Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p35140 Brassica napus HOM05D007086 ORTHO05D008927 1.2e-35 152.5 74 100.0
BolC9t56360H Brassica oleracea HOM05D007086 ORTHO05D008927 1.2e-35 152.5 74 100.0
Thhalv10029420m.g Eutrema salsugineum HOM05D007086 ORTHO05D008927 1.1e-10 69.7 71 50.7
CARHR048860 Cardamine hirsuta HOM05D007086 ORTHO05D008927 2.6e-09 65.1 71 50.7
Aa31LG1G2230 Aethionema arabicum HOM05D007086 ORTHO05D008927 1.7e-08 62.4 70 45.7
Rhsim07G0100800 Rhododendron simsii HOM05D007086 ORTHO05D008927 3.8e-08 61.2 69 46.4
AT1G62886 Arabidopsis thaliana HOM05D007086 ORTHO05D008927 4.9e-08 60.8 70 45.7
CARHR012690 Cardamine hirsuta HOM05D007086 ORTHO05D008927 4.9e-08 60.8 71 42.3
AL2G12840 Arabidopsis lyrata HOM05D007086 ORTHO05D008927 8.4e-08 60.1 70 45.7
Thhalv10009271m.g Eutrema salsugineum HOM05D007086 ORTHO05D008927 1.1e-07 59.7 70 42.9
Os07g0573600 Oryza sativa ssp. japonica HOM05D007086 ORTHO05D008927 1.1e-07 59.7 70 45.7
AL1G23730 Arabidopsis lyrata HOM05D007086 ORTHO05D008927 1.4e-07 59.3 71 42.3
CDE11G0364 Ceratophyllum demersum HOM05D007086 ORTHO05D008927 1.4e-07 59.3 69 44.9
THA.LOC104809439 Tarenaya hassleriana HOM05D007086 ORTHO05D008927 1.4e-07 59.3 70 44.3
AT1G12400 Arabidopsis thaliana HOM05D007086 ORTHO05D008927 1.9e-07 58.9 71 40.8
Carub.0001s1205 Capsella rubella HOM05D007086 ORTHO05D008927 1.9e-07 58.9 71 40.8
MD04G1245800 Malus domestica HOM05D007086 ORTHO05D008927 1.9e-07 58.9 70 42.9
MD12G1192500 Malus domestica HOM05D007086 ORTHO05D008927 1.9e-07 58.9 70 42.9
Os05g0198700 Oryza sativa ssp. japonica HOM05D007086 ORTHO05D008927 1.9e-07 58.9 70 45.7
Sp1g11000 Schrenkiella parvula HOM05D007086 ORTHO05D008927 1.9e-07 58.9 70 41.4
Thhalv10023898m.g Eutrema salsugineum HOM05D007086 ORTHO05D008927 2.5e-07 58.5 81 42.0
Actinidia05249 Actinidia chinensis HOM05D001611 ORTHO05D001464 3.2e-07 58.2 69 42.0
Thecc.03G263200 Theobroma cacao HOM05D007086 ORTHO05D008927 5.5e-07 57.4 70 42.9
BolC5t29822H Brassica oleracea HOM05D007086 ORTHO05D008927 7.1e-07 57.0 70 38.6
BraA06t24109Z Brassica rapa HOM05D007086 ORTHO05D008927 7.1e-07 57.0 70 38.6
ClCG00G001010 Citrullus lanatus HOM05D007086 ORTHO05D008927 7.1e-07 57.0 70 44.3
BcaB03g13189 Brassica carinata HOM05D007086 ORTHO05D008927 1.2e-06 56.2 70 40.0
Dinv00491 Davidia involucrata HOM05D007086 ORTHO05D008927 1.2e-06 56.2 64 45.3
CSS0011774 Camellia sinensis var. sinensis HOM05D007086 ORTHO05D008927 2.7e-06 55.1 69 42.0
CSS0048716 Camellia sinensis var. sinensis HOM05D007086 ORTHO05D008927 2.7e-06 55.1 69 42.0
FAN12G2970 Fragaria x ananassa HOM05D007086 ORTHO05D008927 2.7e-06 55.1 67 41.8
FAN12G3233 Fragaria x ananassa HOM05D007086 ORTHO05D008927 2.7e-06 55.1 67 41.8
CsaV3_3G003270 Cucumis sativus L. HOM05D007086 ORTHO05D008927 3.5e-06 54.7 70 41.4
Prupe.5G081100 Prunus persica HOM05D007086 ORTHO05D008927 3.5e-06 54.7 70 40.0
SEGI_31798 Sequoiadendron giganteum HOM05D007086 ORTHO05D008927 3.5e-06 54.7 70 35.7
Carub.0002s0211 Capsella rubella HOM05D007086 ORTHO05D008927 6.0e-06 53.9 68 41.2
FAN08G0246 Fragaria x ananassa HOM05D007086 ORTHO05D008927 6.0e-06 53.9 70 38.6
Hma1.2p1_0367F.1_g137100 Hydrangea macrophylla HOM05D007086 ORTHO05D008927 6.0e-06 53.9 70 40.0
Hma1.2p1_3825F.1_g337656 Hydrangea macrophylla HOM05D007086 ORTHO05D008927 6.0e-06 53.9 70 40.0
Sed0003691 Sechium edule HOM05D007086 ORTHO05D008927 6.0e-06 53.9 70 41.4
CANSAT21G1174 Cannabis sativa HOM05D007086 ORTHO05D008927 7.9e-06 53.5 69 39.1
Cpa.g.sc29.74 Carica papaya HOM05D007086 ORTHO05D008927 7.9e-06 53.5 70 40.0
Manes.02G032611 Manihot esculenta HOM05D007086 ORTHO05D008927 7.9e-06 53.5 69 42.0


User provided reference genes

Program Settings