Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p26140 Brassica napus HOM05D001038 ORTHO05D010763 2.0e-26 121.7 64 100.0
BolC7t41684H Brassica oleracea HOM05D001038 ORTHO05D010763 1.5e-24 115.5 64 93.8
C07p12170 Brassica napus HOM05D001038 ORTHO05D010763 3.3e-24 114.4 64 92.2
BolC6t38916H Brassica oleracea HOM05D001038 ORTHO05D010763 4.3e-24 114.0 64 92.2
C08p05930 Brassica napus HOM05D001038 ORTHO05D010763 5.6e-24 113.6 64 95.3
C07p12200 Brassica napus HOM05D001038 ORTHO05D010763 7.3e-24 113.2 64 92.2
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 1.0e-22 109.4 65 90.8
C07p18290 Brassica napus HOM05D001038 ORTHO05D010763 1.4e-22 109.0 64 92.2
BolC7t41410H Brassica oleracea HOM05D001038 ORTHO05D010763 8.9e-22 106.3 60 91.7
BolC2t11143H Brassica oleracea HOM05D001038 ORTHO05D024385 2.6e-21 104.8 64 84.4
C07p09720 Brassica napus HOM05D001038 ORTHO05D010763 5.7e-21 103.6 60 91.7
BolC9t55517H Brassica oleracea HOM05D001038 ORTHO05D024385 7.5e-13 76.6 37 100.0
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 6.4e-12 73.6 64 57.8
C03p52030 Brassica napus HOM05D001038 ORTHO05D000395 6.4e-12 73.6 60 60.0
BolC3t17485H Brassica oleracea HOM05D001038 ORTHO05D000395 6.4e-12 73.6 60 60.0
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-11 72.4 64 53.1
A03p68390 Brassica napus HOM05D016987 ORTHO05D010763 1.4e-11 72.4 63 58.7
BraSC36t46107Z Brassica rapa HOM05D016987 ORTHO05D010763 1.4e-11 72.4 63 58.7
BcaB06g26982 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-11 72.0 64 56.2
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 4.1e-11 70.9 60 51.7
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 5.4e-11 70.5 64 56.2
BcaB08g35416 Brassica carinata HOM05D001038 ORTHO05D017560 7.0e-11 70.1 61 55.7
C05p37200 Brassica napus HOM05D001038 ORTHO05D017560 9.2e-11 69.7 61 54.1
BraA06t25412Z Brassica rapa HOM05D001038 ORTHO05D017560 2.0e-10 68.6 63 55.6
BNapus_Darmor_BZH_scaffold_103p00090 Brassica napus HOM05D016987 ORTHO05D010763 3.5e-10 67.8 63 58.7
BNapus_Darmor_BZH_scaffold_104p00100 Brassica napus HOM05D016987 ORTHO05D010763 3.5e-10 67.8 63 58.7
BraA01t02618Z Brassica rapa HOM05D016987 ORTHO05D010763 4.6e-10 67.4 63 55.6
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-09 66.2 57 56.1
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-09 65.9 64 53.1
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-09 65.9 64 53.1
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-09 65.9 64 50.0
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-09 65.5 64 51.6
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.7e-09 65.5 61 49.2
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 1.1e-08 62.8 56 44.6
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 1.1e-08 62.8 56 44.6
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 3.3e-08 61.2 58 41.4
C02p45450 Brassica napus HOM05D001038 ORTHO05D017560 5.6e-08 60.5 60 50.0
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 5.6e-08 60.5 58 43.1
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 7.3e-08 60.1 56 42.9
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 9.5e-08 59.7 61 47.5
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 9.5e-08 59.7 58 44.8
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 9.5e-08 59.7 56 42.9
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 1.2e-07 59.3 56 42.9
Thhalv10003408m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.2e-07 59.3 56 48.2
Thhalv10023964m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.2e-07 59.3 56 48.2
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 2.1e-07 58.5 64 46.9
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 2.1e-07 58.5 64 46.9
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 2.1e-07 58.5 58 46.6
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 2.1e-07 58.5 63 44.4
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 2.1e-07 58.5 56 46.4
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-07 58.2 64 46.9
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 2.8e-07 58.2 58 43.1
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 3.6e-07 57.8 56 41.1
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 3.6e-07 57.8 58 41.4
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 3.6e-07 57.8 56 46.4
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 4.7e-07 57.4 63 38.1
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 6.2e-07 57.0 58 46.6
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 8.1e-07 56.6 62 45.2
C04p58380 Brassica napus HOM05D001038 ORTHO05D010763 1.1e-06 56.2 58 44.8
BcaB04g19444 Brassica carinata HOM05D001038 ORTHO05D010763 1.4e-06 55.8 56 39.3
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 4.0e-06 54.3 58 37.9
BcaB06g26737 Brassica carinata HOM05D001038 ORTHO05D010763 4.0e-06 54.3 58 39.7
BcaB02g10757 Brassica carinata HOM05D007462 ORTHO05D002086 5.2e-06 53.9 58 39.7
BcaC08g44171 Brassica carinata HOM05D007462 ORTHO05D002086 6.8e-06 53.5 58 43.1
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 8.9e-06 53.1 58 37.9
BcaB06g27083 Brassica carinata HOM05D001038 ORTHO05D010763 8.9e-06 53.1 61 36.1
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 8.9e-06 53.1 58 39.7


User provided reference genes

Program Settings