Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p29560 Brassica napus HOM05D005573 ORTHO05D007161 1.1e-84 316.6 164 100.0
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 9.7e-81 303.5 157 100.0
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 9.7e-81 303.5 157 100.0
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 9.7e-81 303.5 157 100.0
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 9.7e-81 303.5 157 100.0
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 9.7e-81 303.5 157 100.0
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 9.7e-81 303.5 157 100.0
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 9.7e-81 303.5 157 100.0
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 9.7e-81 303.5 157 100.0
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 9.7e-81 303.5 157 100.0
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 4.8e-80 301.2 157 98.7
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 5.3e-79 297.7 157 98.1
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 2.0e-78 295.8 157 97.5
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 2.6e-78 295.4 157 97.5
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 4.2e-76 288.1 159 96.9
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 2.6e-73 278.9 155 91.6
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 5.7e-73 277.7 154 92.9
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 7.4e-73 277.3 157 91.1
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 7.4e-73 277.3 157 91.1
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 7.4e-73 277.3 157 91.1
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 7.4e-73 277.3 157 91.1
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 7.4e-73 277.3 157 91.1
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 7.4e-73 277.3 157 91.1
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 7.4e-73 277.3 157 91.1
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 2.2e-72 275.8 158 89.2
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 2.2e-72 275.8 158 89.2
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 6.3e-72 274.2 155 91.0
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 6.3e-72 274.2 155 91.6
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 1.1e-71 273.5 155 91.0
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 1.1e-71 273.5 158 90.5
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 3.1e-71 271.9 156 89.7
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 5.3e-71 271.2 158 88.0
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 7.0e-71 270.8 155 90.3
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 9.1e-71 270.4 155 91.0
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.0e-70 269.2 155 89.7
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.0e-70 269.2 155 89.7
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 2.6e-70 268.9 158 88.6
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 1.7e-69 266.2 155 89.0
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 1.7e-69 266.2 155 89.0
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 1.7e-69 266.2 155 89.0
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 4.2e-68 261.5 155 87.7
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 4.0e-66 255.0 155 85.8
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 1.2e-65 253.4 151 86.8
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 1.5e-65 253.1 155 86.5
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 2.0e-65 252.7 158 83.5
Lalb_Chr07g0191491 Lupinus albus HOM05D005573 ORTHO05D007161 5.7e-65 251.1 151 86.1
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 7.5e-65 250.8 155 85.8
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 7.5e-65 250.8 155 87.1
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 7.5e-65 250.8 155 87.1
Medtr0002s0590 Medicago truncatula HOM05D005573 ORTHO05D007161 1.8e-63 246.1 157 80.9
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 1.8e-63 246.1 157 80.9
Zm00001eb039100 Zea mays HOM05D005573 ORTHO05D007161 1.8e-63 246.1 157 80.9
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 1.8e-63 246.1 157 80.9
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 1.8e-63 246.1 157 80.9
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 1.8e-63 246.1 157 80.9
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 1.8e-63 246.1 157 80.9
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 1.8e-63 246.1 157 80.9
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 1.8e-63 246.1 157 80.9
Nitab4.5_0006596g0030 Nicotiana tabacum HOM05D005573 ORTHO05D007161 1.0e-61 240.4 148 85.8
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.2e-61 239.2 155 83.2
Gohir.A09G103300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.9e-61 238.8 161 80.7
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 4.2e-60 235.0 155 80.6
Zm00001eb231240 Zea mays HOM05D005573 ORTHO05D007161 1.6e-59 233.0 157 77.7
GSVIVG01021975001 Vitis vinifera HOM05D005573 ORTHO05D007161 6.3e-56 221.1 132 88.6
arahy.Tifrunner.gnm1.ann1.NT5R3P Arachis hypogaea HOM05D005573 ORTHO05D007161 7.0e-55 217.6 164 72.0
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 1.7e-53 213.0 157 76.4
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 3.3e-52 208.8 135 83.0
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 2.3e-50 202.6 150 70.0
Oeu062838.1 Olea europaea HOM05D005573 ORTHO05D007161 1.6e-46 189.9 129 80.6
ClCG00G003940 Citrullus lanatus HOM05D005573 ORTHO05D007161 1.0e-45 187.2 101 96.0
Phvul.011G056580 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 1.4e-39 166.8 101 85.1
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 3.5e-38 162.2 110 80.0
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 4.6e-38 161.8 90 88.9
Migut.D01353 Erythranthe guttata HOM05D005573 ORTHO05D007161 7.8e-38 161.0 156 60.3
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 2.3e-37 159.5 94 85.1
BolC9t56936H Brassica oleracea HOM05D005573 ORTHO05D007161 5.8e-33 144.8 77 96.1
BolSC29t60458H Brassica oleracea HOM05D005573 ORTHO05D007161 4.9e-32 141.7 70 100.0
BolSC47t61104H Brassica oleracea HOM05D005573 ORTHO05D007161 4.9e-32 141.7 70 100.0
Gohir.A09G045300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.3e-29 133.7 70 98.6
SEGI_40009 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 7.3e-28 127.9 111 64.0
SMO086G0035 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 1.6e-27 126.7 149 52.3
SMO086G0038 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 1.6e-27 126.7 149 52.3
BolSC47t61119H Brassica oleracea HOM05D005573 ORTHO05D007161 6.2e-27 124.8 64 100.0
HanXRQChr00c0345g0573881 Helianthus annuus HOM05D005573 ORTHO05D007161 8.1e-27 124.4 76 81.6
CiPaw.12G056900 Carya illinoinensis HOM05D005573 ORTHO05D007161 5.2e-26 121.7 75 77.3
Gohir.A09G045446 Gossypium hirsutum HOM05D005573 ORTHO05D007161 8.9e-26 120.9 76 78.9
BolC7t41664H Brassica oleracea HOM05D005573 ORTHO05D007161 1.2e-25 120.6 63 93.7
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 3.4e-25 119.0 58 100.0
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.7e-24 116.7 67 85.1
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.7e-24 116.7 67 85.1
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.7e-24 116.7 67 85.1
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.7e-24 115.5 67 83.6
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 6.4e-24 114.8 69 81.2
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 6.4e-24 114.8 69 81.2
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 6.4e-24 114.8 69 81.2
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 6.4e-24 114.8 69 81.2
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 6.4e-24 114.8 69 81.2
Sc09g0006540 Simmondsia chinensis HOM05D005573 ORTHO05D005696 1.1e-23 114.0 79 78.5
Zm00001eb434930 Zea mays HOM05D005573 ORTHO05D007161 1.4e-23 113.6 69 81.2
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 1.4e-23 113.6 69 81.2
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 9.2e-23 110.9 67 77.6
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 4.6e-22 108.6 67 79.1
Solyc11g022610.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 6.0e-22 108.2 87 73.6
Nn071s42388 Nelumbo nucifera HOM05D005573 ORTHO05D007161 3.0e-21 105.9 77 80.5
TAR625G0941 Trochodendron aralioides HOM05D005573 ORTHO05D007161 6.2e-19 98.2 60 76.7
Mapoly0090s0058 Marchantia polymorpha HOM05D005573 ORTHO05D007161 1.8e-18 96.7 66 71.2
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 3.1e-18 95.9 55 81.8
MELO3C027485.2 Cucumis melo HOM05D005573 ORTHO05D007161 1.3e-16 90.5 50 86.0
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 1.3e-16 90.5 60 73.3
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 1.7e-16 90.1 56 78.6
TAR375G0006 Trochodendron aralioides HOM05D005573 ORTHO05D007161 2.9e-16 89.4 56 76.8
BraSC25t45840Z Brassica rapa HOM05D005573 ORTHO05D007161 3.8e-16 89.0 52 90.4
MELO3C022836.2 Cucumis melo HOM05D005573 ORTHO05D007161 3.8e-16 89.0 49 85.7
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 2.4e-15 86.3 56 75.0
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 4.2e-15 85.5 56 75.0
Oeu056456.1 Olea europaea HOM05D005573 ORTHO05D007161 7.1e-15 84.7 47 85.1
Nn055s41940 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.6e-14 83.6 48 83.3
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 4.6e-14 82.0 51 74.5
CAN.G63.13 Capsicum annuum HOM05D005573 ORTHO05D007161 1.0e-13 80.9 56 69.6
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 1.7e-13 80.1 56 69.6
Nn021s41552 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.5e-12 77.0 41 92.7
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.5e-12 77.0 43 81.4
BolC9t55817H Brassica oleracea HOM05D005573 ORTHO05D007161 4.7e-11 72.0 48 79.2
BolSC29t60581H Brassica oleracea HOM05D005573 ORTHO05D007161 8.1e-11 71.2 36 100.0
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 1.4e-10 70.5 67 58.2
ClCG11G007200 Citrullus lanatus HOM05D005573 ORTHO05D007161 2.4e-10 69.7 46 71.7
Glyma.18G203700 Glycine max HOM05D005573 ORTHO05D007161 7.6e-09 64.7 40 82.5
Oeu052069.1 Olea europaea HOM05D005573 ORTHO05D007161 4.6e-06 55.5 37 81.1


User provided reference genes

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