Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p28950 Brassica napus HOM05D009142 ORTHO05D097323 8.1e-157 557.0 273 100.0
BolC2t08459H Brassica oleracea HOM05D009142 ORTHO05D106632 2.9e-74 282.7 246 65.4
BolC3t19224H Brassica oleracea HOM05D009142 ORTHO05D017515 9.5e-73 277.7 229 65.5
BolC1t02765H Brassica oleracea HOM05D009142 ORTHO05D040187 7.5e-70 268.1 303 56.8
C03p69660 Brassica napus HOM05D009142 ORTHO05D017515 1.3e-61 240.7 178 70.8
C02p23170 Brassica napus HOM05D009142 ORTHO05D017515 4.9e-61 238.8 178 70.8
C01p32780 Brassica napus HOM05D009142 ORTHO05D017515 9.2e-60 234.6 178 70.2
BolC9t55760H Brassica oleracea HOM05D009142 ORTHO05D017515 3.4e-54 216.1 126 88.1
BcaC01g02001 Brassica carinata HOM05D009142 ORTHO05D017515 1.3e-53 214.2 121 88.4
BcaC01g01996 Brassica carinata HOM05D009142 ORTHO05D017515 1.7e-53 213.8 121 88.4
C03p69730 Brassica napus HOM05D009142 ORTHO05D017515 4.9e-53 212.2 121 87.6
BcaC04g21679 Brassica carinata HOM05D009142 ORTHO05D090460 8.3e-53 211.5 126 86.5
BolC3t19232H Brassica oleracea HOM05D009142 ORTHO05D106603 1.2e-51 207.6 126 84.9
C01p28360 Brassica napus HOM05D009142 ORTHO05D040187 3.5e-51 206.1 223 59.2
C08p06560 Brassica napus HOM05D009142 ORTHO05D017515 4.6e-51 205.7 163 68.1
BolC1t01877H Brassica oleracea HOM05D009142 ORTHO05D105623 1.8e-47 193.7 213 52.1
BcaC07g37235 Brassica carinata HOM05D009142 ORTHO05D090351 2.7e-43 179.9 106 85.8
BcaC09g49802 Brassica carinata HOM05D009142 ORTHO05D091049 1.9e-41 173.7 118 76.3
C03p63120 Brassica napus HOM05D009142 ORTHO05D041944 2.1e-40 170.2 124 74.2
C04p24200 Brassica napus HOM05D009142 ORTHO05D097994 1.4e-36 157.5 91 87.9
BolC8t47502H Brassica oleracea HOM05D009142 ORTHO05D041800 1.9e-36 157.1 132 65.2
BolC1t03216H Brassica oleracea HOM05D009142 ORTHO05D106828 3.8e-21 106.3 62 82.3
BcaC09g50894 Brassica carinata HOM05D009142 ORTHO05D095404 9.3e-20 101.7 91 65.9
C01p19480 Brassica napus HOM05D009142 ORTHO05D041800 1.2e-19 101.3 95 65.3
BcaC06g33515 Brassica carinata HOM05D009142 ORTHO05D027516 1.3e-18 97.8 128 50.8
C07p48260 Brassica napus HOM05D009142 ORTHO05D027516 1.3e-18 97.8 128 50.8
BolC3t18566H Brassica oleracea HOM05D009142 ORTHO05D041944 2.5e-17 93.6 101 60.4
C03p63110 Brassica napus HOM05D009142 ORTHO05D101793 6.5e-13 79.0 79 63.3
BcaC06g33437 Brassica carinata HOM05D003261 ORTHO05D004230 2.3e-10 70.5 48 75.0
C07p47500 Brassica napus HOM05D003261 ORTHO05D004230 2.3e-10 70.5 48 75.0
BolC7t45277H Brassica oleracea HOM05D003261 ORTHO05D004230 2.3e-10 70.5 48 75.0
BcaC06g32973 Brassica carinata HOM05D003261 ORTHO05D004230 6.7e-10 68.9 48 72.9
BraA03t14046Z Brassica rapa HOM05D003261 ORTHO05D004230 8.7e-10 68.6 48 72.9
A03p49450 Brassica napus HOM05D003261 ORTHO05D004230 1.9e-09 67.4 48 72.9
Carub.0007s2576 Capsella rubella HOM05D003261 ORTHO05D004230 1.9e-09 67.4 70 54.3
SpUn1161_0010 Schrenkiella parvula HOM05D003261 ORTHO05D027516 5.7e-09 65.9 81 46.9
C01p19490 Brassica napus HOM05D009142 ORTHO05D041610 7.4e-09 65.5 34 88.2
Thhalv10025068m.g Eutrema salsugineum HOM05D003261 ORTHO05D004230 7.4e-09 65.5 48 68.8
Sp7g14310 Schrenkiella parvula HOM05D002510 ORTHO05D007210 1.3e-08 64.7 48 70.8
AL7G39370 Arabidopsis lyrata HOM05D003261 ORTHO05D004230 2.8e-08 63.5 48 68.8
CARHR290440 Cardamine hirsuta HOM05D003261 ORTHO05D004230 3.7e-08 63.2 48 68.8
AT4G15900 Arabidopsis thaliana HOM05D003261 ORTHO05D004230 6.9e-07 58.9 49 65.3
BcaC01g02590 Brassica carinata HOM05D012155 ORTHO05D021780 6.9e-07 58.9 41 78.0
Aa31LG10G6240 Aethionema arabicum HOM05D003261 ORTHO05D004230 3.4e-06 56.6 48 62.5
BcaNung00239 Brassica carinata HOM05D003261 ORTHO05D004230 4.5e-06 56.2 48 64.6


User provided reference genes

Program Settings