Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21475 Brassica carinata HOM05D000497 ORTHO05D032945 1.8e-40 168.7 77 100.0
C09p31370 Brassica napus HOM05D000497 ORTHO05D032945 1.8e-40 168.7 77 100.0
BcaB02g07364 Brassica carinata HOM05D000497 ORTHO05D000020 4.3e-31 137.5 78 83.3
BcaC08g45144 Brassica carinata HOM05D000497 ORTHO05D000020 8.4e-27 123.2 79 74.7
C06p27630 Brassica napus HOM05D000497 ORTHO05D000020 8.4e-27 123.2 79 74.7
BolC6t37932H Brassica oleracea HOM05D000497 ORTHO05D000020 8.4e-27 123.2 79 74.7
A07p25640 Brassica napus HOM05D000497 ORTHO05D000020 2.7e-25 118.2 79 73.4
BraA07t30205Z Brassica rapa HOM05D000497 ORTHO05D000020 2.7e-25 118.2 79 72.2
Sp5g01780 Schrenkiella parvula HOM05D000497 ORTHO05D000020 7.9e-25 116.7 77 71.4
C08p36480 Brassica napus HOM05D000497 ORTHO05D000020 2.5e-23 111.7 80 70.0
BcaC07g40675 Brassica carinata HOM05D000497 ORTHO05D000020 1.6e-22 109.0 78 70.5
BolC8t51231H Brassica oleracea HOM05D000497 ORTHO05D000020 1.6e-22 109.0 78 70.5
Thhalv10006118m.g Eutrema salsugineum HOM05D000497 ORTHO05D000020 6.9e-21 103.6 77 63.6
BolC9t55995H Brassica oleracea HOM05D000497 ORTHO05D032945 5.9e-20 100.5 48 91.7
A09p53700 Brassica napus HOM05D000497 ORTHO05D000020 1.0e-19 99.8 80 67.5
BraA09t40792Z Brassica rapa HOM05D000497 ORTHO05D000020 1.1e-18 96.3 80 65.0
Carub.0005s2832 Capsella rubella HOM05D000497 ORTHO05D000020 4.2e-18 94.4 73 61.6
BcaB07g31899 Brassica carinata HOM05D000497 ORTHO05D000020 2.7e-17 91.7 72 63.9
Aa31LG10G15370 Aethionema arabicum HOM05D000497 ORTHO05D000020 1.6e-14 82.4 71 54.9
AL5G44020 Arabidopsis lyrata HOM05D000497 ORTHO05D000020 1.2e-12 76.3 76 51.3
AT3G61630 Arabidopsis thaliana HOM05D000497 ORTHO05D000020 2.0e-12 75.5 80 53.8
CARHR171960 Cardamine hirsuta HOM05D000497 ORTHO05D000020 2.9e-11 71.6 78 47.4
AL4G45610 Arabidopsis lyrata HOM05D000497 ORTHO05D000020 7.9e-09 63.5 72 47.2
Sp4g28350 Schrenkiella parvula HOM05D000497 ORTHO05D000020 1.5e-07 59.3 73 42.5
THA.LOC104827631 Tarenaya hassleriana HOM05D000497 ORTHO05D000020 9.7e-07 56.6 68 39.7
AT2G46310 Arabidopsis thaliana HOM05D000497 ORTHO05D000020 2.2e-06 55.5 74 41.9
BcaB01g03226 Brassica carinata HOM05D000497 ORTHO05D000020 2.8e-06 55.1 75 44.0
BcaC01g05078 Brassica carinata HOM05D000497 ORTHO05D000020 2.8e-06 55.1 75 44.0
Thhalv10001561m.g Eutrema salsugineum HOM05D000497 ORTHO05D000020 8.2e-06 53.5 72 40.3


User provided reference genes

Program Settings