
MD10G1104000 Malus domestica HOM05D006976 ORTHO05D008761 3.2e-10 67.8 56 60.7
Gohir.D07G097266 Gossypium hirsutum HOM05D006976 ORTHO05D008761 1.6e-09 65.5 38 71.1
HPP92_022279 Vanilla planifolia HOM05D006976 ORTHO05D008761 1.6e-09 65.5 58 56.9
HPP92_028424 Vanilla planifolia HOM05D006976 ORTHO05D008761 1.6e-09 65.5 58 56.9
Nitab4.5_0002181g0020 Nicotiana tabacum HOM05D006976 ORTHO05D008761 5.1e-08 60.5 40 60.0
Oeu062852.1 Olea europaea HOM05D006976 ORTHO05D008761 9.5e-07 56.2 36 61.1


User provided reference genes

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