Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001038', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '10' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p01820' => 'bna', 'A01p23200' => 'bna', 'A01p24490' => 'bna', 'A01p25970' => 'bna', 'A01p38280' => 'bna', 'A02p12560' => 'bna', 'A02p12570' => 'bna', 'A02p22710' => 'bna', 'A02p26950' => 'bna', 'A02p27290' => 'bna', 'A02p37020' => 'bna', 'A03p30780' => 'bna', 'A03p31860' => 'bna', 'A03p51100' => 'bna', 'A03p68060' => 'bna', 'A04p08060' => 'bna', 'A04p08070' => 'bna', 'A04p08290' => 'bna', 'A04p08430' => 'bna', 'A04p11350' => 'bna', 'A04p11380' => 'bna', 'A04p16280' => 'bna', 'A04p22180' => 'bna', 'A05p13620' => 'bna', 'A05p15580' => 'bna', 'A05p21480' => 'bna', 'A05p23600' => 'bna', 'A05p25760' => 'bna', 'A05p28250' => 'bna', 'A06p10190' => 'bna', 'A06p16020' => 'bna', 'A06p18460' => 'bna', 'A06p22310' => 'bna', 'A06p23100' => 'bna', 'A06p26760' => 'bna', 'A06p26770' => 'bna', 'A06p28660' => 'bna', 'A06p36110' => 'bna', 'A07p05940' => 'bna', 'A07p07690' => 'bna', 'A07p07700' => 'bna', 'A07p11770' => 'bna', 'A07p30050' => 'bna', 'A07p31540' => 'bna', 'A09p28390' => 'bna', 'A09p34780' => 'bna', 'A09p36510' => 'bna', 'A09p58370' => 'bna', 'A09p58380' => 'bna', 'A09p58390' => 'bna', 'A10p07420' => 'bna', 'A10p07430' => 'bna', 'A10p08770' => 'bna', 'A10p12160' => 'bna', 'A10p12170' => 'bna', 'A10p17410' => 'bna', 'AL3G41000' => 'aly', 'AL3G41200' => 'aly', 'AL5G24460' => 'aly', 'AL6G43780' => 'aly', 'AL6G49460' => 'aly', 'AL8G20830' => 'aly', 'AT2G07240' => 'ath', 'BcaB01g00119' => 'bca', 'BcaB01g00832' => 'bca', 'BcaB01g01124' => 'bca', 'BcaB01g01205' => 'bca', 'BcaB01g01303' => 'bca', 'BcaB01g01349' => 'bca', 'BcaB01g01350' => 'bca', 'BcaB01g01530' => 'bca', 'BcaB01g01601' => 'bca', 'BcaB01g01614' => 'bca', 'BcaB01g01698' => 'bca', 'BcaB01g01699' => 'bca', 'BcaB01g01825' => 'bca', 'BcaB01g01915' => 'bca', 'BcaB01g02361' => 'bca', 'BcaB01g02362' => 'bca', 'BcaB01g02419' => 'bca', 'BcaB01g03119' => 'bca', 'BcaB01g04196' => 'bca', 'BcaB02g06555' => 'bca', 'BcaB02g07256' => 'bca', 'BcaB02g10677' => 'bca', 'BcaB02g10814' => 'bca', 'BcaB02g10826' => 'bca', 'BcaB02g10843' => 'bca', 'BcaB02g10939' => 'bca', 'BcaB02g11035' => 'bca', 'BcaB02g11159' => 'bca', 'BcaB03g12379' => 'bca', 'BcaB03g13655' => 'bca', 'BcaB03g14886' => 'bca', 'BcaB03g15871' => 'bca', 'BcaB03g16061' => 'bca', 'BcaB03g16260' => 'bca', 'BcaB03g16464' => 'bca', 'BcaB03g16578' => 'bca', 'BcaB03g16620' => 'bca', 'BcaB04g17277' => 'bca', 'BcaB04g17339' => 'bca', 'BcaB04g17690' => 'bca', 'BcaB04g17766' => 'bca', 'BcaB04g17932' => 'bca', 'BcaB04g18537' => 'bca', 'BcaB04g19295' => 'bca', 'BcaB04g19444' => 'bca', 'BcaB04g19629' => 'bca', 'BcaB05g21586' => 'bca', 'BcaB05g22095' => 'bca', 'BcaB05g22891' => 'bca', 'BcaB05g23462' => 'bca', 'BcaB05g23512' => 'bca', 'BcaB05g23513' => 'bca', 'BcaB05g23592' => 'bca', 'BcaB05g23859' => 'bca', 'BcaB05g24425' => 'bca', 'BcaB05g25087' => 'bca', 'BcaB06g25472' => 'bca', 'BcaB06g26021' => 'bca', 'BcaB06g26608' => 'bca', 'BcaB06g26720' => 'bca', 'BcaB06g26737' => 'bca', 'BcaB06g26967' => 'bca', 'BcaB06g26982' => 'bca', 'BcaB06g27083' => 'bca', 'BcaB06g27191' => 'bca', 'BcaB06g27482' => 'bca', 'BcaB06g27710' => 'bca', 'BcaB06g27965' => 'bca', 'BcaB06g28131' => 'bca', 'BcaB06g28161' => 'bca', 'BcaB06g28199' => 'bca', 'BcaB06g28541' => 'bca', 'BcaB06g28542' => 'bca', 'BcaB06g28671' => 'bca', 'BcaB07g30174' => 'bca', 'BcaB07g31162' => 'bca', 'BcaB07g31487' => 'bca', 'BcaB07g31666' => 'bca', 'BcaB07g31818' => 'bca', 'BcaB07g32041' => 'bca', 'BcaB07g32042' => 'bca', 'BcaB07g32226' => 'bca', 'BcaB07g32567' => 'bca', 'BcaB07g32736' => 'bca', 'BcaB07g32737' => 'bca', 'BcaB07g32821' => 'bca', 'BcaB07g33328' => 'bca', 'BcaB07g33632' => 'bca', 'BcaB08g34364' => 'bca', 'BcaB08g34565' => 'bca', 'BcaB08g34623' => 'bca', 'BcaB08g34624' => 'bca', 'BcaB08g34710' => 'bca', 'BcaB08g34782' => 'bca', 'BcaB08g34797' => 'bca', 'BcaB08g34843' => 'bca', 'BcaB08g35144' => 'bca', 'BcaB08g35415' => 'bca', 'BcaB08g35416' => 'bca', 'BcaB08g35558' => 'bca', 'BcaB08g36368' => 'bca', 'BcaB08g36369' => 'bca', 'BcaB08g36731' => 'bca', 'BcaB08g36820' => 'bca', 'BcaB08g36899' => 'bca', 'BcaC01g02304' => 'bca', 'BcaC01g03478' => 'bca', 'BcaC01g03622' => 'bca', 'BcaC01g03710' => 'bca', 'BcaC01g03929' => 'bca', 'BcaC01g04978' => 'bca', 'BcaC01g04979' => 'bca', 'BcaC01g04980' => 'bca', 'BcaC02g07854' => 'bca', 'BcaC02g08100' => 'bca', 'BcaC03g14544' => 'bca', 'BcaC03g15415' => 'bca', 'BcaC03g15830' => 'bca', 'BcaC03g16183' => 'bca', 'BcaC03g17929' => 'bca', 'BcaC04g19622' => 'bca', 'BcaC04g19884' => 'bca', 'BcaC04g20293' => 'bca', 'BcaC04g20563' => 'bca', 'BcaC04g20742' => 'bca', 'BcaC04g21093' => 'bca', 'BcaC04g21460' => 'bca', 'BcaC04g21625' => 'bca', 'BcaC04g22192' => 'bca', 'BcaC04g23074' => 'bca', 'BcaC05g24335' => 'bca', 'BcaC05g24336' => 'bca', 'BcaC05g25183' => 'bca', 'BcaC05g25823' => 'bca', 'BcaC05g26744' => 'bca', 'BcaC05g27501' => 'bca', 'BcaC05g27690' => 'bca', 'BcaC05g27733' => 'bca', 'BcaC05g27866' => 'bca', 'BcaC05g28246' => 'bca', 'BcaC05g28787' => 'bca', 'BcaC06g32026' => 'bca', 'BcaC06g32416' => 'bca', 'BcaC06g33611' => 'bca', 'BcaC06g33888' => 'bca', 'BcaC06g34271' => 'bca', 'BcaC06g34914' => 'bca', 'BcaC06g35484' => 'bca', 'BcaC06g35567' => 'bca', 'BcaC06g35568' => 'bca', 'BcaC06g35698' => 'bca', 'BcaC06g35713' => 'bca', 'BcaC06g35714' => 'bca', 'BcaC06g36746' => 'bca', 'BcaC07g36920' => 'bca', 'BcaC07g37457' => 'bca', 'BcaC07g37762' => 'bca', 'BcaC07g38184' => 'bca', 'BcaC07g39263' => 'bca', 'BcaC08g43120' => 'bca', 'BcaC08g43867' => 'bca', 'BcaC08g44142' => 'bca', 'BcaC08g44172' => 'bca', 'BcaC08g44444' => 'bca', 'BcaC08g45228' => 'bca', 'BcaC08g46850' => 'bca', 'BcaC08g46978' => 'bca', 'BcaC08g46980' => 'bca', 'BcaC08g47005' => 'bca', 'BcaC09g48751' => 'bca', 'BcaC09g49024' => 'bca', 'BcaC09g49287' => 'bca', 'BcaC09g50083' => 'bca', 'BcaC09g51573' => 'bca', 'BcaC09g51594' => 'bca', 'BcaNung00229' => 'bca', 'BcaNung00284' => 'bca', 'BcaNung00468' => 'bca', 'BcaNung01360' => 'bca', 'BcaNung02282' => 'bca', 'BcaNung02449' => 'bca', 'BcaNung04782' => 'bca', 'BNapus_Darmor_BZH_scaffold_103p00080' => 'bna', 'BNapus_Darmor_BZH_scaffold_104p00080' => 'bna', 'BNapus_Darmor_BZH_scaffold_104p00090' => 'bna', 'BNapus_Darmor_BZH_scaffold_38p00010' => 'bna', 'BNapus_Darmor_BZH_scaffold_38p02600' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00150' => 'bna', 'BolC1t01121H' => 'bol', 'BolC1t01131H' => 'bol', 'BolC1t01148H' => 'bol', 'BolC1t01149H' => 'bol', 'BolC1t01902H' => 'bol', 'BolC1t02113H' => 'bol', 'BolC1t03990H' => 'bol', 'BolC1t04285H' => 'bol', 'BolC1t04589H' => 'bol', 'BolC1t05514H' => 'bol', 'BolC2t07185H' => 'bol', 'BolC2t07874H' => 'bol', 'BolC2t08169H' => 'bol', 'BolC2t09973H' => 'bol', 'BolC2t11143H' => 'bol', 'BolC2t11144H' => 'bol', 'BolC2t11145H' => 'bol', 'BolC2t11293H' => 'bol', 'BolC2t11347H' => 'bol', 'BolC3t14874H' => 'bol', 'BolC3t15494H' => 'bol', 'BolC3t15766H' => 'bol', 'BolC3t16968H' => 'bol', 'BolC3t16999H' => 'bol', 'BolC3t17485H' => 'bol', 'BolC3t18949H' => 'bol', 'BolC3t18950H' => 'bol', 'BolC3t19681H' => 'bol', 'BolC3t20321H' => 'bol', 'BolC3t20322H' => 'bol', 'BolC4t23574H' => 'bol', 'BolC4t23575H' => 'bol', 'BolC4t24024H' => 'bol', 'BolC4t25611H' => 'bol', 'BolC4t25613H' => 'bol', 'BolC4t26208H' => 'bol', 'BolC4t26248H' => 'bol', 'BolC4t27362H' => 'bol', 'BolC4t27749H' => 'bol', 'BolC5t30492H' => 'bol', 'BolC5t31711H' => 'bol', 'BolC5t31712H' => 'bol', 'BolC5t32344H' => 'bol', 'BolC5t32403H' => 'bol', 'BolC5t32608H' => 'bol', 'BolC5t33003H' => 'bol', 'BolC5t33633H' => 'bol', 'BolC5t33734H' => 'bol', 'BolC5t34489H' => 'bol', 'BolC6t36138H' => 'bol', 'BolC6t36405H' => 'bol', 'BolC6t36761H' => 'bol', 'BolC6t36762H' => 'bol', 'BolC6t37095H' => 'bol', 'BolC6t37789H' => 'bol', 'BolC6t37790H' => 'bol', 'BolC6t38914H' => 'bol', 'BolC6t38915H' => 'bol', 'BolC6t38916H' => 'bol', 'BolC7t40492H' => 'bol', 'BolC7t41164H' => 'bol', 'BolC7t41409H' => 'bol', 'BolC7t41410H' => 'bol', 'BolC7t41626H' => 'bol', 'BolC7t41648H' => 'bol', 'BolC7t41662H' => 'bol', 'BolC7t41684H' => 'bol', 'BolC7t41688H' => 'bol', 'BolC7t41839H' => 'bol', 'BolC7t41881H' => 'bol', 'BolC7t42043H' => 'bol', 'BolC7t42338H' => 'bol', 'BolC7t42339H' => 'bol', 'BolC7t42469H' => 'bol', 'BolC7t42716H' => 'bol', 'BolC7t43509H' => 'bol', 'BolC7t43636H' => 'bol', 'BolC7t44008H' => 'bol', 'BolC7t44009H' => 'bol', 'BolC7t44103H' => 'bol', 'BolC7t44104H' => 'bol', 'BolC7t44786H' => 'bol', 'BolC8t47295H' => 'bol', 'BolC8t47413H' => 'bol', 'BolC8t47777H' => 'bol', 'BolC8t48147H' => 'bol', 'BolC8t49550H' => 'bol', 'BolC9t54134H' => 'bol', 'BolC9t55139H' => 'bol', 'BolC9t55140H' => 'bol', 'BolC9t55517H' => 'bol', 'BolC9t55518H' => 'bol', 'BolC9t55839H' => 'bol', 'BolC9t56412H' => 'bol', 'BolC9t56621H' => 'bol', 'BolC9t56849H' => 'bol', 'BolC9t57089H' => 'bol', 'BolC9t57409H' => 'bol', 'BolC9t58082H' => 'bol', 'BolC9t58942H' => 'bol', 'BolC9t59718H' => 'bol', 'BolC9t59719H' => 'bol', 'BolC9t59720H' => 'bol', 'BraA01t02127Z' => 'bra', 'BraA01t02128Z' => 'bra', 'BraA01t02230Z' => 'bra', 'BraA01t02417Z' => 'bra', 'BraA01t02516Z' => 'bra', 'BraA01t02885Z' => 'bra', 'BraA02t06493Z' => 'bra', 'BraA02t06821Z' => 'bra', 'BraA02t07755Z' => 'bra', 'BraA02t08028Z' => 'bra', 'BraA02t08689Z' => 'bra', 'BraA02t08904Z' => 'bra', 'BraA02t08905Z' => 'bra', 'BraA02t08907Z' => 'bra', 'BraA03t11730Z' => 'bra', 'BraA03t12256Z' => 'bra', 'BraA03t13820Z' => 'bra', 'BraA03t13821Z' => 'bra', 'BraA04t16494Z' => 'bra', 'BraA04t16531Z' => 'bra', 'BraA04t16532Z' => 'bra', 'BraA04t16611Z' => 'bra', 'BraA04t16612Z' => 'bra', 'BraA04t16796Z' => 'bra', 'BraA04t16797Z' => 'bra', 'BraA04t16800Z' => 'bra', 'BraA04t17267Z' => 'bra', 'BraA04t17286Z' => 'bra', 'BraA04t18197Z' => 'bra', 'BraA04t18267Z' => 'bra', 'BraA05t19810Z' => 'bra', 'BraA05t20013Z' => 'bra', 'BraA05t20300Z' => 'bra', 'BraA05t20301Z' => 'bra', 'BraA05t20474Z' => 'bra', 'BraA05t21066Z' => 'bra', 'BraA05t21067Z' => 'bra', 'BraA05t21228Z' => 'bra', 'BraA05t21246Z' => 'bra', 'BraA05t21309Z' => 'bra', 'BraA05t21461Z' => 'bra', 'BraA05t21706Z' => 'bra', 'BraA05t22113Z' => 'bra', 'BraA06t24004Z' => 'bra', 'BraA06t24005Z' => 'bra', 'BraA06t24545Z' => 'bra', 'BraA06t24710Z' => 'bra', 'BraA06t25315Z' => 'bra', 'BraA06t25316Z' => 'bra', 'BraA06t25335Z' => 'bra', 'BraA06t25336Z' => 'bra', 'BraA06t25408Z' => 'bra', 'BraA06t25409Z' => 'bra', 'BraA06t25412Z' => 'bra', 'BraA06t25413Z' => 'bra', 'BraA06t25652Z' => 'bra', 'BraA06t25806Z' => 'bra', 'BraA07t28076Z' => 'bra', 'BraA07t28383Z' => 'bra', 'BraA07t28562Z' => 'bra', 'BraA07t28563Z' => 'bra', 'BraA07t28779Z' => 'bra', 'BraA07t28816Z' => 'bra', 'BraA07t28962Z' => 'bra', 'BraA07t29115Z' => 'bra', 'BraA08t32580Z' => 'bra', 'BraA08t32783Z' => 'bra', 'BraA08t32953Z' => 'bra', 'BraA08t34217Z' => 'bra', 'BraA08t34502Z' => 'bra', 'BraA09t36747Z' => 'bra', 'BraA09t41072Z' => 'bra', 'BraA10t43039Z' => 'bra', 'BraA10t43313Z' => 'bra', 'BraA10t43452Z' => 'bra', 'BraSC36t46061Z' => 'bra', 'BraSC36t46105Z' => 'bra', 'BraSC36t46106Z' => 'bra', 'BraSC37t46126Z' => 'bra', 'C01p11550' => 'bna', 'C01p11670' => 'bna', 'C01p21260' => 'bna', 'C01p21870' => 'bna', 'C01p40340' => 'bna', 'C01p42190' => 'bna', 'C01p43230' => 'bna', 'C01p43390' => 'bna', 'C01p46270' => 'bna', 'C02p24050' => 'bna', 'C02p30270' => 'bna', 'C02p30280' => 'bna', 'C02p31720' => 'bna', 'C02p39590' => 'bna', 'C02p45440' => 'bna', 'C02p45450' => 'bna', 'C02p52080' => 'bna', 'C03p31460' => 'bna', 'C03p31470' => 'bna', 'C03p34550' => 'bna', 'C03p47220' => 'bna', 'C03p52030' => 'bna', 'C03p52320' => 'bna', 'C03p66800' => 'bna', 'C03p66810' => 'bna', 'C03p66820' => 'bna', 'C03p74230' => 'bna', 'C03p74910' => 'bna', 'C04p20490' => 'bna', 'C04p20500' => 'bna', 'C04p40310' => 'bna', 'C04p40350' => 'bna', 'C04p42380' => 'bna', 'C04p46240' => 'bna', 'C04p57150' => 'bna', 'C04p58370' => 'bna', 'C04p58380' => 'bna', 'C05p12340' => 'bna', 'C05p34660' => 'bna', 'C05p34670' => 'bna', 'C05p36210' => 'bna', 'C05p36690' => 'bna', 'C05p37200' => 'bna', 'C05p37210' => 'bna', 'C05p38680' => 'bna', 'C05p40160' => 'bna', 'C05p42760' => 'bna', 'C05p48920' => 'bna', 'C05p48930' => 'bna', 'C06p00840' => 'bna', 'C06p00850' => 'bna', 'C06p00860' => 'bna', 'C06p03930' => 'bna', 'C06p06920' => 'bna', 'C06p10570' => 'bna', 'C06p12520' => 'bna', 'C06p18900' => 'bna', 'C06p26270' => 'bna', 'C06p26280' => 'bna', 'C06p38180' => 'bna', 'C07p07480' => 'bna', 'C07p09720' => 'bna', 'C07p11750' => 'bna', 'C07p11760' => 'bna', 'C07p11920' => 'bna', 'C07p12170' => 'bna', 'C07p12200' => 'bna', 'C07p12210' => 'bna', 'C07p13440' => 'bna', 'C07p15560' => 'bna', 'C07p18280' => 'bna', 'C07p18290' => 'bna', 'C07p19510' => 'bna', 'C07p21840' => 'bna', 'C07p21850' => 'bna', 'C07p30940' => 'bna', 'C07p34820' => 'bna', 'C07p35880' => 'bna', 'C07p42580' => 'bna', 'C07p60310' => 'bna', 'C08p05930' => 'bna', 'C08p05940' => 'bna', 'C08p05950' => 'bna', 'C08p09290' => 'bna', 'C08p17260' => 'bna', 'C08p22120' => 'bna', 'C08p22730' => 'bna', 'C08p27920' => 'bna', 'C09p12400' => 'bna', 'C09p12410' => 'bna', 'C09p20540' => 'bna', 'C09p22250' => 'bna', 'C09p26140' => 'bna', 'C09p26150' => 'bna', 'C09p35780' => 'bna', 'C09p36260' => 'bna', 'C09p37880' => 'bna', 'C09p39680' => 'bna', 'C09p39690' => 'bna', 'C09p42070' => 'bna', 'C09p45390' => 'bna', 'C09p50150' => 'bna', 'C09p52160' => 'bna', 'C09p60390' => 'bna', 'C09p68940' => 'bna', 'C09p68950' => 'bna', 'C09p69750' => 'bna', 'CARHR034500' => 'chi', 'CARHR034790' => 'chi', 'CARHR104490' => 'chi', 'CARHR120350' => 'chi', 'CARHR153260' => 'chi', 'CARHR182390' => 'chi', 'CARHR216710' => 'chi', 'Carub.0004s1123' => 'cru', 'Carub.0007s2445' => 'cru', 'Carub.0013s0014' => 'cru', 'Sp1g37020' => 'spa', 'Sp3g26840' => 'spa', 'Sp4g09680' => 'spa', 'Sp4g09840' => 'spa', 'Sp5g17750' => 'spa', 'Sp5g23310' => 'spa', 'Sp6g06510' => 'spa', 'Sp6g11090' => 'spa', 'SpUn0001_0050' => 'spa', 'Thhalv10000713m.g' => 'esa', 'Thhalv10001261m.g' => 'esa', 'Thhalv10002173m.g' => 'esa', 'Thhalv10002299m.g' => 'esa', 'Thhalv10002771m.g' => 'esa', 'Thhalv10002975m.g' => 'esa', 'Thhalv10003015m.g' => 'esa', 'Thhalv10003093m.g' => 'esa', 'Thhalv10003372m.g' => 'esa', 'Thhalv10003408m.g' => 'esa', 'Thhalv10009967m.g' => 'esa', 'Thhalv10010036m.g' => 'esa', 'Thhalv10011074m.g' => 'esa', 'Thhalv10012295m.g' => 'esa', 'Thhalv10015415m.g' => 'esa', 'Thhalv10015447m.g' => 'esa', 'Thhalv10015533m.g' => 'esa', 'Thhalv10015691m.g' => 'esa', 'Thhalv10022419m.g' => 'esa', 'Thhalv10023140m.g' => 'esa', 'Thhalv10023958m.g' => 'esa', 'Thhalv10023964m.g' => 'esa', 'Thhalv10023977m.g' => 'esa', 'Thhalv10029129m.g' => 'esa', 'Thhalv10029131m.g' => 'esa', 'Thhalv10029276m.g' => 'esa' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001038', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001038' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001038', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '10' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001038' ) ), 'genes' => array( 'A01p01820' => 'bna', 'A01p23200' => 'bna', 'A01p24490' => 'bna', 'A01p25970' => 'bna', 'A01p38280' => 'bna', 'A02p12560' => 'bna', 'A02p12570' => 'bna', 'A02p22710' => 'bna', 'A02p26950' => 'bna', 'A02p27290' => 'bna', 'A02p37020' => 'bna', 'A03p30780' => 'bna', 'A03p31860' => 'bna', 'A03p51100' => 'bna', 'A03p68060' => 'bna', 'A04p08060' => 'bna', 'A04p08070' => 'bna', 'A04p08290' => 'bna', 'A04p08430' => 'bna', 'A04p11350' => 'bna', 'A04p11380' => 'bna', 'A04p16280' => 'bna', 'A04p22180' => 'bna', 'A05p13620' => 'bna', 'A05p15580' => 'bna', 'A05p21480' => 'bna', 'A05p23600' => 'bna', 'A05p25760' => 'bna', 'A05p28250' => 'bna', 'A06p10190' => 'bna', 'A06p16020' => 'bna', 'A06p18460' => 'bna', 'A06p22310' => 'bna', 'A06p23100' => 'bna', 'A06p26760' => 'bna', 'A06p26770' => 'bna', 'A06p28660' => 'bna', 'A06p36110' => 'bna', 'A07p05940' => 'bna', 'A07p07690' => 'bna', 'A07p07700' => 'bna', 'A07p11770' => 'bna', 'A07p30050' => 'bna', 'A07p31540' => 'bna', 'A09p28390' => 'bna', 'A09p34780' => 'bna', 'A09p36510' => 'bna', 'A09p58370' => 'bna', 'A09p58380' => 'bna', 'A09p58390' => 'bna', 'A10p07420' => 'bna', 'A10p07430' => 'bna', 'A10p08770' => 'bna', 'A10p12160' => 'bna', 'A10p12170' => 'bna', 'A10p17410' => 'bna', 'AL3G41000' => 'aly', 'AL3G41200' => 'aly', 'AL5G24460' => 'aly', 'AL6G43780' => 'aly', 'AL6G49460' => 'aly', 'AL8G20830' => 'aly', 'AT2G07240' => 'ath', 'BcaB01g00119' => 'bca', 'BcaB01g00832' => 'bca', 'BcaB01g01124' => 'bca', 'BcaB01g01205' => 'bca', 'BcaB01g01303' => 'bca', 'BcaB01g01349' => 'bca', 'BcaB01g01350' => 'bca', 'BcaB01g01530' => 'bca', 'BcaB01g01601' => 'bca', 'BcaB01g01614' => 'bca', 'BcaB01g01698' => 'bca', 'BcaB01g01699' => 'bca', 'BcaB01g01825' => 'bca', 'BcaB01g01915' => 'bca', 'BcaB01g02361' => 'bca', 'BcaB01g02362' => 'bca', 'BcaB01g02419' => 'bca', 'BcaB01g03119' => 'bca', 'BcaB01g04196' => 'bca', 'BcaB02g06555' => 'bca', 'BcaB02g07256' => 'bca', 'BcaB02g10677' => 'bca', 'BcaB02g10814' => 'bca', 'BcaB02g10826' => 'bca', 'BcaB02g10843' => 'bca', 'BcaB02g10939' => 'bca', 'BcaB02g11035' => 'bca', 'BcaB02g11159' => 'bca', 'BcaB03g12379' => 'bca', 'BcaB03g13655' => 'bca', 'BcaB03g14886' => 'bca', 'BcaB03g15871' => 'bca', 'BcaB03g16061' => 'bca', 'BcaB03g16260' => 'bca', 'BcaB03g16464' => 'bca', 'BcaB03g16578' => 'bca', 'BcaB03g16620' => 'bca', 'BcaB04g17277' => 'bca', 'BcaB04g17339' => 'bca', 'BcaB04g17690' => 'bca', 'BcaB04g17766' => 'bca', 'BcaB04g17932' => 'bca', 'BcaB04g18537' => 'bca', 'BcaB04g19295' => 'bca', 'BcaB04g19444' => 'bca', 'BcaB04g19629' => 'bca', 'BcaB05g21586' => 'bca', 'BcaB05g22095' => 'bca', 'BcaB05g22891' => 'bca', 'BcaB05g23462' => 'bca', 'BcaB05g23512' => 'bca', 'BcaB05g23513' => 'bca', 'BcaB05g23592' => 'bca', 'BcaB05g23859' => 'bca', 'BcaB05g24425' => 'bca', 'BcaB05g25087' => 'bca', 'BcaB06g25472' => 'bca', 'BcaB06g26021' => 'bca', 'BcaB06g26608' => 'bca', 'BcaB06g26720' => 'bca', 'BcaB06g26737' => 'bca', 'BcaB06g26967' => 'bca', 'BcaB06g26982' => 'bca', 'BcaB06g27083' => 'bca', 'BcaB06g27191' => 'bca', 'BcaB06g27482' => 'bca', 'BcaB06g27710' => 'bca', 'BcaB06g27965' => 'bca', 'BcaB06g28131' => 'bca', 'BcaB06g28161' => 'bca', 'BcaB06g28199' => 'bca', 'BcaB06g28541' => 'bca', 'BcaB06g28542' => 'bca', 'BcaB06g28671' => 'bca', 'BcaB07g30174' => 'bca', 'BcaB07g31162' => 'bca', 'BcaB07g31487' => 'bca', 'BcaB07g31666' => 'bca', 'BcaB07g31818' => 'bca', 'BcaB07g32041' => 'bca', 'BcaB07g32042' => 'bca', 'BcaB07g32226' => 'bca', 'BcaB07g32567' => 'bca', 'BcaB07g32736' => 'bca', 'BcaB07g32737' => 'bca', 'BcaB07g32821' => 'bca', 'BcaB07g33328' => 'bca', 'BcaB07g33632' => 'bca', 'BcaB08g34364' => 'bca', 'BcaB08g34565' => 'bca', 'BcaB08g34623' => 'bca', 'BcaB08g34624' => 'bca', 'BcaB08g34710' => 'bca', 'BcaB08g34782' => 'bca', 'BcaB08g34797' => 'bca', 'BcaB08g34843' => 'bca', 'BcaB08g35144' => 'bca', 'BcaB08g35415' => 'bca', 'BcaB08g35416' => 'bca', 'BcaB08g35558' => 'bca', 'BcaB08g36368' => 'bca', 'BcaB08g36369' => 'bca', 'BcaB08g36731' => 'bca', 'BcaB08g36820' => 'bca', 'BcaB08g36899' => 'bca', 'BcaC01g02304' => 'bca', 'BcaC01g03478' => 'bca', 'BcaC01g03622' => 'bca', 'BcaC01g03710' => 'bca', 'BcaC01g03929' => 'bca', 'BcaC01g04978' => 'bca', 'BcaC01g04979' => 'bca', 'BcaC01g04980' => 'bca', 'BcaC02g07854' => 'bca', 'BcaC02g08100' => 'bca', 'BcaC03g14544' => 'bca', 'BcaC03g15415' => 'bca', 'BcaC03g15830' => 'bca', 'BcaC03g16183' => 'bca', 'BcaC03g17929' => 'bca', 'BcaC04g19622' => 'bca', 'BcaC04g19884' => 'bca', 'BcaC04g20293' => 'bca', 'BcaC04g20563' => 'bca', 'BcaC04g20742' => 'bca', 'BcaC04g21093' => 'bca', 'BcaC04g21460' => 'bca', 'BcaC04g21625' => 'bca', 'BcaC04g22192' => 'bca', 'BcaC04g23074' => 'bca', 'BcaC05g24335' => 'bca', 'BcaC05g24336' => 'bca', 'BcaC05g25183' => 'bca', 'BcaC05g25823' => 'bca', 'BcaC05g26744' => 'bca', 'BcaC05g27501' => 'bca', 'BcaC05g27690' => 'bca', 'BcaC05g27733' => 'bca', 'BcaC05g27866' => 'bca', 'BcaC05g28246' => 'bca', 'BcaC05g28787' => 'bca', 'BcaC06g32026' => 'bca', 'BcaC06g32416' => 'bca', 'BcaC06g33611' => 'bca', 'BcaC06g33888' => 'bca', 'BcaC06g34271' => 'bca', 'BcaC06g34914' => 'bca', 'BcaC06g35484' => 'bca', 'BcaC06g35567' => 'bca', 'BcaC06g35568' => 'bca', 'BcaC06g35698' => 'bca', 'BcaC06g35713' => 'bca', 'BcaC06g35714' => 'bca', 'BcaC06g36746' => 'bca', 'BcaC07g36920' => 'bca', 'BcaC07g37457' => 'bca', 'BcaC07g37762' => 'bca', 'BcaC07g38184' => 'bca', 'BcaC07g39263' => 'bca', 'BcaC08g43120' => 'bca', 'BcaC08g43867' => 'bca', 'BcaC08g44142' => 'bca', 'BcaC08g44172' => 'bca', 'BcaC08g44444' => 'bca', 'BcaC08g45228' => 'bca', 'BcaC08g46850' => 'bca', 'BcaC08g46978' => 'bca', 'BcaC08g46980' => 'bca', 'BcaC08g47005' => 'bca', 'BcaC09g48751' => 'bca', 'BcaC09g49024' => 'bca', 'BcaC09g49287' => 'bca', 'BcaC09g50083' => 'bca', 'BcaC09g51573' => 'bca', 'BcaC09g51594' => 'bca', 'BcaNung00229' => 'bca', 'BcaNung00284' => 'bca', 'BcaNung00468' => 'bca', 'BcaNung01360' => 'bca', 'BcaNung02282' => 'bca', 'BcaNung02449' => 'bca', 'BcaNung04782' => 'bca', 'BNapus_Darmor_BZH_scaffold_103p00080' => 'bna', 'BNapus_Darmor_BZH_scaffold_104p00080' => 'bna', 'BNapus_Darmor_BZH_scaffold_104p00090' => 'bna', 'BNapus_Darmor_BZH_scaffold_38p00010' => 'bna', 'BNapus_Darmor_BZH_scaffold_38p02600' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00150' => 'bna', 'BolC1t01121H' => 'bol', 'BolC1t01131H' => 'bol', 'BolC1t01148H' => 'bol', 'BolC1t01149H' => 'bol', 'BolC1t01902H' => 'bol', 'BolC1t02113H' => 'bol', 'BolC1t03990H' => 'bol', 'BolC1t04285H' => 'bol', 'BolC1t04589H' => 'bol', 'BolC1t05514H' => 'bol', 'BolC2t07185H' => 'bol', 'BolC2t07874H' => 'bol', 'BolC2t08169H' => 'bol', 'BolC2t09973H' => 'bol', 'BolC2t11143H' => 'bol', 'BolC2t11144H' => 'bol', 'BolC2t11145H' => 'bol', 'BolC2t11293H' => 'bol', 'BolC2t11347H' => 'bol', 'BolC3t14874H' => 'bol', 'BolC3t15494H' => 'bol', 'BolC3t15766H' => 'bol', 'BolC3t16968H' => 'bol', 'BolC3t16999H' => 'bol', 'BolC3t17485H' => 'bol', 'BolC3t18949H' => 'bol', 'BolC3t18950H' => 'bol', 'BolC3t19681H' => 'bol', 'BolC3t20321H' => 'bol', 'BolC3t20322H' => 'bol', 'BolC4t23574H' => 'bol', 'BolC4t23575H' => 'bol', 'BolC4t24024H' => 'bol', 'BolC4t25611H' => 'bol', 'BolC4t25613H' => 'bol', 'BolC4t26208H' => 'bol', 'BolC4t26248H' => 'bol', 'BolC4t27362H' => 'bol', 'BolC4t27749H' => 'bol', 'BolC5t30492H' => 'bol', 'BolC5t31711H' => 'bol', 'BolC5t31712H' => 'bol', 'BolC5t32344H' => 'bol', 'BolC5t32403H' => 'bol', 'BolC5t32608H' => 'bol', 'BolC5t33003H' => 'bol', 'BolC5t33633H' => 'bol', 'BolC5t33734H' => 'bol', 'BolC5t34489H' => 'bol', 'BolC6t36138H' => 'bol', 'BolC6t36405H' => 'bol', 'BolC6t36761H' => 'bol', 'BolC6t36762H' => 'bol', 'BolC6t37095H' => 'bol', 'BolC6t37789H' => 'bol', 'BolC6t37790H' => 'bol', 'BolC6t38914H' => 'bol', 'BolC6t38915H' => 'bol', 'BolC6t38916H' => 'bol', 'BolC7t40492H' => 'bol', 'BolC7t41164H' => 'bol', 'BolC7t41409H' => 'bol', 'BolC7t41410H' => 'bol', 'BolC7t41626H' => 'bol', 'BolC7t41648H' => 'bol', 'BolC7t41662H' => 'bol', 'BolC7t41684H' => 'bol', 'BolC7t41688H' => 'bol', 'BolC7t41839H' => 'bol', 'BolC7t41881H' => 'bol', 'BolC7t42043H' => 'bol', 'BolC7t42338H' => 'bol', 'BolC7t42339H' => 'bol', 'BolC7t42469H' => 'bol', 'BolC7t42716H' => 'bol', 'BolC7t43509H' => 'bol', 'BolC7t43636H' => 'bol', 'BolC7t44008H' => 'bol', 'BolC7t44009H' => 'bol', 'BolC7t44103H' => 'bol', 'BolC7t44104H' => 'bol', 'BolC7t44786H' => 'bol', 'BolC8t47295H' => 'bol', 'BolC8t47413H' => 'bol', 'BolC8t47777H' => 'bol', 'BolC8t48147H' => 'bol', 'BolC8t49550H' => 'bol', 'BolC9t54134H' => 'bol', 'BolC9t55139H' => 'bol', 'BolC9t55140H' => 'bol', 'BolC9t55517H' => 'bol', 'BolC9t55518H' => 'bol', 'BolC9t55839H' => 'bol', 'BolC9t56412H' => 'bol', 'BolC9t56621H' => 'bol', 'BolC9t56849H' => 'bol', 'BolC9t57089H' => 'bol', 'BolC9t57409H' => 'bol', 'BolC9t58082H' => 'bol', 'BolC9t58942H' => 'bol', 'BolC9t59718H' => 'bol', 'BolC9t59719H' => 'bol', 'BolC9t59720H' => 'bol', 'BraA01t02127Z' => 'bra', 'BraA01t02128Z' => 'bra', 'BraA01t02230Z' => 'bra', 'BraA01t02417Z' => 'bra', 'BraA01t02516Z' => 'bra', 'BraA01t02885Z' => 'bra', 'BraA02t06493Z' => 'bra', 'BraA02t06821Z' => 'bra', 'BraA02t07755Z' => 'bra', 'BraA02t08028Z' => 'bra', 'BraA02t08689Z' => 'bra', 'BraA02t08904Z' => 'bra', 'BraA02t08905Z' => 'bra', 'BraA02t08907Z' => 'bra', 'BraA03t11730Z' => 'bra', 'BraA03t12256Z' => 'bra', 'BraA03t13820Z' => 'bra', 'BraA03t13821Z' => 'bra', 'BraA04t16494Z' => 'bra', 'BraA04t16531Z' => 'bra', 'BraA04t16532Z' => 'bra', 'BraA04t16611Z' => 'bra', 'BraA04t16612Z' => 'bra', 'BraA04t16796Z' => 'bra', 'BraA04t16797Z' => 'bra', 'BraA04t16800Z' => 'bra', 'BraA04t17267Z' => 'bra', 'BraA04t17286Z' => 'bra', 'BraA04t18197Z' => 'bra', 'BraA04t18267Z' => 'bra', 'BraA05t19810Z' => 'bra', 'BraA05t20013Z' => 'bra', 'BraA05t20300Z' => 'bra', 'BraA05t20301Z' => 'bra', 'BraA05t20474Z' => 'bra', 'BraA05t21066Z' => 'bra', 'BraA05t21067Z' => 'bra', 'BraA05t21228Z' => 'bra', 'BraA05t21246Z' => 'bra', 'BraA05t21309Z' => 'bra', 'BraA05t21461Z' => 'bra', 'BraA05t21706Z' => 'bra', 'BraA05t22113Z' => 'bra', 'BraA06t24004Z' => 'bra', 'BraA06t24005Z' => 'bra', 'BraA06t24545Z' => 'bra', 'BraA06t24710Z' => 'bra', 'BraA06t25315Z' => 'bra', 'BraA06t25316Z' => 'bra', 'BraA06t25335Z' => 'bra', 'BraA06t25336Z' => 'bra', 'BraA06t25408Z' => 'bra', 'BraA06t25409Z' => 'bra', 'BraA06t25412Z' => 'bra', 'BraA06t25413Z' => 'bra', 'BraA06t25652Z' => 'bra', 'BraA06t25806Z' => 'bra', 'BraA07t28076Z' => 'bra', 'BraA07t28383Z' => 'bra', 'BraA07t28562Z' => 'bra', 'BraA07t28563Z' => 'bra', 'BraA07t28779Z' => 'bra', 'BraA07t28816Z' => 'bra', 'BraA07t28962Z' => 'bra', 'BraA07t29115Z' => 'bra', 'BraA08t32580Z' => 'bra', 'BraA08t32783Z' => 'bra', 'BraA08t32953Z' => 'bra', 'BraA08t34217Z' => 'bra', 'BraA08t34502Z' => 'bra', 'BraA09t36747Z' => 'bra', 'BraA09t41072Z' => 'bra', 'BraA10t43039Z' => 'bra', 'BraA10t43313Z' => 'bra', 'BraA10t43452Z' => 'bra', 'BraSC36t46061Z' => 'bra', 'BraSC36t46105Z' => 'bra', 'BraSC36t46106Z' => 'bra', 'BraSC37t46126Z' => 'bra', 'C01p11550' => 'bna', 'C01p11670' => 'bna', 'C01p21260' => 'bna', 'C01p21870' => 'bna', 'C01p40340' => 'bna', 'C01p42190' => 'bna', 'C01p43230' => 'bna', 'C01p43390' => 'bna', 'C01p46270' => 'bna', 'C02p24050' => 'bna', 'C02p30270' => 'bna', 'C02p30280' => 'bna', 'C02p31720' => 'bna', 'C02p39590' => 'bna', 'C02p45440' => 'bna', 'C02p45450' => 'bna', 'C02p52080' => 'bna', 'C03p31460' => 'bna', 'C03p31470' => 'bna', 'C03p34550' => 'bna', 'C03p47220' => 'bna', 'C03p52030' => 'bna', 'C03p52320' => 'bna', 'C03p66800' => 'bna', 'C03p66810' => 'bna', 'C03p66820' => 'bna', 'C03p74230' => 'bna', 'C03p74910' => 'bna', 'C04p20490' => 'bna', 'C04p20500' => 'bna', 'C04p40310' => 'bna', 'C04p40350' => 'bna', 'C04p42380' => 'bna', 'C04p46240' => 'bna', 'C04p57150' => 'bna', 'C04p58370' => 'bna', 'C04p58380' => 'bna', 'C05p12340' => 'bna', 'C05p34660' => 'bna', 'C05p34670' => 'bna', 'C05p36210' => 'bna', 'C05p36690' => 'bna', 'C05p37200' => 'bna', 'C05p37210' => 'bna', 'C05p38680' => 'bna', 'C05p40160' => 'bna', 'C05p42760' => 'bna', 'C05p48920' => 'bna', 'C05p48930' => 'bna', 'C06p00840' => 'bna', 'C06p00850' => 'bna', 'C06p00860' => 'bna', 'C06p03930' => 'bna', 'C06p06920' => 'bna', 'C06p10570' => 'bna', 'C06p12520' => 'bna', 'C06p18900' => 'bna', 'C06p26270' => 'bna', 'C06p26280' => 'bna', 'C06p38180' => 'bna', 'C07p07480' => 'bna', 'C07p09720' => 'bna', 'C07p11750' => 'bna', 'C07p11760' => 'bna', 'C07p11920' => 'bna', 'C07p12170' => 'bna', 'C07p12200' => 'bna', 'C07p12210' => 'bna', 'C07p13440' => 'bna', 'C07p15560' => 'bna', 'C07p18280' => 'bna', 'C07p18290' => 'bna', 'C07p19510' => 'bna', 'C07p21840' => 'bna', 'C07p21850' => 'bna', 'C07p30940' => 'bna', 'C07p34820' => 'bna', 'C07p35880' => 'bna', 'C07p42580' => 'bna', 'C07p60310' => 'bna', 'C08p05930' => 'bna', 'C08p05940' => 'bna', 'C08p05950' => 'bna', 'C08p09290' => 'bna', 'C08p17260' => 'bna', 'C08p22120' => 'bna', 'C08p22730' => 'bna', 'C08p27920' => 'bna', 'C09p12400' => 'bna', 'C09p12410' => 'bna', 'C09p20540' => 'bna', 'C09p22250' => 'bna', 'C09p26140' => 'bna', 'C09p26150' => 'bna', 'C09p35780' => 'bna', 'C09p36260' => 'bna', 'C09p37880' => 'bna', 'C09p39680' => 'bna', 'C09p39690' => 'bna', 'C09p42070' => 'bna', 'C09p45390' => 'bna', 'C09p50150' => 'bna', 'C09p52160' => 'bna', 'C09p60390' => 'bna', 'C09p68940' => 'bna', 'C09p68950' => 'bna', 'C09p69750' => 'bna', 'CARHR034500' => 'chi', 'CARHR034790' => 'chi', 'CARHR104490' => 'chi', 'CARHR120350' => 'chi', 'CARHR153260' => 'chi', 'CARHR182390' => 'chi', 'CARHR216710' => 'chi', 'Carub.0004s1123' => 'cru', 'Carub.0007s2445' => 'cru', 'Carub.0013s0014' => 'cru', 'Sp1g37020' => 'spa', 'Sp3g26840' => 'spa', 'Sp4g09680' => 'spa', 'Sp4g09840' => 'spa', 'Sp5g17750' => 'spa', 'Sp5g23310' => 'spa', 'Sp6g06510' => 'spa', 'Sp6g11090' => 'spa', 'SpUn0001_0050' => 'spa', 'Thhalv10000713m.g' => 'esa', 'Thhalv10001261m.g' => 'esa', 'Thhalv10002173m.g' => 'esa', 'Thhalv10002299m.g' => 'esa', 'Thhalv10002771m.g' => 'esa', 'Thhalv10002975m.g' => 'esa', 'Thhalv10003015m.g' => 'esa', 'Thhalv10003093m.g' => 'esa', 'Thhalv10003372m.g' => 'esa', 'Thhalv10003408m.g' => 'esa', 'Thhalv10009967m.g' => 'esa', 'Thhalv10010036m.g' => 'esa', 'Thhalv10011074m.g' => 'esa', 'Thhalv10012295m.g' => 'esa', 'Thhalv10015415m.g' => 'esa', 'Thhalv10015447m.g' => 'esa', 'Thhalv10015533m.g' => 'esa', 'Thhalv10015691m.g' => 'esa', 'Thhalv10022419m.g' => 'esa', 'Thhalv10023140m.g' => 'esa', 'Thhalv10023958m.g' => 'esa', 'Thhalv10023964m.g' => 'esa', 'Thhalv10023977m.g' => 'esa', 'Thhalv10029129m.g' => 'esa', 'Thhalv10029131m.g' => 'esa', 'Thhalv10029276m.g' => 'esa' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001038' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001038' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001038' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001038' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001038', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '10' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p01820' => 'bna', 'A01p23200' => 'bna', 'A01p24490' => 'bna', 'A01p25970' => 'bna', 'A01p38280' => 'bna', 'A02p12560' => 'bna', 'A02p12570' => 'bna', 'A02p22710' => 'bna', 'A02p26950' => 'bna', 'A02p27290' => 'bna', 'A02p37020' => 'bna', 'A03p30780' => 'bna', 'A03p31860' => 'bna', 'A03p51100' => 'bna', 'A03p68060' => 'bna', 'A04p08060' => 'bna', 'A04p08070' => 'bna', 'A04p08290' => 'bna', 'A04p08430' => 'bna', 'A04p11350' => 'bna', 'A04p11380' => 'bna', 'A04p16280' => 'bna', 'A04p22180' => 'bna', 'A05p13620' => 'bna', 'A05p15580' => 'bna', 'A05p21480' => 'bna', 'A05p23600' => 'bna', 'A05p25760' => 'bna', 'A05p28250' => 'bna', 'A06p10190' => 'bna', 'A06p16020' => 'bna', 'A06p18460' => 'bna', 'A06p22310' => 'bna', 'A06p23100' => 'bna', 'A06p26760' => 'bna', 'A06p26770' => 'bna', 'A06p28660' => 'bna', 'A06p36110' => 'bna', 'A07p05940' => 'bna', 'A07p07690' => 'bna', 'A07p07700' => 'bna', 'A07p11770' => 'bna', 'A07p30050' => 'bna', 'A07p31540' => 'bna', 'A09p28390' => 'bna', 'A09p34780' => 'bna', 'A09p36510' => 'bna', 'A09p58370' => 'bna', 'A09p58380' => 'bna', 'A09p58390' => 'bna', 'A10p07420' => 'bna', 'A10p07430' => 'bna', 'A10p08770' => 'bna', 'A10p12160' => 'bna', 'A10p12170' => 'bna', 'A10p17410' => 'bna', 'AL3G41000' => 'aly', 'AL3G41200' => 'aly', 'AL5G24460' => 'aly', 'AL6G43780' => 'aly', 'AL6G49460' => 'aly', 'AL8G20830' => 'aly', 'AT2G07240' => 'ath', 'BcaB01g00119' => 'bca', 'BcaB01g00832' => 'bca', 'BcaB01g01124' => 'bca', 'BcaB01g01205' => 'bca', 'BcaB01g01303' => 'bca', 'BcaB01g01349' => 'bca', 'BcaB01g01350' => 'bca', 'BcaB01g01530' => 'bca', 'BcaB01g01601' => 'bca', 'BcaB01g01614' => 'bca', 'BcaB01g01698' => 'bca', 'BcaB01g01699' => 'bca', 'BcaB01g01825' => 'bca', 'BcaB01g01915' => 'bca', 'BcaB01g02361' => 'bca', 'BcaB01g02362' => 'bca', 'BcaB01g02419' => 'bca', 'BcaB01g03119' => 'bca', 'BcaB01g04196' => 'bca', 'BcaB02g06555' => 'bca', 'BcaB02g07256' => 'bca', 'BcaB02g10677' => 'bca', 'BcaB02g10814' => 'bca', 'BcaB02g10826' => 'bca', 'BcaB02g10843' => 'bca', 'BcaB02g10939' => 'bca', 'BcaB02g11035' => 'bca', 'BcaB02g11159' => 'bca', 'BcaB03g12379' => 'bca', 'BcaB03g13655' => 'bca', 'BcaB03g14886' => 'bca', 'BcaB03g15871' => 'bca', 'BcaB03g16061' => 'bca', 'BcaB03g16260' => 'bca', 'BcaB03g16464' => 'bca', 'BcaB03g16578' => 'bca', 'BcaB03g16620' => 'bca', 'BcaB04g17277' => 'bca', 'BcaB04g17339' => 'bca', 'BcaB04g17690' => 'bca', 'BcaB04g17766' => 'bca', 'BcaB04g17932' => 'bca', 'BcaB04g18537' => 'bca', 'BcaB04g19295' => 'bca', 'BcaB04g19444' => 'bca', 'BcaB04g19629' => 'bca', 'BcaB05g21586' => 'bca', 'BcaB05g22095' => 'bca', 'BcaB05g22891' => 'bca', 'BcaB05g23462' => 'bca', 'BcaB05g23512' => 'bca', 'BcaB05g23513' => 'bca', 'BcaB05g23592' => 'bca', 'BcaB05g23859' => 'bca', 'BcaB05g24425' => 'bca', 'BcaB05g25087' => 'bca', 'BcaB06g25472' => 'bca', 'BcaB06g26021' => 'bca', 'BcaB06g26608' => 'bca', 'BcaB06g26720' => 'bca', 'BcaB06g26737' => 'bca', 'BcaB06g26967' => 'bca', 'BcaB06g26982' => 'bca', 'BcaB06g27083' => 'bca', 'BcaB06g27191' => 'bca', 'BcaB06g27482' => 'bca', 'BcaB06g27710' => 'bca', 'BcaB06g27965' => 'bca', 'BcaB06g28131' => 'bca', 'BcaB06g28161' => 'bca', 'BcaB06g28199' => 'bca', 'BcaB06g28541' => 'bca', 'BcaB06g28542' => 'bca', 'BcaB06g28671' => 'bca', 'BcaB07g30174' => 'bca', 'BcaB07g31162' => 'bca', 'BcaB07g31487' => 'bca', 'BcaB07g31666' => 'bca', 'BcaB07g31818' => 'bca', 'BcaB07g32041' => 'bca', 'BcaB07g32042' => 'bca', 'BcaB07g32226' => 'bca', 'BcaB07g32567' => 'bca', 'BcaB07g32736' => 'bca', 'BcaB07g32737' => 'bca', 'BcaB07g32821' => 'bca', 'BcaB07g33328' => 'bca', 'BcaB07g33632' => 'bca', 'BcaB08g34364' => 'bca', 'BcaB08g34565' => 'bca', 'BcaB08g34623' => 'bca', 'BcaB08g34624' => 'bca', 'BcaB08g34710' => 'bca', 'BcaB08g34782' => 'bca', 'BcaB08g34797' => 'bca', 'BcaB08g34843' => 'bca', 'BcaB08g35144' => 'bca', 'BcaB08g35415' => 'bca', 'BcaB08g35416' => 'bca', 'BcaB08g35558' => 'bca', 'BcaB08g36368' => 'bca', 'BcaB08g36369' => 'bca', 'BcaB08g36731' => 'bca', 'BcaB08g36820' => 'bca', 'BcaB08g36899' => 'bca', 'BcaC01g02304' => 'bca', 'BcaC01g03478' => 'bca', 'BcaC01g03622' => 'bca', 'BcaC01g03710' => 'bca', 'BcaC01g03929' => 'bca', 'BcaC01g04978' => 'bca', 'BcaC01g04979' => 'bca', 'BcaC01g04980' => 'bca', 'BcaC02g07854' => 'bca', 'BcaC02g08100' => 'bca', 'BcaC03g14544' => 'bca', 'BcaC03g15415' => 'bca', 'BcaC03g15830' => 'bca', 'BcaC03g16183' => 'bca', 'BcaC03g17929' => 'bca', 'BcaC04g19622' => 'bca', 'BcaC04g19884' => 'bca', 'BcaC04g20293' => 'bca', 'BcaC04g20563' => 'bca', 'BcaC04g20742' => 'bca', 'BcaC04g21093' => 'bca', 'BcaC04g21460' => 'bca', 'BcaC04g21625' => 'bca', 'BcaC04g22192' => 'bca', 'BcaC04g23074' => 'bca', 'BcaC05g24335' => 'bca', 'BcaC05g24336' => 'bca', 'BcaC05g25183' => 'bca', 'BcaC05g25823' => 'bca', 'BcaC05g26744' => 'bca', 'BcaC05g27501' => 'bca', 'BcaC05g27690' => 'bca', 'BcaC05g27733' => 'bca', 'BcaC05g27866' => 'bca', 'BcaC05g28246' => 'bca', 'BcaC05g28787' => 'bca', 'BcaC06g32026' => 'bca', 'BcaC06g32416' => 'bca', 'BcaC06g33611' => 'bca', 'BcaC06g33888' => 'bca', 'BcaC06g34271' => 'bca', 'BcaC06g34914' => 'bca', 'BcaC06g35484' => 'bca', 'BcaC06g35567' => 'bca', 'BcaC06g35568' => 'bca', 'BcaC06g35698' => 'bca', 'BcaC06g35713' => 'bca', 'BcaC06g35714' => 'bca', 'BcaC06g36746' => 'bca', 'BcaC07g36920' => 'bca', 'BcaC07g37457' => 'bca', 'BcaC07g37762' => 'bca', 'BcaC07g38184' => 'bca', 'BcaC07g39263' => 'bca', 'BcaC08g43120' => 'bca', 'BcaC08g43867' => 'bca', 'BcaC08g44142' => 'bca', 'BcaC08g44172' => 'bca', 'BcaC08g44444' => 'bca', 'BcaC08g45228' => 'bca', 'BcaC08g46850' => 'bca', 'BcaC08g46978' => 'bca', 'BcaC08g46980' => 'bca', 'BcaC08g47005' => 'bca', 'BcaC09g48751' => 'bca', 'BcaC09g49024' => 'bca', 'BcaC09g49287' => 'bca', 'BcaC09g50083' => 'bca', 'BcaC09g51573' => 'bca', 'BcaC09g51594' => 'bca', 'BcaNung00229' => 'bca', 'BcaNung00284' => 'bca', 'BcaNung00468' => 'bca', 'BcaNung01360' => 'bca', 'BcaNung02282' => 'bca', 'BcaNung02449' => 'bca', 'BcaNung04782' => 'bca', 'BNapus_Darmor_BZH_scaffold_103p00080' => 'bna', 'BNapus_Darmor_BZH_scaffold_104p00080' => 'bna', 'BNapus_Darmor_BZH_scaffold_104p00090' => 'bna', 'BNapus_Darmor_BZH_scaffold_38p00010' => 'bna', 'BNapus_Darmor_BZH_scaffold_38p02600' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00150' => 'bna', 'BolC1t01121H' => 'bol', 'BolC1t01131H' => 'bol', 'BolC1t01148H' => 'bol', 'BolC1t01149H' => 'bol', 'BolC1t01902H' => 'bol', 'BolC1t02113H' => 'bol', 'BolC1t03990H' => 'bol', 'BolC1t04285H' => 'bol', 'BolC1t04589H' => 'bol', 'BolC1t05514H' => 'bol', 'BolC2t07185H' => 'bol', 'BolC2t07874H' => 'bol', 'BolC2t08169H' => 'bol', 'BolC2t09973H' => 'bol', 'BolC2t11143H' => 'bol', 'BolC2t11144H' => 'bol', 'BolC2t11145H' => 'bol', 'BolC2t11293H' => 'bol', 'BolC2t11347H' => 'bol', 'BolC3t14874H' => 'bol', 'BolC3t15494H' => 'bol', 'BolC3t15766H' => 'bol', 'BolC3t16968H' => 'bol', 'BolC3t16999H' => 'bol', 'BolC3t17485H' => 'bol', 'BolC3t18949H' => 'bol', 'BolC3t18950H' => 'bol', 'BolC3t19681H' => 'bol', 'BolC3t20321H' => 'bol', 'BolC3t20322H' => 'bol', 'BolC4t23574H' => 'bol', 'BolC4t23575H' => 'bol', 'BolC4t24024H' => 'bol', 'BolC4t25611H' => 'bol', 'BolC4t25613H' => 'bol', 'BolC4t26208H' => 'bol', 'BolC4t26248H' => 'bol', 'BolC4t27362H' => 'bol', 'BolC4t27749H' => 'bol', 'BolC5t30492H' => 'bol', 'BolC5t31711H' => 'bol', 'BolC5t31712H' => 'bol', 'BolC5t32344H' => 'bol', 'BolC5t32403H' => 'bol', 'BolC5t32608H' => 'bol', 'BolC5t33003H' => 'bol', 'BolC5t33633H' => 'bol', 'BolC5t33734H' => 'bol', 'BolC5t34489H' => 'bol', 'BolC6t36138H' => 'bol', 'BolC6t36405H' => 'bol', 'BolC6t36761H' => 'bol', 'BolC6t36762H' => 'bol', 'BolC6t37095H' => 'bol', 'BolC6t37789H' => 'bol', 'BolC6t37790H' => 'bol', 'BolC6t38914H' => 'bol', 'BolC6t38915H' => 'bol', 'BolC6t38916H' => 'bol', 'BolC7t40492H' => 'bol', 'BolC7t41164H' => 'bol', 'BolC7t41409H' => 'bol', 'BolC7t41410H' => 'bol', 'BolC7t41626H' => 'bol', 'BolC7t41648H' => 'bol', 'BolC7t41662H' => 'bol', 'BolC7t41684H' => 'bol', 'BolC7t41688H' => 'bol', 'BolC7t41839H' => 'bol', 'BolC7t41881H' => 'bol', 'BolC7t42043H' => 'bol', 'BolC7t42338H' => 'bol', 'BolC7t42339H' => 'bol', 'BolC7t42469H' => 'bol', 'BolC7t42716H' => 'bol', 'BolC7t43509H' => 'bol', 'BolC7t43636H' => 'bol', 'BolC7t44008H' => 'bol', 'BolC7t44009H' => 'bol', 'BolC7t44103H' => 'bol', 'BolC7t44104H' => 'bol', 'BolC7t44786H' => 'bol', 'BolC8t47295H' => 'bol', 'BolC8t47413H' => 'bol', 'BolC8t47777H' => 'bol', 'BolC8t48147H' => 'bol', 'BolC8t49550H' => 'bol', 'BolC9t54134H' => 'bol', 'BolC9t55139H' => 'bol', 'BolC9t55140H' => 'bol', 'BolC9t55517H' => 'bol', 'BolC9t55518H' => 'bol', 'BolC9t55839H' => 'bol', 'BolC9t56412H' => 'bol', 'BolC9t56621H' => 'bol', 'BolC9t56849H' => 'bol', 'BolC9t57089H' => 'bol', 'BolC9t57409H' => 'bol', 'BolC9t58082H' => 'bol', 'BolC9t58942H' => 'bol', 'BolC9t59718H' => 'bol', 'BolC9t59719H' => 'bol', 'BolC9t59720H' => 'bol', 'BraA01t02127Z' => 'bra', 'BraA01t02128Z' => 'bra', 'BraA01t02230Z' => 'bra', 'BraA01t02417Z' => 'bra', 'BraA01t02516Z' => 'bra', 'BraA01t02885Z' => 'bra', 'BraA02t06493Z' => 'bra', 'BraA02t06821Z' => 'bra', 'BraA02t07755Z' => 'bra', 'BraA02t08028Z' => 'bra', 'BraA02t08689Z' => 'bra', 'BraA02t08904Z' => 'bra', 'BraA02t08905Z' => 'bra', 'BraA02t08907Z' => 'bra', 'BraA03t11730Z' => 'bra', 'BraA03t12256Z' => 'bra', 'BraA03t13820Z' => 'bra', 'BraA03t13821Z' => 'bra', 'BraA04t16494Z' => 'bra', 'BraA04t16531Z' => 'bra', 'BraA04t16532Z' => 'bra', 'BraA04t16611Z' => 'bra', 'BraA04t16612Z' => 'bra', 'BraA04t16796Z' => 'bra', 'BraA04t16797Z' => 'bra', 'BraA04t16800Z' => 'bra', 'BraA04t17267Z' => 'bra', 'BraA04t17286Z' => 'bra', 'BraA04t18197Z' => 'bra', 'BraA04t18267Z' => 'bra', 'BraA05t19810Z' => 'bra', 'BraA05t20013Z' => 'bra', 'BraA05t20300Z' => 'bra', 'BraA05t20301Z' => 'bra', 'BraA05t20474Z' => 'bra', 'BraA05t21066Z' => 'bra', 'BraA05t21067Z' => 'bra', 'BraA05t21228Z' => 'bra', 'BraA05t21246Z' => 'bra', 'BraA05t21309Z' => 'bra', 'BraA05t21461Z' => 'bra', 'BraA05t21706Z' => 'bra', 'BraA05t22113Z' => 'bra', 'BraA06t24004Z' => 'bra', 'BraA06t24005Z' => 'bra', 'BraA06t24545Z' => 'bra', 'BraA06t24710Z' => 'bra', 'BraA06t25315Z' => 'bra', 'BraA06t25316Z' => 'bra', 'BraA06t25335Z' => 'bra', 'BraA06t25336Z' => 'bra', 'BraA06t25408Z' => 'bra', 'BraA06t25409Z' => 'bra', 'BraA06t25412Z' => 'bra', 'BraA06t25413Z' => 'bra', 'BraA06t25652Z' => 'bra', 'BraA06t25806Z' => 'bra', 'BraA07t28076Z' => 'bra', 'BraA07t28383Z' => 'bra', 'BraA07t28562Z' => 'bra', 'BraA07t28563Z' => 'bra', 'BraA07t28779Z' => 'bra', 'BraA07t28816Z' => 'bra', 'BraA07t28962Z' => 'bra', 'BraA07t29115Z' => 'bra', 'BraA08t32580Z' => 'bra', 'BraA08t32783Z' => 'bra', 'BraA08t32953Z' => 'bra', 'BraA08t34217Z' => 'bra', 'BraA08t34502Z' => 'bra', 'BraA09t36747Z' => 'bra', 'BraA09t41072Z' => 'bra', 'BraA10t43039Z' => 'bra', 'BraA10t43313Z' => 'bra', 'BraA10t43452Z' => 'bra', 'BraSC36t46061Z' => 'bra', 'BraSC36t46105Z' => 'bra', 'BraSC36t46106Z' => 'bra', 'BraSC37t46126Z' => 'bra', 'C01p11550' => 'bna', 'C01p11670' => 'bna', 'C01p21260' => 'bna', 'C01p21870' => 'bna', 'C01p40340' => 'bna', 'C01p42190' => 'bna', 'C01p43230' => 'bna', 'C01p43390' => 'bna', 'C01p46270' => 'bna', 'C02p24050' => 'bna', 'C02p30270' => 'bna', 'C02p30280' => 'bna', 'C02p31720' => 'bna', 'C02p39590' => 'bna', 'C02p45440' => 'bna', 'C02p45450' => 'bna', 'C02p52080' => 'bna', 'C03p31460' => 'bna', 'C03p31470' => 'bna', 'C03p34550' => 'bna', 'C03p47220' => 'bna', 'C03p52030' => 'bna', 'C03p52320' => 'bna', 'C03p66800' => 'bna', 'C03p66810' => 'bna', 'C03p66820' => 'bna', 'C03p74230' => 'bna', 'C03p74910' => 'bna', 'C04p20490' => 'bna', 'C04p20500' => 'bna', 'C04p40310' => 'bna', 'C04p40350' => 'bna', 'C04p42380' => 'bna', 'C04p46240' => 'bna', 'C04p57150' => 'bna', 'C04p58370' => 'bna', 'C04p58380' => 'bna', 'C05p12340' => 'bna', 'C05p34660' => 'bna', 'C05p34670' => 'bna', 'C05p36210' => 'bna', 'C05p36690' => 'bna', 'C05p37200' => 'bna', 'C05p37210' => 'bna', 'C05p38680' => 'bna', 'C05p40160' => 'bna', 'C05p42760' => 'bna', 'C05p48920' => 'bna', 'C05p48930' => 'bna', 'C06p00840' => 'bna', 'C06p00850' => 'bna', 'C06p00860' => 'bna', 'C06p03930' => 'bna', 'C06p06920' => 'bna', 'C06p10570' => 'bna', 'C06p12520' => 'bna', 'C06p18900' => 'bna', 'C06p26270' => 'bna', 'C06p26280' => 'bna', 'C06p38180' => 'bna', 'C07p07480' => 'bna', 'C07p09720' => 'bna', 'C07p11750' => 'bna', 'C07p11760' => 'bna', 'C07p11920' => 'bna', 'C07p12170' => 'bna', 'C07p12200' => 'bna', 'C07p12210' => 'bna', 'C07p13440' => 'bna', 'C07p15560' => 'bna', 'C07p18280' => 'bna', 'C07p18290' => 'bna', 'C07p19510' => 'bna', 'C07p21840' => 'bna', 'C07p21850' => 'bna', 'C07p30940' => 'bna', 'C07p34820' => 'bna', 'C07p35880' => 'bna', 'C07p42580' => 'bna', 'C07p60310' => 'bna', 'C08p05930' => 'bna', 'C08p05940' => 'bna', 'C08p05950' => 'bna', 'C08p09290' => 'bna', 'C08p17260' => 'bna', 'C08p22120' => 'bna', 'C08p22730' => 'bna', 'C08p27920' => 'bna', 'C09p12400' => 'bna', 'C09p12410' => 'bna', 'C09p20540' => 'bna', 'C09p22250' => 'bna', 'C09p26140' => 'bna', 'C09p26150' => 'bna', 'C09p35780' => 'bna', 'C09p36260' => 'bna', 'C09p37880' => 'bna', 'C09p39680' => 'bna', 'C09p39690' => 'bna', 'C09p42070' => 'bna', 'C09p45390' => 'bna', 'C09p50150' => 'bna', 'C09p52160' => 'bna', 'C09p60390' => 'bna', 'C09p68940' => 'bna', 'C09p68950' => 'bna', 'C09p69750' => 'bna', 'CARHR034500' => 'chi', 'CARHR034790' => 'chi', 'CARHR104490' => 'chi', 'CARHR120350' => 'chi', 'CARHR153260' => 'chi', 'CARHR182390' => 'chi', 'CARHR216710' => 'chi', 'Carub.0004s1123' => 'cru', 'Carub.0007s2445' => 'cru', 'Carub.0013s0014' => 'cru', 'Sp1g37020' => 'spa', 'Sp3g26840' => 'spa', 'Sp4g09680' => 'spa', 'Sp4g09840' => 'spa', 'Sp5g17750' => 'spa', 'Sp5g23310' => 'spa', 'Sp6g06510' => 'spa', 'Sp6g11090' => 'spa', 'SpUn0001_0050' => 'spa', 'Thhalv10000713m.g' => 'esa', 'Thhalv10001261m.g' => 'esa', 'Thhalv10002173m.g' => 'esa', 'Thhalv10002299m.g' => 'esa', 'Thhalv10002771m.g' => 'esa', 'Thhalv10002975m.g' => 'esa', 'Thhalv10003015m.g' => 'esa', 'Thhalv10003093m.g' => 'esa', 'Thhalv10003372m.g' => 'esa', 'Thhalv10003408m.g' => 'esa', 'Thhalv10009967m.g' => 'esa', 'Thhalv10010036m.g' => 'esa', 'Thhalv10011074m.g' => 'esa', 'Thhalv10012295m.g' => 'esa', 'Thhalv10015415m.g' => 'esa', 'Thhalv10015447m.g' => 'esa', 'Thhalv10015533m.g' => 'esa', 'Thhalv10015691m.g' => 'esa', 'Thhalv10022419m.g' => 'esa', 'Thhalv10023140m.g' => 'esa', 'Thhalv10023958m.g' => 'esa', 'Thhalv10023964m.g' => 'esa', 'Thhalv10023977m.g' => 'esa', 'Thhalv10029129m.g' => 'esa', 'Thhalv10029131m.g' => 'esa', 'Thhalv10029276m.g' => 'esa' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001038', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001038' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001038', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '10' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001038' ) ), 'genes' => array( 'A01p01820' => 'bna', 'A01p23200' => 'bna', 'A01p24490' => 'bna', 'A01p25970' => 'bna', 'A01p38280' => 'bna', 'A02p12560' => 'bna', 'A02p12570' => 'bna', 'A02p22710' => 'bna', 'A02p26950' => 'bna', 'A02p27290' => 'bna', 'A02p37020' => 'bna', 'A03p30780' => 'bna', 'A03p31860' => 'bna', 'A03p51100' => 'bna', 'A03p68060' => 'bna', 'A04p08060' => 'bna', 'A04p08070' => 'bna', 'A04p08290' => 'bna', 'A04p08430' => 'bna', 'A04p11350' => 'bna', 'A04p11380' => 'bna', 'A04p16280' => 'bna', 'A04p22180' => 'bna', 'A05p13620' => 'bna', 'A05p15580' => 'bna', 'A05p21480' => 'bna', 'A05p23600' => 'bna', 'A05p25760' => 'bna', 'A05p28250' => 'bna', 'A06p10190' => 'bna', 'A06p16020' => 'bna', 'A06p18460' => 'bna', 'A06p22310' => 'bna', 'A06p23100' => 'bna', 'A06p26760' => 'bna', 'A06p26770' => 'bna', 'A06p28660' => 'bna', 'A06p36110' => 'bna', 'A07p05940' => 'bna', 'A07p07690' => 'bna', 'A07p07700' => 'bna', 'A07p11770' => 'bna', 'A07p30050' => 'bna', 'A07p31540' => 'bna', 'A09p28390' => 'bna', 'A09p34780' => 'bna', 'A09p36510' => 'bna', 'A09p58370' => 'bna', 'A09p58380' => 'bna', 'A09p58390' => 'bna', 'A10p07420' => 'bna', 'A10p07430' => 'bna', 'A10p08770' => 'bna', 'A10p12160' => 'bna', 'A10p12170' => 'bna', 'A10p17410' => 'bna', 'AL3G41000' => 'aly', 'AL3G41200' => 'aly', 'AL5G24460' => 'aly', 'AL6G43780' => 'aly', 'AL6G49460' => 'aly', 'AL8G20830' => 'aly', 'AT2G07240' => 'ath', 'BcaB01g00119' => 'bca', 'BcaB01g00832' => 'bca', 'BcaB01g01124' => 'bca', 'BcaB01g01205' => 'bca', 'BcaB01g01303' => 'bca', 'BcaB01g01349' => 'bca', 'BcaB01g01350' => 'bca', 'BcaB01g01530' => 'bca', 'BcaB01g01601' => 'bca', 'BcaB01g01614' => 'bca', 'BcaB01g01698' => 'bca', 'BcaB01g01699' => 'bca', 'BcaB01g01825' => 'bca', 'BcaB01g01915' => 'bca', 'BcaB01g02361' => 'bca', 'BcaB01g02362' => 'bca', 'BcaB01g02419' => 'bca', 'BcaB01g03119' => 'bca', 'BcaB01g04196' => 'bca', 'BcaB02g06555' => 'bca', 'BcaB02g07256' => 'bca', 'BcaB02g10677' => 'bca', 'BcaB02g10814' => 'bca', 'BcaB02g10826' => 'bca', 'BcaB02g10843' => 'bca', 'BcaB02g10939' => 'bca', 'BcaB02g11035' => 'bca', 'BcaB02g11159' => 'bca', 'BcaB03g12379' => 'bca', 'BcaB03g13655' => 'bca', 'BcaB03g14886' => 'bca', 'BcaB03g15871' => 'bca', 'BcaB03g16061' => 'bca', 'BcaB03g16260' => 'bca', 'BcaB03g16464' => 'bca', 'BcaB03g16578' => 'bca', 'BcaB03g16620' => 'bca', 'BcaB04g17277' => 'bca', 'BcaB04g17339' => 'bca', 'BcaB04g17690' => 'bca', 'BcaB04g17766' => 'bca', 'BcaB04g17932' => 'bca', 'BcaB04g18537' => 'bca', 'BcaB04g19295' => 'bca', 'BcaB04g19444' => 'bca', 'BcaB04g19629' => 'bca', 'BcaB05g21586' => 'bca', 'BcaB05g22095' => 'bca', 'BcaB05g22891' => 'bca', 'BcaB05g23462' => 'bca', 'BcaB05g23512' => 'bca', 'BcaB05g23513' => 'bca', 'BcaB05g23592' => 'bca', 'BcaB05g23859' => 'bca', 'BcaB05g24425' => 'bca', 'BcaB05g25087' => 'bca', 'BcaB06g25472' => 'bca', 'BcaB06g26021' => 'bca', 'BcaB06g26608' => 'bca', 'BcaB06g26720' => 'bca', 'BcaB06g26737' => 'bca', 'BcaB06g26967' => 'bca', 'BcaB06g26982' => 'bca', 'BcaB06g27083' => 'bca', 'BcaB06g27191' => 'bca', 'BcaB06g27482' => 'bca', 'BcaB06g27710' => 'bca', 'BcaB06g27965' => 'bca', 'BcaB06g28131' => 'bca', 'BcaB06g28161' => 'bca', 'BcaB06g28199' => 'bca', 'BcaB06g28541' => 'bca', 'BcaB06g28542' => 'bca', 'BcaB06g28671' => 'bca', 'BcaB07g30174' => 'bca', 'BcaB07g31162' => 'bca', 'BcaB07g31487' => 'bca', 'BcaB07g31666' => 'bca', 'BcaB07g31818' => 'bca', 'BcaB07g32041' => 'bca', 'BcaB07g32042' => 'bca', 'BcaB07g32226' => 'bca', 'BcaB07g32567' => 'bca', 'BcaB07g32736' => 'bca', 'BcaB07g32737' => 'bca', 'BcaB07g32821' => 'bca', 'BcaB07g33328' => 'bca', 'BcaB07g33632' => 'bca', 'BcaB08g34364' => 'bca', 'BcaB08g34565' => 'bca', 'BcaB08g34623' => 'bca', 'BcaB08g34624' => 'bca', 'BcaB08g34710' => 'bca', 'BcaB08g34782' => 'bca', 'BcaB08g34797' => 'bca', 'BcaB08g34843' => 'bca', 'BcaB08g35144' => 'bca', 'BcaB08g35415' => 'bca', 'BcaB08g35416' => 'bca', 'BcaB08g35558' => 'bca', 'BcaB08g36368' => 'bca', 'BcaB08g36369' => 'bca', 'BcaB08g36731' => 'bca', 'BcaB08g36820' => 'bca', 'BcaB08g36899' => 'bca', 'BcaC01g02304' => 'bca', 'BcaC01g03478' => 'bca', 'BcaC01g03622' => 'bca', 'BcaC01g03710' => 'bca', 'BcaC01g03929' => 'bca', 'BcaC01g04978' => 'bca', 'BcaC01g04979' => 'bca', 'BcaC01g04980' => 'bca', 'BcaC02g07854' => 'bca', 'BcaC02g08100' => 'bca', 'BcaC03g14544' => 'bca', 'BcaC03g15415' => 'bca', 'BcaC03g15830' => 'bca', 'BcaC03g16183' => 'bca', 'BcaC03g17929' => 'bca', 'BcaC04g19622' => 'bca', 'BcaC04g19884' => 'bca', 'BcaC04g20293' => 'bca', 'BcaC04g20563' => 'bca', 'BcaC04g20742' => 'bca', 'BcaC04g21093' => 'bca', 'BcaC04g21460' => 'bca', 'BcaC04g21625' => 'bca', 'BcaC04g22192' => 'bca', 'BcaC04g23074' => 'bca', 'BcaC05g24335' => 'bca', 'BcaC05g24336' => 'bca', 'BcaC05g25183' => 'bca', 'BcaC05g25823' => 'bca', 'BcaC05g26744' => 'bca', 'BcaC05g27501' => 'bca', 'BcaC05g27690' => 'bca', 'BcaC05g27733' => 'bca', 'BcaC05g27866' => 'bca', 'BcaC05g28246' => 'bca', 'BcaC05g28787' => 'bca', 'BcaC06g32026' => 'bca', 'BcaC06g32416' => 'bca', 'BcaC06g33611' => 'bca', 'BcaC06g33888' => 'bca', 'BcaC06g34271' => 'bca', 'BcaC06g34914' => 'bca', 'BcaC06g35484' => 'bca', 'BcaC06g35567' => 'bca', 'BcaC06g35568' => 'bca', 'BcaC06g35698' => 'bca', 'BcaC06g35713' => 'bca', 'BcaC06g35714' => 'bca', 'BcaC06g36746' => 'bca', 'BcaC07g36920' => 'bca', 'BcaC07g37457' => 'bca', 'BcaC07g37762' => 'bca', 'BcaC07g38184' => 'bca', 'BcaC07g39263' => 'bca', 'BcaC08g43120' => 'bca', 'BcaC08g43867' => 'bca', 'BcaC08g44142' => 'bca', 'BcaC08g44172' => 'bca', 'BcaC08g44444' => 'bca', 'BcaC08g45228' => 'bca', 'BcaC08g46850' => 'bca', 'BcaC08g46978' => 'bca', 'BcaC08g46980' => 'bca', 'BcaC08g47005' => 'bca', 'BcaC09g48751' => 'bca', 'BcaC09g49024' => 'bca', 'BcaC09g49287' => 'bca', 'BcaC09g50083' => 'bca', 'BcaC09g51573' => 'bca', 'BcaC09g51594' => 'bca', 'BcaNung00229' => 'bca', 'BcaNung00284' => 'bca', 'BcaNung00468' => 'bca', 'BcaNung01360' => 'bca', 'BcaNung02282' => 'bca', 'BcaNung02449' => 'bca', 'BcaNung04782' => 'bca', 'BNapus_Darmor_BZH_scaffold_103p00080' => 'bna', 'BNapus_Darmor_BZH_scaffold_104p00080' => 'bna', 'BNapus_Darmor_BZH_scaffold_104p00090' => 'bna', 'BNapus_Darmor_BZH_scaffold_38p00010' => 'bna', 'BNapus_Darmor_BZH_scaffold_38p02600' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00150' => 'bna', 'BolC1t01121H' => 'bol', 'BolC1t01131H' => 'bol', 'BolC1t01148H' => 'bol', 'BolC1t01149H' => 'bol', 'BolC1t01902H' => 'bol', 'BolC1t02113H' => 'bol', 'BolC1t03990H' => 'bol', 'BolC1t04285H' => 'bol', 'BolC1t04589H' => 'bol', 'BolC1t05514H' => 'bol', 'BolC2t07185H' => 'bol', 'BolC2t07874H' => 'bol', 'BolC2t08169H' => 'bol', 'BolC2t09973H' => 'bol', 'BolC2t11143H' => 'bol', 'BolC2t11144H' => 'bol', 'BolC2t11145H' => 'bol', 'BolC2t11293H' => 'bol', 'BolC2t11347H' => 'bol', 'BolC3t14874H' => 'bol', 'BolC3t15494H' => 'bol', 'BolC3t15766H' => 'bol', 'BolC3t16968H' => 'bol', 'BolC3t16999H' => 'bol', 'BolC3t17485H' => 'bol', 'BolC3t18949H' => 'bol', 'BolC3t18950H' => 'bol', 'BolC3t19681H' => 'bol', 'BolC3t20321H' => 'bol', 'BolC3t20322H' => 'bol', 'BolC4t23574H' => 'bol', 'BolC4t23575H' => 'bol', 'BolC4t24024H' => 'bol', 'BolC4t25611H' => 'bol', 'BolC4t25613H' => 'bol', 'BolC4t26208H' => 'bol', 'BolC4t26248H' => 'bol', 'BolC4t27362H' => 'bol', 'BolC4t27749H' => 'bol', 'BolC5t30492H' => 'bol', 'BolC5t31711H' => 'bol', 'BolC5t31712H' => 'bol', 'BolC5t32344H' => 'bol', 'BolC5t32403H' => 'bol', 'BolC5t32608H' => 'bol', 'BolC5t33003H' => 'bol', 'BolC5t33633H' => 'bol', 'BolC5t33734H' => 'bol', 'BolC5t34489H' => 'bol', 'BolC6t36138H' => 'bol', 'BolC6t36405H' => 'bol', 'BolC6t36761H' => 'bol', 'BolC6t36762H' => 'bol', 'BolC6t37095H' => 'bol', 'BolC6t37789H' => 'bol', 'BolC6t37790H' => 'bol', 'BolC6t38914H' => 'bol', 'BolC6t38915H' => 'bol', 'BolC6t38916H' => 'bol', 'BolC7t40492H' => 'bol', 'BolC7t41164H' => 'bol', 'BolC7t41409H' => 'bol', 'BolC7t41410H' => 'bol', 'BolC7t41626H' => 'bol', 'BolC7t41648H' => 'bol', 'BolC7t41662H' => 'bol', 'BolC7t41684H' => 'bol', 'BolC7t41688H' => 'bol', 'BolC7t41839H' => 'bol', 'BolC7t41881H' => 'bol', 'BolC7t42043H' => 'bol', 'BolC7t42338H' => 'bol', 'BolC7t42339H' => 'bol', 'BolC7t42469H' => 'bol', 'BolC7t42716H' => 'bol', 'BolC7t43509H' => 'bol', 'BolC7t43636H' => 'bol', 'BolC7t44008H' => 'bol', 'BolC7t44009H' => 'bol', 'BolC7t44103H' => 'bol', 'BolC7t44104H' => 'bol', 'BolC7t44786H' => 'bol', 'BolC8t47295H' => 'bol', 'BolC8t47413H' => 'bol', 'BolC8t47777H' => 'bol', 'BolC8t48147H' => 'bol', 'BolC8t49550H' => 'bol', 'BolC9t54134H' => 'bol', 'BolC9t55139H' => 'bol', 'BolC9t55140H' => 'bol', 'BolC9t55517H' => 'bol', 'BolC9t55518H' => 'bol', 'BolC9t55839H' => 'bol', 'BolC9t56412H' => 'bol', 'BolC9t56621H' => 'bol', 'BolC9t56849H' => 'bol', 'BolC9t57089H' => 'bol', 'BolC9t57409H' => 'bol', 'BolC9t58082H' => 'bol', 'BolC9t58942H' => 'bol', 'BolC9t59718H' => 'bol', 'BolC9t59719H' => 'bol', 'BolC9t59720H' => 'bol', 'BraA01t02127Z' => 'bra', 'BraA01t02128Z' => 'bra', 'BraA01t02230Z' => 'bra', 'BraA01t02417Z' => 'bra', 'BraA01t02516Z' => 'bra', 'BraA01t02885Z' => 'bra', 'BraA02t06493Z' => 'bra', 'BraA02t06821Z' => 'bra', 'BraA02t07755Z' => 'bra', 'BraA02t08028Z' => 'bra', 'BraA02t08689Z' => 'bra', 'BraA02t08904Z' => 'bra', 'BraA02t08905Z' => 'bra', 'BraA02t08907Z' => 'bra', 'BraA03t11730Z' => 'bra', 'BraA03t12256Z' => 'bra', 'BraA03t13820Z' => 'bra', 'BraA03t13821Z' => 'bra', 'BraA04t16494Z' => 'bra', 'BraA04t16531Z' => 'bra', 'BraA04t16532Z' => 'bra', 'BraA04t16611Z' => 'bra', 'BraA04t16612Z' => 'bra', 'BraA04t16796Z' => 'bra', 'BraA04t16797Z' => 'bra', 'BraA04t16800Z' => 'bra', 'BraA04t17267Z' => 'bra', 'BraA04t17286Z' => 'bra', 'BraA04t18197Z' => 'bra', 'BraA04t18267Z' => 'bra', 'BraA05t19810Z' => 'bra', 'BraA05t20013Z' => 'bra', 'BraA05t20300Z' => 'bra', 'BraA05t20301Z' => 'bra', 'BraA05t20474Z' => 'bra', 'BraA05t21066Z' => 'bra', 'BraA05t21067Z' => 'bra', 'BraA05t21228Z' => 'bra', 'BraA05t21246Z' => 'bra', 'BraA05t21309Z' => 'bra', 'BraA05t21461Z' => 'bra', 'BraA05t21706Z' => 'bra', 'BraA05t22113Z' => 'bra', 'BraA06t24004Z' => 'bra', 'BraA06t24005Z' => 'bra', 'BraA06t24545Z' => 'bra', 'BraA06t24710Z' => 'bra', 'BraA06t25315Z' => 'bra', 'BraA06t25316Z' => 'bra', 'BraA06t25335Z' => 'bra', 'BraA06t25336Z' => 'bra', 'BraA06t25408Z' => 'bra', 'BraA06t25409Z' => 'bra', 'BraA06t25412Z' => 'bra', 'BraA06t25413Z' => 'bra', 'BraA06t25652Z' => 'bra', 'BraA06t25806Z' => 'bra', 'BraA07t28076Z' => 'bra', 'BraA07t28383Z' => 'bra', 'BraA07t28562Z' => 'bra', 'BraA07t28563Z' => 'bra', 'BraA07t28779Z' => 'bra', 'BraA07t28816Z' => 'bra', 'BraA07t28962Z' => 'bra', 'BraA07t29115Z' => 'bra', 'BraA08t32580Z' => 'bra', 'BraA08t32783Z' => 'bra', 'BraA08t32953Z' => 'bra', 'BraA08t34217Z' => 'bra', 'BraA08t34502Z' => 'bra', 'BraA09t36747Z' => 'bra', 'BraA09t41072Z' => 'bra', 'BraA10t43039Z' => 'bra', 'BraA10t43313Z' => 'bra', 'BraA10t43452Z' => 'bra', 'BraSC36t46061Z' => 'bra', 'BraSC36t46105Z' => 'bra', 'BraSC36t46106Z' => 'bra', 'BraSC37t46126Z' => 'bra', 'C01p11550' => 'bna', 'C01p11670' => 'bna', 'C01p21260' => 'bna', 'C01p21870' => 'bna', 'C01p40340' => 'bna', 'C01p42190' => 'bna', 'C01p43230' => 'bna', 'C01p43390' => 'bna', 'C01p46270' => 'bna', 'C02p24050' => 'bna', 'C02p30270' => 'bna', 'C02p30280' => 'bna', 'C02p31720' => 'bna', 'C02p39590' => 'bna', 'C02p45440' => 'bna', 'C02p45450' => 'bna', 'C02p52080' => 'bna', 'C03p31460' => 'bna', 'C03p31470' => 'bna', 'C03p34550' => 'bna', 'C03p47220' => 'bna', 'C03p52030' => 'bna', 'C03p52320' => 'bna', 'C03p66800' => 'bna', 'C03p66810' => 'bna', 'C03p66820' => 'bna', 'C03p74230' => 'bna', 'C03p74910' => 'bna', 'C04p20490' => 'bna', 'C04p20500' => 'bna', 'C04p40310' => 'bna', 'C04p40350' => 'bna', 'C04p42380' => 'bna', 'C04p46240' => 'bna', 'C04p57150' => 'bna', 'C04p58370' => 'bna', 'C04p58380' => 'bna', 'C05p12340' => 'bna', 'C05p34660' => 'bna', 'C05p34670' => 'bna', 'C05p36210' => 'bna', 'C05p36690' => 'bna', 'C05p37200' => 'bna', 'C05p37210' => 'bna', 'C05p38680' => 'bna', 'C05p40160' => 'bna', 'C05p42760' => 'bna', 'C05p48920' => 'bna', 'C05p48930' => 'bna', 'C06p00840' => 'bna', 'C06p00850' => 'bna', 'C06p00860' => 'bna', 'C06p03930' => 'bna', 'C06p06920' => 'bna', 'C06p10570' => 'bna', 'C06p12520' => 'bna', 'C06p18900' => 'bna', 'C06p26270' => 'bna', 'C06p26280' => 'bna', 'C06p38180' => 'bna', 'C07p07480' => 'bna', 'C07p09720' => 'bna', 'C07p11750' => 'bna', 'C07p11760' => 'bna', 'C07p11920' => 'bna', 'C07p12170' => 'bna', 'C07p12200' => 'bna', 'C07p12210' => 'bna', 'C07p13440' => 'bna', 'C07p15560' => 'bna', 'C07p18280' => 'bna', 'C07p18290' => 'bna', 'C07p19510' => 'bna', 'C07p21840' => 'bna', 'C07p21850' => 'bna', 'C07p30940' => 'bna', 'C07p34820' => 'bna', 'C07p35880' => 'bna', 'C07p42580' => 'bna', 'C07p60310' => 'bna', 'C08p05930' => 'bna', 'C08p05940' => 'bna', 'C08p05950' => 'bna', 'C08p09290' => 'bna', 'C08p17260' => 'bna', 'C08p22120' => 'bna', 'C08p22730' => 'bna', 'C08p27920' => 'bna', 'C09p12400' => 'bna', 'C09p12410' => 'bna', 'C09p20540' => 'bna', 'C09p22250' => 'bna', 'C09p26140' => 'bna', 'C09p26150' => 'bna', 'C09p35780' => 'bna', 'C09p36260' => 'bna', 'C09p37880' => 'bna', 'C09p39680' => 'bna', 'C09p39690' => 'bna', 'C09p42070' => 'bna', 'C09p45390' => 'bna', 'C09p50150' => 'bna', 'C09p52160' => 'bna', 'C09p60390' => 'bna', 'C09p68940' => 'bna', 'C09p68950' => 'bna', 'C09p69750' => 'bna', 'CARHR034500' => 'chi', 'CARHR034790' => 'chi', 'CARHR104490' => 'chi', 'CARHR120350' => 'chi', 'CARHR153260' => 'chi', 'CARHR182390' => 'chi', 'CARHR216710' => 'chi', 'Carub.0004s1123' => 'cru', 'Carub.0007s2445' => 'cru', 'Carub.0013s0014' => 'cru', 'Sp1g37020' => 'spa', 'Sp3g26840' => 'spa', 'Sp4g09680' => 'spa', 'Sp4g09840' => 'spa', 'Sp5g17750' => 'spa', 'Sp5g23310' => 'spa', 'Sp6g06510' => 'spa', 'Sp6g11090' => 'spa', 'SpUn0001_0050' => 'spa', 'Thhalv10000713m.g' => 'esa', 'Thhalv10001261m.g' => 'esa', 'Thhalv10002173m.g' => 'esa', 'Thhalv10002299m.g' => 'esa', 'Thhalv10002771m.g' => 'esa', 'Thhalv10002975m.g' => 'esa', 'Thhalv10003015m.g' => 'esa', 'Thhalv10003093m.g' => 'esa', 'Thhalv10003372m.g' => 'esa', 'Thhalv10003408m.g' => 'esa', 'Thhalv10009967m.g' => 'esa', 'Thhalv10010036m.g' => 'esa', 'Thhalv10011074m.g' => 'esa', 'Thhalv10012295m.g' => 'esa', 'Thhalv10015415m.g' => 'esa', 'Thhalv10015447m.g' => 'esa', 'Thhalv10015533m.g' => 'esa', 'Thhalv10015691m.g' => 'esa', 'Thhalv10022419m.g' => 'esa', 'Thhalv10023140m.g' => 'esa', 'Thhalv10023958m.g' => 'esa', 'Thhalv10023964m.g' => 'esa', 'Thhalv10023977m.g' => 'esa', 'Thhalv10029129m.g' => 'esa', 'Thhalv10029131m.g' => 'esa', 'Thhalv10029276m.g' => 'esa' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001038' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001038' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001038' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001038' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001038', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '10' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p01820' => 'bna', 'A01p23200' => 'bna', 'A01p24490' => 'bna', 'A01p25970' => 'bna', 'A01p38280' => 'bna', 'A02p12560' => 'bna', 'A02p12570' => 'bna', 'A02p22710' => 'bna', 'A02p26950' => 'bna', 'A02p27290' => 'bna', 'A02p37020' => 'bna', 'A03p30780' => 'bna', 'A03p31860' => 'bna', 'A03p51100' => 'bna', 'A03p68060' => 'bna', 'A04p08060' => 'bna', 'A04p08070' => 'bna', 'A04p08290' => 'bna', 'A04p08430' => 'bna', 'A04p11350' => 'bna', 'A04p11380' => 'bna', 'A04p16280' => 'bna', 'A04p22180' => 'bna', 'A05p13620' => 'bna', 'A05p15580' => 'bna', 'A05p21480' => 'bna', 'A05p23600' => 'bna', 'A05p25760' => 'bna', 'A05p28250' => 'bna', 'A06p10190' => 'bna', 'A06p16020' => 'bna', 'A06p18460' => 'bna', 'A06p22310' => 'bna', 'A06p23100' => 'bna', 'A06p26760' => 'bna', 'A06p26770' => 'bna', 'A06p28660' => 'bna', 'A06p36110' => 'bna', 'A07p05940' => 'bna', 'A07p07690' => 'bna', 'A07p07700' => 'bna', 'A07p11770' => 'bna', 'A07p30050' => 'bna', 'A07p31540' => 'bna', 'A09p28390' => 'bna', 'A09p34780' => 'bna', 'A09p36510' => 'bna', 'A09p58370' => 'bna', 'A09p58380' => 'bna', 'A09p58390' => 'bna', 'A10p07420' => 'bna', 'A10p07430' => 'bna', 'A10p08770' => 'bna', 'A10p12160' => 'bna', 'A10p12170' => 'bna', 'A10p17410' => 'bna', 'AL3G41000' => 'aly', 'AL3G41200' => 'aly', 'AL5G24460' => 'aly', 'AL6G43780' => 'aly', 'AL6G49460' => 'aly', 'AL8G20830' => 'aly', 'AT2G07240' => 'ath', 'BcaB01g00119' => 'bca', 'BcaB01g00832' => 'bca', 'BcaB01g01124' => 'bca', 'BcaB01g01205' => 'bca', 'BcaB01g01303' => 'bca', 'BcaB01g01349' => 'bca', 'BcaB01g01350' => 'bca', 'BcaB01g01530' => 'bca', 'BcaB01g01601' => 'bca', 'BcaB01g01614' => 'bca', 'BcaB01g01698' => 'bca', 'BcaB01g01699' => 'bca', 'BcaB01g01825' => 'bca', 'BcaB01g01915' => 'bca', 'BcaB01g02361' => 'bca', 'BcaB01g02362' => 'bca', 'BcaB01g02419' => 'bca', 'BcaB01g03119' => 'bca', 'BcaB01g04196' => 'bca', 'BcaB02g06555' => 'bca', 'BcaB02g07256' => 'bca', 'BcaB02g10677' => 'bca', 'BcaB02g10814' => 'bca', 'BcaB02g10826' => 'bca', 'BcaB02g10843' => 'bca', 'BcaB02g10939' => 'bca', 'BcaB02g11035' => 'bca', 'BcaB02g11159' => 'bca', 'BcaB03g12379' => 'bca', 'BcaB03g13655' => 'bca', 'BcaB03g14886' => 'bca', 'BcaB03g15871' => 'bca', 'BcaB03g16061' => 'bca', 'BcaB03g16260' => 'bca', 'BcaB03g16464' => 'bca', 'BcaB03g16578' => 'bca', 'BcaB03g16620' => 'bca', 'BcaB04g17277' => 'bca', 'BcaB04g17339' => 'bca', 'BcaB04g17690' => 'bca', 'BcaB04g17766' => 'bca', 'BcaB04g17932' => 'bca', 'BcaB04g18537' => 'bca', 'BcaB04g19295' => 'bca', 'BcaB04g19444' => 'bca', 'BcaB04g19629' => 'bca', 'BcaB05g21586' => 'bca', 'BcaB05g22095' => 'bca', 'BcaB05g22891' => 'bca', 'BcaB05g23462' => 'bca', 'BcaB05g23512' => 'bca', 'BcaB05g23513' => 'bca', 'BcaB05g23592' => 'bca', 'BcaB05g23859' => 'bca', 'BcaB05g24425' => 'bca', 'BcaB05g25087' => 'bca', 'BcaB06g25472' => 'bca', 'BcaB06g26021' => 'bca', 'BcaB06g26608' => 'bca', 'BcaB06g26720' => 'bca', 'BcaB06g26737' => 'bca', 'BcaB06g26967' => 'bca', 'BcaB06g26982' => 'bca', 'BcaB06g27083' => 'bca', 'BcaB06g27191' => 'bca', 'BcaB06g27482' => 'bca', 'BcaB06g27710' => 'bca', 'BcaB06g27965' => 'bca', 'BcaB06g28131' => 'bca', 'BcaB06g28161' => 'bca', 'BcaB06g28199' => 'bca', 'BcaB06g28541' => 'bca', 'BcaB06g28542' => 'bca', 'BcaB06g28671' => 'bca', 'BcaB07g30174' => 'bca', 'BcaB07g31162' => 'bca', 'BcaB07g31487' => 'bca', 'BcaB07g31666' => 'bca', 'BcaB07g31818' => 'bca', 'BcaB07g32041' => 'bca', 'BcaB07g32042' => 'bca', 'BcaB07g32226' => 'bca', 'BcaB07g32567' => 'bca', 'BcaB07g32736' => 'bca', 'BcaB07g32737' => 'bca', 'BcaB07g32821' => 'bca', 'BcaB07g33328' => 'bca', 'BcaB07g33632' => 'bca', 'BcaB08g34364' => 'bca', 'BcaB08g34565' => 'bca', 'BcaB08g34623' => 'bca', 'BcaB08g34624' => 'bca', 'BcaB08g34710' => 'bca', 'BcaB08g34782' => 'bca', 'BcaB08g34797' => 'bca', 'BcaB08g34843' => 'bca', 'BcaB08g35144' => 'bca', 'BcaB08g35415' => 'bca', 'BcaB08g35416' => 'bca', 'BcaB08g35558' => 'bca', 'BcaB08g36368' => 'bca', 'BcaB08g36369' => 'bca', 'BcaB08g36731' => 'bca', 'BcaB08g36820' => 'bca', 'BcaB08g36899' => 'bca', 'BcaC01g02304' => 'bca', 'BcaC01g03478' => 'bca', 'BcaC01g03622' => 'bca', 'BcaC01g03710' => 'bca', 'BcaC01g03929' => 'bca', 'BcaC01g04978' => 'bca', 'BcaC01g04979' => 'bca', 'BcaC01g04980' => 'bca', 'BcaC02g07854' => 'bca', 'BcaC02g08100' => 'bca', 'BcaC03g14544' => 'bca', 'BcaC03g15415' => 'bca', 'BcaC03g15830' => 'bca', 'BcaC03g16183' => 'bca', 'BcaC03g17929' => 'bca', 'BcaC04g19622' => 'bca', 'BcaC04g19884' => 'bca', 'BcaC04g20293' => 'bca', 'BcaC04g20563' => 'bca', 'BcaC04g20742' => 'bca', 'BcaC04g21093' => 'bca', 'BcaC04g21460' => 'bca', 'BcaC04g21625' => 'bca', 'BcaC04g22192' => 'bca', 'BcaC04g23074' => 'bca', 'BcaC05g24335' => 'bca', 'BcaC05g24336' => 'bca', 'BcaC05g25183' => 'bca', 'BcaC05g25823' => 'bca', 'BcaC05g26744' => 'bca', 'BcaC05g27501' => 'bca', 'BcaC05g27690' => 'bca', 'BcaC05g27733' => 'bca', 'BcaC05g27866' => 'bca', 'BcaC05g28246' => 'bca', 'BcaC05g28787' => 'bca', 'BcaC06g32026' => 'bca', 'BcaC06g32416' => 'bca', 'BcaC06g33611' => 'bca', 'BcaC06g33888' => 'bca', 'BcaC06g34271' => 'bca', 'BcaC06g34914' => 'bca', 'BcaC06g35484' => 'bca', 'BcaC06g35567' => 'bca', 'BcaC06g35568' => 'bca', 'BcaC06g35698' => 'bca', 'BcaC06g35713' => 'bca', 'BcaC06g35714' => 'bca', 'BcaC06g36746' => 'bca', 'BcaC07g36920' => 'bca', 'BcaC07g37457' => 'bca', 'BcaC07g37762' => 'bca', 'BcaC07g38184' => 'bca', 'BcaC07g39263' => 'bca', 'BcaC08g43120' => 'bca', 'BcaC08g43867' => 'bca', 'BcaC08g44142' => 'bca', 'BcaC08g44172' => 'bca', 'BcaC08g44444' => 'bca', 'BcaC08g45228' => 'bca', 'BcaC08g46850' => 'bca', 'BcaC08g46978' => 'bca', 'BcaC08g46980' => 'bca', 'BcaC08g47005' => 'bca', 'BcaC09g48751' => 'bca', 'BcaC09g49024' => 'bca', 'BcaC09g49287' => 'bca', 'BcaC09g50083' => 'bca', 'BcaC09g51573' => 'bca', 'BcaC09g51594' => 'bca', 'BcaNung00229' => 'bca', 'BcaNung00284' => 'bca', 'BcaNung00468' => 'bca', 'BcaNung01360' => 'bca', 'BcaNung02282' => 'bca', 'BcaNung02449' => 'bca', 'BcaNung04782' => 'bca', 'BNapus_Darmor_BZH_scaffold_103p00080' => 'bna', 'BNapus_Darmor_BZH_scaffold_104p00080' => 'bna', 'BNapus_Darmor_BZH_scaffold_104p00090' => 'bna', 'BNapus_Darmor_BZH_scaffold_38p00010' => 'bna', 'BNapus_Darmor_BZH_scaffold_38p02600' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00150' => 'bna', 'BolC1t01121H' => 'bol', 'BolC1t01131H' => 'bol', 'BolC1t01148H' => 'bol', 'BolC1t01149H' => 'bol', 'BolC1t01902H' => 'bol', 'BolC1t02113H' => 'bol', 'BolC1t03990H' => 'bol', 'BolC1t04285H' => 'bol', 'BolC1t04589H' => 'bol', 'BolC1t05514H' => 'bol', 'BolC2t07185H' => 'bol', 'BolC2t07874H' => 'bol', 'BolC2t08169H' => 'bol', 'BolC2t09973H' => 'bol', 'BolC2t11143H' => 'bol', 'BolC2t11144H' => 'bol', 'BolC2t11145H' => 'bol', 'BolC2t11293H' => 'bol', 'BolC2t11347H' => 'bol', 'BolC3t14874H' => 'bol', 'BolC3t15494H' => 'bol', 'BolC3t15766H' => 'bol', 'BolC3t16968H' => 'bol', 'BolC3t16999H' => 'bol', 'BolC3t17485H' => 'bol', 'BolC3t18949H' => 'bol', 'BolC3t18950H' => 'bol', 'BolC3t19681H' => 'bol', 'BolC3t20321H' => 'bol', 'BolC3t20322H' => 'bol', 'BolC4t23574H' => 'bol', 'BolC4t23575H' => 'bol', 'BolC4t24024H' => 'bol', 'BolC4t25611H' => 'bol', 'BolC4t25613H' => 'bol', 'BolC4t26208H' => 'bol', 'BolC4t26248H' => 'bol', 'BolC4t27362H' => 'bol', 'BolC4t27749H' => 'bol', 'BolC5t30492H' => 'bol', 'BolC5t31711H' => 'bol', 'BolC5t31712H' => 'bol', 'BolC5t32344H' => 'bol', 'BolC5t32403H' => 'bol', 'BolC5t32608H' => 'bol', 'BolC5t33003H' => 'bol', 'BolC5t33633H' => 'bol', 'BolC5t33734H' => 'bol', 'BolC5t34489H' => 'bol', 'BolC6t36138H' => 'bol', 'BolC6t36405H' => 'bol', 'BolC6t36761H' => 'bol', 'BolC6t36762H' => 'bol', 'BolC6t37095H' => 'bol', 'BolC6t37789H' => 'bol', 'BolC6t37790H' => 'bol', 'BolC6t38914H' => 'bol', 'BolC6t38915H' => 'bol', 'BolC6t38916H' => 'bol', 'BolC7t40492H' => 'bol', 'BolC7t41164H' => 'bol', 'BolC7t41409H' => 'bol', 'BolC7t41410H' => 'bol', 'BolC7t41626H' => 'bol', 'BolC7t41648H' => 'bol', 'BolC7t41662H' => 'bol', 'BolC7t41684H' => 'bol', 'BolC7t41688H' => 'bol', 'BolC7t41839H' => 'bol', 'BolC7t41881H' => 'bol', 'BolC7t42043H' => 'bol', 'BolC7t42338H' => 'bol', 'BolC7t42339H' => 'bol', 'BolC7t42469H' => 'bol', 'BolC7t42716H' => 'bol', 'BolC7t43509H' => 'bol', 'BolC7t43636H' => 'bol', 'BolC7t44008H' => 'bol', 'BolC7t44009H' => 'bol', 'BolC7t44103H' => 'bol', 'BolC7t44104H' => 'bol', 'BolC7t44786H' => 'bol', 'BolC8t47295H' => 'bol', 'BolC8t47413H' => 'bol', 'BolC8t47777H' => 'bol', 'BolC8t48147H' => 'bol', 'BolC8t49550H' => 'bol', 'BolC9t54134H' => 'bol', 'BolC9t55139H' => 'bol', 'BolC9t55140H' => 'bol', 'BolC9t55517H' => 'bol', 'BolC9t55518H' => 'bol', 'BolC9t55839H' => 'bol', 'BolC9t56412H' => 'bol', 'BolC9t56621H' => 'bol', 'BolC9t56849H' => 'bol', 'BolC9t57089H' => 'bol', 'BolC9t57409H' => 'bol', 'BolC9t58082H' => 'bol', 'BolC9t58942H' => 'bol', 'BolC9t59718H' => 'bol', 'BolC9t59719H' => 'bol', 'BolC9t59720H' => 'bol', 'BraA01t02127Z' => 'bra', 'BraA01t02128Z' => 'bra', 'BraA01t02230Z' => 'bra', 'BraA01t02417Z' => 'bra', 'BraA01t02516Z' => 'bra', 'BraA01t02885Z' => 'bra', 'BraA02t06493Z' => 'bra', 'BraA02t06821Z' => 'bra', 'BraA02t07755Z' => 'bra', 'BraA02t08028Z' => 'bra', 'BraA02t08689Z' => 'bra', 'BraA02t08904Z' => 'bra', 'BraA02t08905Z' => 'bra', 'BraA02t08907Z' => 'bra', 'BraA03t11730Z' => 'bra', 'BraA03t12256Z' => 'bra', 'BraA03t13820Z' => 'bra', 'BraA03t13821Z' => 'bra', 'BraA04t16494Z' => 'bra', 'BraA04t16531Z' => 'bra', 'BraA04t16532Z' => 'bra', 'BraA04t16611Z' => 'bra', 'BraA04t16612Z' => 'bra', 'BraA04t16796Z' => 'bra', 'BraA04t16797Z' => 'bra', 'BraA04t16800Z' => 'bra', 'BraA04t17267Z' => 'bra', 'BraA04t17286Z' => 'bra', 'BraA04t18197Z' => 'bra', 'BraA04t18267Z' => 'bra', 'BraA05t19810Z' => 'bra', 'BraA05t20013Z' => 'bra', 'BraA05t20300Z' => 'bra', 'BraA05t20301Z' => 'bra', 'BraA05t20474Z' => 'bra', 'BraA05t21066Z' => 'bra', 'BraA05t21067Z' => 'bra', 'BraA05t21228Z' => 'bra', 'BraA05t21246Z' => 'bra', 'BraA05t21309Z' => 'bra', 'BraA05t21461Z' => 'bra', 'BraA05t21706Z' => 'bra', 'BraA05t22113Z' => 'bra', 'BraA06t24004Z' => 'bra', 'BraA06t24005Z' => 'bra', 'BraA06t24545Z' => 'bra', 'BraA06t24710Z' => 'bra', 'BraA06t25315Z' => 'bra', 'BraA06t25316Z' => 'bra', 'BraA06t25335Z' => 'bra', 'BraA06t25336Z' => 'bra', 'BraA06t25408Z' => 'bra', 'BraA06t25409Z' => 'bra', 'BraA06t25412Z' => 'bra', 'BraA06t25413Z' => 'bra', 'BraA06t25652Z' => 'bra', 'BraA06t25806Z' => 'bra', 'BraA07t28076Z' => 'bra', 'BraA07t28383Z' => 'bra', 'BraA07t28562Z' => 'bra', 'BraA07t28563Z' => 'bra', 'BraA07t28779Z' => 'bra', 'BraA07t28816Z' => 'bra', 'BraA07t28962Z' => 'bra', 'BraA07t29115Z' => 'bra', 'BraA08t32580Z' => 'bra', 'BraA08t32783Z' => 'bra', 'BraA08t32953Z' => 'bra', 'BraA08t34217Z' => 'bra', 'BraA08t34502Z' => 'bra', 'BraA09t36747Z' => 'bra', 'BraA09t41072Z' => 'bra', 'BraA10t43039Z' => 'bra', 'BraA10t43313Z' => 'bra', 'BraA10t43452Z' => 'bra', 'BraSC36t46061Z' => 'bra', 'BraSC36t46105Z' => 'bra', 'BraSC36t46106Z' => 'bra', 'BraSC37t46126Z' => 'bra', 'C01p11550' => 'bna', 'C01p11670' => 'bna', 'C01p21260' => 'bna', 'C01p21870' => 'bna', 'C01p40340' => 'bna', 'C01p42190' => 'bna', 'C01p43230' => 'bna', 'C01p43390' => 'bna', 'C01p46270' => 'bna', 'C02p24050' => 'bna', 'C02p30270' => 'bna', 'C02p30280' => 'bna', 'C02p31720' => 'bna', 'C02p39590' => 'bna', 'C02p45440' => 'bna', 'C02p45450' => 'bna', 'C02p52080' => 'bna', 'C03p31460' => 'bna', 'C03p31470' => 'bna', 'C03p34550' => 'bna', 'C03p47220' => 'bna', 'C03p52030' => 'bna', 'C03p52320' => 'bna', 'C03p66800' => 'bna', 'C03p66810' => 'bna', 'C03p66820' => 'bna', 'C03p74230' => 'bna', 'C03p74910' => 'bna', 'C04p20490' => 'bna', 'C04p20500' => 'bna', 'C04p40310' => 'bna', 'C04p40350' => 'bna', 'C04p42380' => 'bna', 'C04p46240' => 'bna', 'C04p57150' => 'bna', 'C04p58370' => 'bna', 'C04p58380' => 'bna', 'C05p12340' => 'bna', 'C05p34660' => 'bna', 'C05p34670' => 'bna', 'C05p36210' => 'bna', 'C05p36690' => 'bna', 'C05p37200' => 'bna', 'C05p37210' => 'bna', 'C05p38680' => 'bna', 'C05p40160' => 'bna', 'C05p42760' => 'bna', 'C05p48920' => 'bna', 'C05p48930' => 'bna', 'C06p00840' => 'bna', 'C06p00850' => 'bna', 'C06p00860' => 'bna', 'C06p03930' => 'bna', 'C06p06920' => 'bna', 'C06p10570' => 'bna', 'C06p12520' => 'bna', 'C06p18900' => 'bna', 'C06p26270' => 'bna', 'C06p26280' => 'bna', 'C06p38180' => 'bna', 'C07p07480' => 'bna', 'C07p09720' => 'bna', 'C07p11750' => 'bna', 'C07p11760' => 'bna', 'C07p11920' => 'bna', 'C07p12170' => 'bna', 'C07p12200' => 'bna', 'C07p12210' => 'bna', 'C07p13440' => 'bna', 'C07p15560' => 'bna', 'C07p18280' => 'bna', 'C07p18290' => 'bna', 'C07p19510' => 'bna', 'C07p21840' => 'bna', 'C07p21850' => 'bna', 'C07p30940' => 'bna', 'C07p34820' => 'bna', 'C07p35880' => 'bna', 'C07p42580' => 'bna', 'C07p60310' => 'bna', 'C08p05930' => 'bna', 'C08p05940' => 'bna', 'C08p05950' => 'bna', 'C08p09290' => 'bna', 'C08p17260' => 'bna', 'C08p22120' => 'bna', 'C08p22730' => 'bna', 'C08p27920' => 'bna', 'C09p12400' => 'bna', 'C09p12410' => 'bna', 'C09p20540' => 'bna', 'C09p22250' => 'bna', 'C09p26140' => 'bna', 'C09p26150' => 'bna', 'C09p35780' => 'bna', 'C09p36260' => 'bna', 'C09p37880' => 'bna', 'C09p39680' => 'bna', 'C09p39690' => 'bna', 'C09p42070' => 'bna', 'C09p45390' => 'bna', 'C09p50150' => 'bna', 'C09p52160' => 'bna', 'C09p60390' => 'bna', 'C09p68940' => 'bna', 'C09p68950' => 'bna', 'C09p69750' => 'bna', 'CARHR034500' => 'chi', 'CARHR034790' => 'chi', 'CARHR104490' => 'chi', 'CARHR120350' => 'chi', 'CARHR153260' => 'chi', 'CARHR182390' => 'chi', 'CARHR216710' => 'chi', 'Carub.0004s1123' => 'cru', 'Carub.0007s2445' => 'cru', 'Carub.0013s0014' => 'cru', 'Sp1g37020' => 'spa', 'Sp3g26840' => 'spa', 'Sp4g09680' => 'spa', 'Sp4g09840' => 'spa', 'Sp5g17750' => 'spa', 'Sp5g23310' => 'spa', 'Sp6g06510' => 'spa', 'Sp6g11090' => 'spa', 'SpUn0001_0050' => 'spa', 'Thhalv10000713m.g' => 'esa', 'Thhalv10001261m.g' => 'esa', 'Thhalv10002173m.g' => 'esa', 'Thhalv10002299m.g' => 'esa', 'Thhalv10002771m.g' => 'esa', 'Thhalv10002975m.g' => 'esa', 'Thhalv10003015m.g' => 'esa', 'Thhalv10003093m.g' => 'esa', 'Thhalv10003372m.g' => 'esa', 'Thhalv10003408m.g' => 'esa', 'Thhalv10009967m.g' => 'esa', 'Thhalv10010036m.g' => 'esa', 'Thhalv10011074m.g' => 'esa', 'Thhalv10012295m.g' => 'esa', 'Thhalv10015415m.g' => 'esa', 'Thhalv10015447m.g' => 'esa', 'Thhalv10015533m.g' => 'esa', 'Thhalv10015691m.g' => 'esa', 'Thhalv10022419m.g' => 'esa', 'Thhalv10023140m.g' => 'esa', 'Thhalv10023958m.g' => 'esa', 'Thhalv10023964m.g' => 'esa', 'Thhalv10023977m.g' => 'esa', 'Thhalv10029129m.g' => 'esa', 'Thhalv10029131m.g' => 'esa', 'Thhalv10029276m.g' => 'esa' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001038', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001038' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001038', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '10' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001038' ) ), 'genes' => array( 'A01p01820' => 'bna', 'A01p23200' => 'bna', 'A01p24490' => 'bna', 'A01p25970' => 'bna', 'A01p38280' => 'bna', 'A02p12560' => 'bna', 'A02p12570' => 'bna', 'A02p22710' => 'bna', 'A02p26950' => 'bna', 'A02p27290' => 'bna', 'A02p37020' => 'bna', 'A03p30780' => 'bna', 'A03p31860' => 'bna', 'A03p51100' => 'bna', 'A03p68060' => 'bna', 'A04p08060' => 'bna', 'A04p08070' => 'bna', 'A04p08290' => 'bna', 'A04p08430' => 'bna', 'A04p11350' => 'bna', 'A04p11380' => 'bna', 'A04p16280' => 'bna', 'A04p22180' => 'bna', 'A05p13620' => 'bna', 'A05p15580' => 'bna', 'A05p21480' => 'bna', 'A05p23600' => 'bna', 'A05p25760' => 'bna', 'A05p28250' => 'bna', 'A06p10190' => 'bna', 'A06p16020' => 'bna', 'A06p18460' => 'bna', 'A06p22310' => 'bna', 'A06p23100' => 'bna', 'A06p26760' => 'bna', 'A06p26770' => 'bna', 'A06p28660' => 'bna', 'A06p36110' => 'bna', 'A07p05940' => 'bna', 'A07p07690' => 'bna', 'A07p07700' => 'bna', 'A07p11770' => 'bna', 'A07p30050' => 'bna', 'A07p31540' => 'bna', 'A09p28390' => 'bna', 'A09p34780' => 'bna', 'A09p36510' => 'bna', 'A09p58370' => 'bna', 'A09p58380' => 'bna', 'A09p58390' => 'bna', 'A10p07420' => 'bna', 'A10p07430' => 'bna', 'A10p08770' => 'bna', 'A10p12160' => 'bna', 'A10p12170' => 'bna', 'A10p17410' => 'bna', 'AL3G41000' => 'aly', 'AL3G41200' => 'aly', 'AL5G24460' => 'aly', 'AL6G43780' => 'aly', 'AL6G49460' => 'aly', 'AL8G20830' => 'aly', 'AT2G07240' => 'ath', 'BcaB01g00119' => 'bca', 'BcaB01g00832' => 'bca', 'BcaB01g01124' => 'bca', 'BcaB01g01205' => 'bca', 'BcaB01g01303' => 'bca', 'BcaB01g01349' => 'bca', 'BcaB01g01350' => 'bca', 'BcaB01g01530' => 'bca', 'BcaB01g01601' => 'bca', 'BcaB01g01614' => 'bca', 'BcaB01g01698' => 'bca', 'BcaB01g01699' => 'bca', 'BcaB01g01825' => 'bca', 'BcaB01g01915' => 'bca', 'BcaB01g02361' => 'bca', 'BcaB01g02362' => 'bca', 'BcaB01g02419' => 'bca', 'BcaB01g03119' => 'bca', 'BcaB01g04196' => 'bca', 'BcaB02g06555' => 'bca', 'BcaB02g07256' => 'bca', 'BcaB02g10677' => 'bca', 'BcaB02g10814' => 'bca', 'BcaB02g10826' => 'bca', 'BcaB02g10843' => 'bca', 'BcaB02g10939' => 'bca', 'BcaB02g11035' => 'bca', 'BcaB02g11159' => 'bca', 'BcaB03g12379' => 'bca', 'BcaB03g13655' => 'bca', 'BcaB03g14886' => 'bca', 'BcaB03g15871' => 'bca', 'BcaB03g16061' => 'bca', 'BcaB03g16260' => 'bca', 'BcaB03g16464' => 'bca', 'BcaB03g16578' => 'bca', 'BcaB03g16620' => 'bca', 'BcaB04g17277' => 'bca', 'BcaB04g17339' => 'bca', 'BcaB04g17690' => 'bca', 'BcaB04g17766' => 'bca', 'BcaB04g17932' => 'bca', 'BcaB04g18537' => 'bca', 'BcaB04g19295' => 'bca', 'BcaB04g19444' => 'bca', 'BcaB04g19629' => 'bca', 'BcaB05g21586' => 'bca', 'BcaB05g22095' => 'bca', 'BcaB05g22891' => 'bca', 'BcaB05g23462' => 'bca', 'BcaB05g23512' => 'bca', 'BcaB05g23513' => 'bca', 'BcaB05g23592' => 'bca', 'BcaB05g23859' => 'bca', 'BcaB05g24425' => 'bca', 'BcaB05g25087' => 'bca', 'BcaB06g25472' => 'bca', 'BcaB06g26021' => 'bca', 'BcaB06g26608' => 'bca', 'BcaB06g26720' => 'bca', 'BcaB06g26737' => 'bca', 'BcaB06g26967' => 'bca', 'BcaB06g26982' => 'bca', 'BcaB06g27083' => 'bca', 'BcaB06g27191' => 'bca', 'BcaB06g27482' => 'bca', 'BcaB06g27710' => 'bca', 'BcaB06g27965' => 'bca', 'BcaB06g28131' => 'bca', 'BcaB06g28161' => 'bca', 'BcaB06g28199' => 'bca', 'BcaB06g28541' => 'bca', 'BcaB06g28542' => 'bca', 'BcaB06g28671' => 'bca', 'BcaB07g30174' => 'bca', 'BcaB07g31162' => 'bca', 'BcaB07g31487' => 'bca', 'BcaB07g31666' => 'bca', 'BcaB07g31818' => 'bca', 'BcaB07g32041' => 'bca', 'BcaB07g32042' => 'bca', 'BcaB07g32226' => 'bca', 'BcaB07g32567' => 'bca', 'BcaB07g32736' => 'bca', 'BcaB07g32737' => 'bca', 'BcaB07g32821' => 'bca', 'BcaB07g33328' => 'bca', 'BcaB07g33632' => 'bca', 'BcaB08g34364' => 'bca', 'BcaB08g34565' => 'bca', 'BcaB08g34623' => 'bca', 'BcaB08g34624' => 'bca', 'BcaB08g34710' => 'bca', 'BcaB08g34782' => 'bca', 'BcaB08g34797' => 'bca', 'BcaB08g34843' => 'bca', 'BcaB08g35144' => 'bca', 'BcaB08g35415' => 'bca', 'BcaB08g35416' => 'bca', 'BcaB08g35558' => 'bca', 'BcaB08g36368' => 'bca', 'BcaB08g36369' => 'bca', 'BcaB08g36731' => 'bca', 'BcaB08g36820' => 'bca', 'BcaB08g36899' => 'bca', 'BcaC01g02304' => 'bca', 'BcaC01g03478' => 'bca', 'BcaC01g03622' => 'bca', 'BcaC01g03710' => 'bca', 'BcaC01g03929' => 'bca', 'BcaC01g04978' => 'bca', 'BcaC01g04979' => 'bca', 'BcaC01g04980' => 'bca', 'BcaC02g07854' => 'bca', 'BcaC02g08100' => 'bca', 'BcaC03g14544' => 'bca', 'BcaC03g15415' => 'bca', 'BcaC03g15830' => 'bca', 'BcaC03g16183' => 'bca', 'BcaC03g17929' => 'bca', 'BcaC04g19622' => 'bca', 'BcaC04g19884' => 'bca', 'BcaC04g20293' => 'bca', 'BcaC04g20563' => 'bca', 'BcaC04g20742' => 'bca', 'BcaC04g21093' => 'bca', 'BcaC04g21460' => 'bca', 'BcaC04g21625' => 'bca', 'BcaC04g22192' => 'bca', 'BcaC04g23074' => 'bca', 'BcaC05g24335' => 'bca', 'BcaC05g24336' => 'bca', 'BcaC05g25183' => 'bca', 'BcaC05g25823' => 'bca', 'BcaC05g26744' => 'bca', 'BcaC05g27501' => 'bca', 'BcaC05g27690' => 'bca', 'BcaC05g27733' => 'bca', 'BcaC05g27866' => 'bca', 'BcaC05g28246' => 'bca', 'BcaC05g28787' => 'bca', 'BcaC06g32026' => 'bca', 'BcaC06g32416' => 'bca', 'BcaC06g33611' => 'bca', 'BcaC06g33888' => 'bca', 'BcaC06g34271' => 'bca', 'BcaC06g34914' => 'bca', 'BcaC06g35484' => 'bca', 'BcaC06g35567' => 'bca', 'BcaC06g35568' => 'bca', 'BcaC06g35698' => 'bca', 'BcaC06g35713' => 'bca', 'BcaC06g35714' => 'bca', 'BcaC06g36746' => 'bca', 'BcaC07g36920' => 'bca', 'BcaC07g37457' => 'bca', 'BcaC07g37762' => 'bca', 'BcaC07g38184' => 'bca', 'BcaC07g39263' => 'bca', 'BcaC08g43120' => 'bca', 'BcaC08g43867' => 'bca', 'BcaC08g44142' => 'bca', 'BcaC08g44172' => 'bca', 'BcaC08g44444' => 'bca', 'BcaC08g45228' => 'bca', 'BcaC08g46850' => 'bca', 'BcaC08g46978' => 'bca', 'BcaC08g46980' => 'bca', 'BcaC08g47005' => 'bca', 'BcaC09g48751' => 'bca', 'BcaC09g49024' => 'bca', 'BcaC09g49287' => 'bca', 'BcaC09g50083' => 'bca', 'BcaC09g51573' => 'bca', 'BcaC09g51594' => 'bca', 'BcaNung00229' => 'bca', 'BcaNung00284' => 'bca', 'BcaNung00468' => 'bca', 'BcaNung01360' => 'bca', 'BcaNung02282' => 'bca', 'BcaNung02449' => 'bca', 'BcaNung04782' => 'bca', 'BNapus_Darmor_BZH_scaffold_103p00080' => 'bna', 'BNapus_Darmor_BZH_scaffold_104p00080' => 'bna', 'BNapus_Darmor_BZH_scaffold_104p00090' => 'bna', 'BNapus_Darmor_BZH_scaffold_38p00010' => 'bna', 'BNapus_Darmor_BZH_scaffold_38p02600' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00150' => 'bna', 'BolC1t01121H' => 'bol', 'BolC1t01131H' => 'bol', 'BolC1t01148H' => 'bol', 'BolC1t01149H' => 'bol', 'BolC1t01902H' => 'bol', 'BolC1t02113H' => 'bol', 'BolC1t03990H' => 'bol', 'BolC1t04285H' => 'bol', 'BolC1t04589H' => 'bol', 'BolC1t05514H' => 'bol', 'BolC2t07185H' => 'bol', 'BolC2t07874H' => 'bol', 'BolC2t08169H' => 'bol', 'BolC2t09973H' => 'bol', 'BolC2t11143H' => 'bol', 'BolC2t11144H' => 'bol', 'BolC2t11145H' => 'bol', 'BolC2t11293H' => 'bol', 'BolC2t11347H' => 'bol', 'BolC3t14874H' => 'bol', 'BolC3t15494H' => 'bol', 'BolC3t15766H' => 'bol', 'BolC3t16968H' => 'bol', 'BolC3t16999H' => 'bol', 'BolC3t17485H' => 'bol', 'BolC3t18949H' => 'bol', 'BolC3t18950H' => 'bol', 'BolC3t19681H' => 'bol', 'BolC3t20321H' => 'bol', 'BolC3t20322H' => 'bol', 'BolC4t23574H' => 'bol', 'BolC4t23575H' => 'bol', 'BolC4t24024H' => 'bol', 'BolC4t25611H' => 'bol', 'BolC4t25613H' => 'bol', 'BolC4t26208H' => 'bol', 'BolC4t26248H' => 'bol', 'BolC4t27362H' => 'bol', 'BolC4t27749H' => 'bol', 'BolC5t30492H' => 'bol', 'BolC5t31711H' => 'bol', 'BolC5t31712H' => 'bol', 'BolC5t32344H' => 'bol', 'BolC5t32403H' => 'bol', 'BolC5t32608H' => 'bol', 'BolC5t33003H' => 'bol', 'BolC5t33633H' => 'bol', 'BolC5t33734H' => 'bol', 'BolC5t34489H' => 'bol', 'BolC6t36138H' => 'bol', 'BolC6t36405H' => 'bol', 'BolC6t36761H' => 'bol', 'BolC6t36762H' => 'bol', 'BolC6t37095H' => 'bol', 'BolC6t37789H' => 'bol', 'BolC6t37790H' => 'bol', 'BolC6t38914H' => 'bol', 'BolC6t38915H' => 'bol', 'BolC6t38916H' => 'bol', 'BolC7t40492H' => 'bol', 'BolC7t41164H' => 'bol', 'BolC7t41409H' => 'bol', 'BolC7t41410H' => 'bol', 'BolC7t41626H' => 'bol', 'BolC7t41648H' => 'bol', 'BolC7t41662H' => 'bol', 'BolC7t41684H' => 'bol', 'BolC7t41688H' => 'bol', 'BolC7t41839H' => 'bol', 'BolC7t41881H' => 'bol', 'BolC7t42043H' => 'bol', 'BolC7t42338H' => 'bol', 'BolC7t42339H' => 'bol', 'BolC7t42469H' => 'bol', 'BolC7t42716H' => 'bol', 'BolC7t43509H' => 'bol', 'BolC7t43636H' => 'bol', 'BolC7t44008H' => 'bol', 'BolC7t44009H' => 'bol', 'BolC7t44103H' => 'bol', 'BolC7t44104H' => 'bol', 'BolC7t44786H' => 'bol', 'BolC8t47295H' => 'bol', 'BolC8t47413H' => 'bol', 'BolC8t47777H' => 'bol', 'BolC8t48147H' => 'bol', 'BolC8t49550H' => 'bol', 'BolC9t54134H' => 'bol', 'BolC9t55139H' => 'bol', 'BolC9t55140H' => 'bol', 'BolC9t55517H' => 'bol', 'BolC9t55518H' => 'bol', 'BolC9t55839H' => 'bol', 'BolC9t56412H' => 'bol', 'BolC9t56621H' => 'bol', 'BolC9t56849H' => 'bol', 'BolC9t57089H' => 'bol', 'BolC9t57409H' => 'bol', 'BolC9t58082H' => 'bol', 'BolC9t58942H' => 'bol', 'BolC9t59718H' => 'bol', 'BolC9t59719H' => 'bol', 'BolC9t59720H' => 'bol', 'BraA01t02127Z' => 'bra', 'BraA01t02128Z' => 'bra', 'BraA01t02230Z' => 'bra', 'BraA01t02417Z' => 'bra', 'BraA01t02516Z' => 'bra', 'BraA01t02885Z' => 'bra', 'BraA02t06493Z' => 'bra', 'BraA02t06821Z' => 'bra', 'BraA02t07755Z' => 'bra', 'BraA02t08028Z' => 'bra', 'BraA02t08689Z' => 'bra', 'BraA02t08904Z' => 'bra', 'BraA02t08905Z' => 'bra', 'BraA02t08907Z' => 'bra', 'BraA03t11730Z' => 'bra', 'BraA03t12256Z' => 'bra', 'BraA03t13820Z' => 'bra', 'BraA03t13821Z' => 'bra', 'BraA04t16494Z' => 'bra', 'BraA04t16531Z' => 'bra', 'BraA04t16532Z' => 'bra', 'BraA04t16611Z' => 'bra', 'BraA04t16612Z' => 'bra', 'BraA04t16796Z' => 'bra', 'BraA04t16797Z' => 'bra', 'BraA04t16800Z' => 'bra', 'BraA04t17267Z' => 'bra', 'BraA04t17286Z' => 'bra', 'BraA04t18197Z' => 'bra', 'BraA04t18267Z' => 'bra', 'BraA05t19810Z' => 'bra', 'BraA05t20013Z' => 'bra', 'BraA05t20300Z' => 'bra', 'BraA05t20301Z' => 'bra', 'BraA05t20474Z' => 'bra', 'BraA05t21066Z' => 'bra', 'BraA05t21067Z' => 'bra', 'BraA05t21228Z' => 'bra', 'BraA05t21246Z' => 'bra', 'BraA05t21309Z' => 'bra', 'BraA05t21461Z' => 'bra', 'BraA05t21706Z' => 'bra', 'BraA05t22113Z' => 'bra', 'BraA06t24004Z' => 'bra', 'BraA06t24005Z' => 'bra', 'BraA06t24545Z' => 'bra', 'BraA06t24710Z' => 'bra', 'BraA06t25315Z' => 'bra', 'BraA06t25316Z' => 'bra', 'BraA06t25335Z' => 'bra', 'BraA06t25336Z' => 'bra', 'BraA06t25408Z' => 'bra', 'BraA06t25409Z' => 'bra', 'BraA06t25412Z' => 'bra', 'BraA06t25413Z' => 'bra', 'BraA06t25652Z' => 'bra', 'BraA06t25806Z' => 'bra', 'BraA07t28076Z' => 'bra', 'BraA07t28383Z' => 'bra', 'BraA07t28562Z' => 'bra', 'BraA07t28563Z' => 'bra', 'BraA07t28779Z' => 'bra', 'BraA07t28816Z' => 'bra', 'BraA07t28962Z' => 'bra', 'BraA07t29115Z' => 'bra', 'BraA08t32580Z' => 'bra', 'BraA08t32783Z' => 'bra', 'BraA08t32953Z' => 'bra', 'BraA08t34217Z' => 'bra', 'BraA08t34502Z' => 'bra', 'BraA09t36747Z' => 'bra', 'BraA09t41072Z' => 'bra', 'BraA10t43039Z' => 'bra', 'BraA10t43313Z' => 'bra', 'BraA10t43452Z' => 'bra', 'BraSC36t46061Z' => 'bra', 'BraSC36t46105Z' => 'bra', 'BraSC36t46106Z' => 'bra', 'BraSC37t46126Z' => 'bra', 'C01p11550' => 'bna', 'C01p11670' => 'bna', 'C01p21260' => 'bna', 'C01p21870' => 'bna', 'C01p40340' => 'bna', 'C01p42190' => 'bna', 'C01p43230' => 'bna', 'C01p43390' => 'bna', 'C01p46270' => 'bna', 'C02p24050' => 'bna', 'C02p30270' => 'bna', 'C02p30280' => 'bna', 'C02p31720' => 'bna', 'C02p39590' => 'bna', 'C02p45440' => 'bna', 'C02p45450' => 'bna', 'C02p52080' => 'bna', 'C03p31460' => 'bna', 'C03p31470' => 'bna', 'C03p34550' => 'bna', 'C03p47220' => 'bna', 'C03p52030' => 'bna', 'C03p52320' => 'bna', 'C03p66800' => 'bna', 'C03p66810' => 'bna', 'C03p66820' => 'bna', 'C03p74230' => 'bna', 'C03p74910' => 'bna', 'C04p20490' => 'bna', 'C04p20500' => 'bna', 'C04p40310' => 'bna', 'C04p40350' => 'bna', 'C04p42380' => 'bna', 'C04p46240' => 'bna', 'C04p57150' => 'bna', 'C04p58370' => 'bna', 'C04p58380' => 'bna', 'C05p12340' => 'bna', 'C05p34660' => 'bna', 'C05p34670' => 'bna', 'C05p36210' => 'bna', 'C05p36690' => 'bna', 'C05p37200' => 'bna', 'C05p37210' => 'bna', 'C05p38680' => 'bna', 'C05p40160' => 'bna', 'C05p42760' => 'bna', 'C05p48920' => 'bna', 'C05p48930' => 'bna', 'C06p00840' => 'bna', 'C06p00850' => 'bna', 'C06p00860' => 'bna', 'C06p03930' => 'bna', 'C06p06920' => 'bna', 'C06p10570' => 'bna', 'C06p12520' => 'bna', 'C06p18900' => 'bna', 'C06p26270' => 'bna', 'C06p26280' => 'bna', 'C06p38180' => 'bna', 'C07p07480' => 'bna', 'C07p09720' => 'bna', 'C07p11750' => 'bna', 'C07p11760' => 'bna', 'C07p11920' => 'bna', 'C07p12170' => 'bna', 'C07p12200' => 'bna', 'C07p12210' => 'bna', 'C07p13440' => 'bna', 'C07p15560' => 'bna', 'C07p18280' => 'bna', 'C07p18290' => 'bna', 'C07p19510' => 'bna', 'C07p21840' => 'bna', 'C07p21850' => 'bna', 'C07p30940' => 'bna', 'C07p34820' => 'bna', 'C07p35880' => 'bna', 'C07p42580' => 'bna', 'C07p60310' => 'bna', 'C08p05930' => 'bna', 'C08p05940' => 'bna', 'C08p05950' => 'bna', 'C08p09290' => 'bna', 'C08p17260' => 'bna', 'C08p22120' => 'bna', 'C08p22730' => 'bna', 'C08p27920' => 'bna', 'C09p12400' => 'bna', 'C09p12410' => 'bna', 'C09p20540' => 'bna', 'C09p22250' => 'bna', 'C09p26140' => 'bna', 'C09p26150' => 'bna', 'C09p35780' => 'bna', 'C09p36260' => 'bna', 'C09p37880' => 'bna', 'C09p39680' => 'bna', 'C09p39690' => 'bna', 'C09p42070' => 'bna', 'C09p45390' => 'bna', 'C09p50150' => 'bna', 'C09p52160' => 'bna', 'C09p60390' => 'bna', 'C09p68940' => 'bna', 'C09p68950' => 'bna', 'C09p69750' => 'bna', 'CARHR034500' => 'chi', 'CARHR034790' => 'chi', 'CARHR104490' => 'chi', 'CARHR120350' => 'chi', 'CARHR153260' => 'chi', 'CARHR182390' => 'chi', 'CARHR216710' => 'chi', 'Carub.0004s1123' => 'cru', 'Carub.0007s2445' => 'cru', 'Carub.0013s0014' => 'cru', 'Sp1g37020' => 'spa', 'Sp3g26840' => 'spa', 'Sp4g09680' => 'spa', 'Sp4g09840' => 'spa', 'Sp5g17750' => 'spa', 'Sp5g23310' => 'spa', 'Sp6g06510' => 'spa', 'Sp6g11090' => 'spa', 'SpUn0001_0050' => 'spa', 'Thhalv10000713m.g' => 'esa', 'Thhalv10001261m.g' => 'esa', 'Thhalv10002173m.g' => 'esa', 'Thhalv10002299m.g' => 'esa', 'Thhalv10002771m.g' => 'esa', 'Thhalv10002975m.g' => 'esa', 'Thhalv10003015m.g' => 'esa', 'Thhalv10003093m.g' => 'esa', 'Thhalv10003372m.g' => 'esa', 'Thhalv10003408m.g' => 'esa', 'Thhalv10009967m.g' => 'esa', 'Thhalv10010036m.g' => 'esa', 'Thhalv10011074m.g' => 'esa', 'Thhalv10012295m.g' => 'esa', 'Thhalv10015415m.g' => 'esa', 'Thhalv10015447m.g' => 'esa', 'Thhalv10015533m.g' => 'esa', 'Thhalv10015691m.g' => 'esa', 'Thhalv10022419m.g' => 'esa', 'Thhalv10023140m.g' => 'esa', 'Thhalv10023958m.g' => 'esa', 'Thhalv10023964m.g' => 'esa', 'Thhalv10023977m.g' => 'esa', 'Thhalv10029129m.g' => 'esa', 'Thhalv10029131m.g' => 'esa', 'Thhalv10029276m.g' => 'esa' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001038' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001038' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001038' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001038' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001038', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '10' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p01820' => 'bna', 'A01p23200' => 'bna', 'A01p24490' => 'bna', 'A01p25970' => 'bna', 'A01p38280' => 'bna', 'A02p12560' => 'bna', 'A02p12570' => 'bna', 'A02p22710' => 'bna', 'A02p26950' => 'bna', 'A02p27290' => 'bna', 'A02p37020' => 'bna', 'A03p30780' => 'bna', 'A03p31860' => 'bna', 'A03p51100' => 'bna', 'A03p68060' => 'bna', 'A04p08060' => 'bna', 'A04p08070' => 'bna', 'A04p08290' => 'bna', 'A04p08430' => 'bna', 'A04p11350' => 'bna', 'A04p11380' => 'bna', 'A04p16280' => 'bna', 'A04p22180' => 'bna', 'A05p13620' => 'bna', 'A05p15580' => 'bna', 'A05p21480' => 'bna', 'A05p23600' => 'bna', 'A05p25760' => 'bna', 'A05p28250' => 'bna', 'A06p10190' => 'bna', 'A06p16020' => 'bna', 'A06p18460' => 'bna', 'A06p22310' => 'bna', 'A06p23100' => 'bna', 'A06p26760' => 'bna', 'A06p26770' => 'bna', 'A06p28660' => 'bna', 'A06p36110' => 'bna', 'A07p05940' => 'bna', 'A07p07690' => 'bna', 'A07p07700' => 'bna', 'A07p11770' => 'bna', 'A07p30050' => 'bna', 'A07p31540' => 'bna', 'A09p28390' => 'bna', 'A09p34780' => 'bna', 'A09p36510' => 'bna', 'A09p58370' => 'bna', 'A09p58380' => 'bna', 'A09p58390' => 'bna', 'A10p07420' => 'bna', 'A10p07430' => 'bna', 'A10p08770' => 'bna', 'A10p12160' => 'bna', 'A10p12170' => 'bna', 'A10p17410' => 'bna', 'AL3G41000' => 'aly', 'AL3G41200' => 'aly', 'AL5G24460' => 'aly', 'AL6G43780' => 'aly', 'AL6G49460' => 'aly', 'AL8G20830' => 'aly', 'AT2G07240' => 'ath', 'BcaB01g00119' => 'bca', 'BcaB01g00832' => 'bca', 'BcaB01g01124' => 'bca', 'BcaB01g01205' => 'bca', 'BcaB01g01303' => 'bca', 'BcaB01g01349' => 'bca', 'BcaB01g01350' => 'bca', 'BcaB01g01530' => 'bca', 'BcaB01g01601' => 'bca', 'BcaB01g01614' => 'bca', 'BcaB01g01698' => 'bca', 'BcaB01g01699' => 'bca', 'BcaB01g01825' => 'bca', 'BcaB01g01915' => 'bca', 'BcaB01g02361' => 'bca', 'BcaB01g02362' => 'bca', 'BcaB01g02419' => 'bca', 'BcaB01g03119' => 'bca', 'BcaB01g04196' => 'bca', 'BcaB02g06555' => 'bca', 'BcaB02g07256' => 'bca', 'BcaB02g10677' => 'bca', 'BcaB02g10814' => 'bca', 'BcaB02g10826' => 'bca', 'BcaB02g10843' => 'bca', 'BcaB02g10939' => 'bca', 'BcaB02g11035' => 'bca', 'BcaB02g11159' => 'bca', 'BcaB03g12379' => 'bca', 'BcaB03g13655' => 'bca', 'BcaB03g14886' => 'bca', 'BcaB03g15871' => 'bca', 'BcaB03g16061' => 'bca', 'BcaB03g16260' => 'bca', 'BcaB03g16464' => 'bca', 'BcaB03g16578' => 'bca', 'BcaB03g16620' => 'bca', 'BcaB04g17277' => 'bca', 'BcaB04g17339' => 'bca', 'BcaB04g17690' => 'bca', 'BcaB04g17766' => 'bca', 'BcaB04g17932' => 'bca', 'BcaB04g18537' => 'bca', 'BcaB04g19295' => 'bca', 'BcaB04g19444' => 'bca', 'BcaB04g19629' => 'bca', 'BcaB05g21586' => 'bca', 'BcaB05g22095' => 'bca', 'BcaB05g22891' => 'bca', 'BcaB05g23462' => 'bca', 'BcaB05g23512' => 'bca', 'BcaB05g23513' => 'bca', 'BcaB05g23592' => 'bca', 'BcaB05g23859' => 'bca', 'BcaB05g24425' => 'bca', 'BcaB05g25087' => 'bca', 'BcaB06g25472' => 'bca', 'BcaB06g26021' => 'bca', 'BcaB06g26608' => 'bca', 'BcaB06g26720' => 'bca', 'BcaB06g26737' => 'bca', 'BcaB06g26967' => 'bca', 'BcaB06g26982' => 'bca', 'BcaB06g27083' => 'bca', 'BcaB06g27191' => 'bca', 'BcaB06g27482' => 'bca', 'BcaB06g27710' => 'bca', 'BcaB06g27965' => 'bca', 'BcaB06g28131' => 'bca', 'BcaB06g28161' => 'bca', 'BcaB06g28199' => 'bca', 'BcaB06g28541' => 'bca', 'BcaB06g28542' => 'bca', 'BcaB06g28671' => 'bca', 'BcaB07g30174' => 'bca', 'BcaB07g31162' => 'bca', 'BcaB07g31487' => 'bca', 'BcaB07g31666' => 'bca', 'BcaB07g31818' => 'bca', 'BcaB07g32041' => 'bca', 'BcaB07g32042' => 'bca', 'BcaB07g32226' => 'bca', 'BcaB07g32567' => 'bca', 'BcaB07g32736' => 'bca', 'BcaB07g32737' => 'bca', 'BcaB07g32821' => 'bca', 'BcaB07g33328' => 'bca', 'BcaB07g33632' => 'bca', 'BcaB08g34364' => 'bca', 'BcaB08g34565' => 'bca', 'BcaB08g34623' => 'bca', 'BcaB08g34624' => 'bca', 'BcaB08g34710' => 'bca', 'BcaB08g34782' => 'bca', 'BcaB08g34797' => 'bca', 'BcaB08g34843' => 'bca', 'BcaB08g35144' => 'bca', 'BcaB08g35415' => 'bca', 'BcaB08g35416' => 'bca', 'BcaB08g35558' => 'bca', 'BcaB08g36368' => 'bca', 'BcaB08g36369' => 'bca', 'BcaB08g36731' => 'bca', 'BcaB08g36820' => 'bca', 'BcaB08g36899' => 'bca', 'BcaC01g02304' => 'bca', 'BcaC01g03478' => 'bca', 'BcaC01g03622' => 'bca', 'BcaC01g03710' => 'bca', 'BcaC01g03929' => 'bca', 'BcaC01g04978' => 'bca', 'BcaC01g04979' => 'bca', 'BcaC01g04980' => 'bca', 'BcaC02g07854' => 'bca', 'BcaC02g08100' => 'bca', 'BcaC03g14544' => 'bca', 'BcaC03g15415' => 'bca', 'BcaC03g15830' => 'bca', 'BcaC03g16183' => 'bca', 'BcaC03g17929' => 'bca', 'BcaC04g19622' => 'bca', 'BcaC04g19884' => 'bca', 'BcaC04g20293' => 'bca', 'BcaC04g20563' => 'bca', 'BcaC04g20742' => 'bca', 'BcaC04g21093' => 'bca', 'BcaC04g21460' => 'bca', 'BcaC04g21625' => 'bca', 'BcaC04g22192' => 'bca', 'BcaC04g23074' => 'bca', 'BcaC05g24335' => 'bca', 'BcaC05g24336' => 'bca', 'BcaC05g25183' => 'bca', 'BcaC05g25823' => 'bca', 'BcaC05g26744' => 'bca', 'BcaC05g27501' => 'bca', 'BcaC05g27690' => 'bca', 'BcaC05g27733' => 'bca', 'BcaC05g27866' => 'bca', 'BcaC05g28246' => 'bca', 'BcaC05g28787' => 'bca', 'BcaC06g32026' => 'bca', 'BcaC06g32416' => 'bca', 'BcaC06g33611' => 'bca', 'BcaC06g33888' => 'bca', 'BcaC06g34271' => 'bca', 'BcaC06g34914' => 'bca', 'BcaC06g35484' => 'bca', 'BcaC06g35567' => 'bca', 'BcaC06g35568' => 'bca', 'BcaC06g35698' => 'bca', 'BcaC06g35713' => 'bca', 'BcaC06g35714' => 'bca', 'BcaC06g36746' => 'bca', 'BcaC07g36920' => 'bca', 'BcaC07g37457' => 'bca', 'BcaC07g37762' => 'bca', 'BcaC07g38184' => 'bca', 'BcaC07g39263' => 'bca', 'BcaC08g43120' => 'bca', 'BcaC08g43867' => 'bca', 'BcaC08g44142' => 'bca', 'BcaC08g44172' => 'bca', 'BcaC08g44444' => 'bca', 'BcaC08g45228' => 'bca', 'BcaC08g46850' => 'bca', 'BcaC08g46978' => 'bca', 'BcaC08g46980' => 'bca', 'BcaC08g47005' => 'bca', 'BcaC09g48751' => 'bca', 'BcaC09g49024' => 'bca', 'BcaC09g49287' => 'bca', 'BcaC09g50083' => 'bca', 'BcaC09g51573' => 'bca', 'BcaC09g51594' => 'bca', 'BcaNung00229' => 'bca', 'BcaNung00284' => 'bca', 'BcaNung00468' => 'bca', 'BcaNung01360' => 'bca', 'BcaNung02282' => 'bca', 'BcaNung02449' => 'bca', 'BcaNung04782' => 'bca', 'BNapus_Darmor_BZH_scaffold_103p00080' => 'bna', 'BNapus_Darmor_BZH_scaffold_104p00080' => 'bna', 'BNapus_Darmor_BZH_scaffold_104p00090' => 'bna', 'BNapus_Darmor_BZH_scaffold_38p00010' => 'bna', 'BNapus_Darmor_BZH_scaffold_38p02600' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00150' => 'bna', 'BolC1t01121H' => 'bol', 'BolC1t01131H' => 'bol', 'BolC1t01148H' => 'bol', 'BolC1t01149H' => 'bol', 'BolC1t01902H' => 'bol', 'BolC1t02113H' => 'bol', 'BolC1t03990H' => 'bol', 'BolC1t04285H' => 'bol', 'BolC1t04589H' => 'bol', 'BolC1t05514H' => 'bol', 'BolC2t07185H' => 'bol', 'BolC2t07874H' => 'bol', 'BolC2t08169H' => 'bol', 'BolC2t09973H' => 'bol', 'BolC2t11143H' => 'bol', 'BolC2t11144H' => 'bol', 'BolC2t11145H' => 'bol', 'BolC2t11293H' => 'bol', 'BolC2t11347H' => 'bol', 'BolC3t14874H' => 'bol', 'BolC3t15494H' => 'bol', 'BolC3t15766H' => 'bol', 'BolC3t16968H' => 'bol', 'BolC3t16999H' => 'bol', 'BolC3t17485H' => 'bol', 'BolC3t18949H' => 'bol', 'BolC3t18950H' => 'bol', 'BolC3t19681H' => 'bol', 'BolC3t20321H' => 'bol', 'BolC3t20322H' => 'bol', 'BolC4t23574H' => 'bol', 'BolC4t23575H' => 'bol', 'BolC4t24024H' => 'bol', 'BolC4t25611H' => 'bol', 'BolC4t25613H' => 'bol', 'BolC4t26208H' => 'bol', 'BolC4t26248H' => 'bol', 'BolC4t27362H' => 'bol', 'BolC4t27749H' => 'bol', 'BolC5t30492H' => 'bol', 'BolC5t31711H' => 'bol', 'BolC5t31712H' => 'bol', 'BolC5t32344H' => 'bol', 'BolC5t32403H' => 'bol', 'BolC5t32608H' => 'bol', 'BolC5t33003H' => 'bol', 'BolC5t33633H' => 'bol', 'BolC5t33734H' => 'bol', 'BolC5t34489H' => 'bol', 'BolC6t36138H' => 'bol', 'BolC6t36405H' => 'bol', 'BolC6t36761H' => 'bol', 'BolC6t36762H' => 'bol', 'BolC6t37095H' => 'bol', 'BolC6t37789H' => 'bol', 'BolC6t37790H' => 'bol', 'BolC6t38914H' => 'bol', 'BolC6t38915H' => 'bol', 'BolC6t38916H' => 'bol', 'BolC7t40492H' => 'bol', 'BolC7t41164H' => 'bol', 'BolC7t41409H' => 'bol', 'BolC7t41410H' => 'bol', 'BolC7t41626H' => 'bol', 'BolC7t41648H' => 'bol', 'BolC7t41662H' => 'bol', 'BolC7t41684H' => 'bol', 'BolC7t41688H' => 'bol', 'BolC7t41839H' => 'bol', 'BolC7t41881H' => 'bol', 'BolC7t42043H' => 'bol', 'BolC7t42338H' => 'bol', 'BolC7t42339H' => 'bol', 'BolC7t42469H' => 'bol', 'BolC7t42716H' => 'bol', 'BolC7t43509H' => 'bol', 'BolC7t43636H' => 'bol', 'BolC7t44008H' => 'bol', 'BolC7t44009H' => 'bol', 'BolC7t44103H' => 'bol', 'BolC7t44104H' => 'bol', 'BolC7t44786H' => 'bol', 'BolC8t47295H' => 'bol', 'BolC8t47413H' => 'bol', 'BolC8t47777H' => 'bol', 'BolC8t48147H' => 'bol', 'BolC8t49550H' => 'bol', 'BolC9t54134H' => 'bol', 'BolC9t55139H' => 'bol', 'BolC9t55140H' => 'bol', 'BolC9t55517H' => 'bol', 'BolC9t55518H' => 'bol', 'BolC9t55839H' => 'bol', 'BolC9t56412H' => 'bol', 'BolC9t56621H' => 'bol', 'BolC9t56849H' => 'bol', 'BolC9t57089H' => 'bol', 'BolC9t57409H' => 'bol', 'BolC9t58082H' => 'bol', 'BolC9t58942H' => 'bol', 'BolC9t59718H' => 'bol', 'BolC9t59719H' => 'bol', 'BolC9t59720H' => 'bol', 'BraA01t02127Z' => 'bra', 'BraA01t02128Z' => 'bra', 'BraA01t02230Z' => 'bra', 'BraA01t02417Z' => 'bra', 'BraA01t02516Z' => 'bra', 'BraA01t02885Z' => 'bra', 'BraA02t06493Z' => 'bra', 'BraA02t06821Z' => 'bra', 'BraA02t07755Z' => 'bra', 'BraA02t08028Z' => 'bra', 'BraA02t08689Z' => 'bra', 'BraA02t08904Z' => 'bra', 'BraA02t08905Z' => 'bra', 'BraA02t08907Z' => 'bra', 'BraA03t11730Z' => 'bra', 'BraA03t12256Z' => 'bra', 'BraA03t13820Z' => 'bra', 'BraA03t13821Z' => 'bra', 'BraA04t16494Z' => 'bra', 'BraA04t16531Z' => 'bra', 'BraA04t16532Z' => 'bra', 'BraA04t16611Z' => 'bra', 'BraA04t16612Z' => 'bra', 'BraA04t16796Z' => 'bra', 'BraA04t16797Z' => 'bra', 'BraA04t16800Z' => 'bra', 'BraA04t17267Z' => 'bra', 'BraA04t17286Z' => 'bra', 'BraA04t18197Z' => 'bra', 'BraA04t18267Z' => 'bra', 'BraA05t19810Z' => 'bra', 'BraA05t20013Z' => 'bra', 'BraA05t20300Z' => 'bra', 'BraA05t20301Z' => 'bra', 'BraA05t20474Z' => 'bra', 'BraA05t21066Z' => 'bra', 'BraA05t21067Z' => 'bra', 'BraA05t21228Z' => 'bra', 'BraA05t21246Z' => 'bra', 'BraA05t21309Z' => 'bra', 'BraA05t21461Z' => 'bra', 'BraA05t21706Z' => 'bra', 'BraA05t22113Z' => 'bra', 'BraA06t24004Z' => 'bra', 'BraA06t24005Z' => 'bra', 'BraA06t24545Z' => 'bra', 'BraA06t24710Z' => 'bra', 'BraA06t25315Z' => 'bra', 'BraA06t25316Z' => 'bra', 'BraA06t25335Z' => 'bra', 'BraA06t25336Z' => 'bra', 'BraA06t25408Z' => 'bra', 'BraA06t25409Z' => 'bra', 'BraA06t25412Z' => 'bra', 'BraA06t25413Z' => 'bra', 'BraA06t25652Z' => 'bra', 'BraA06t25806Z' => 'bra', 'BraA07t28076Z' => 'bra', 'BraA07t28383Z' => 'bra', 'BraA07t28562Z' => 'bra', 'BraA07t28563Z' => 'bra', 'BraA07t28779Z' => 'bra', 'BraA07t28816Z' => 'bra', 'BraA07t28962Z' => 'bra', 'BraA07t29115Z' => 'bra', 'BraA08t32580Z' => 'bra', 'BraA08t32783Z' => 'bra', 'BraA08t32953Z' => 'bra', 'BraA08t34217Z' => 'bra', 'BraA08t34502Z' => 'bra', 'BraA09t36747Z' => 'bra', 'BraA09t41072Z' => 'bra', 'BraA10t43039Z' => 'bra', 'BraA10t43313Z' => 'bra', 'BraA10t43452Z' => 'bra', 'BraSC36t46061Z' => 'bra', 'BraSC36t46105Z' => 'bra', 'BraSC36t46106Z' => 'bra', 'BraSC37t46126Z' => 'bra', 'C01p11550' => 'bna', 'C01p11670' => 'bna', 'C01p21260' => 'bna', 'C01p21870' => 'bna', 'C01p40340' => 'bna', 'C01p42190' => 'bna', 'C01p43230' => 'bna', 'C01p43390' => 'bna', 'C01p46270' => 'bna', 'C02p24050' => 'bna', 'C02p30270' => 'bna', 'C02p30280' => 'bna', 'C02p31720' => 'bna', 'C02p39590' => 'bna', 'C02p45440' => 'bna', 'C02p45450' => 'bna', 'C02p52080' => 'bna', 'C03p31460' => 'bna', 'C03p31470' => 'bna', 'C03p34550' => 'bna', 'C03p47220' => 'bna', 'C03p52030' => 'bna', 'C03p52320' => 'bna', 'C03p66800' => 'bna', 'C03p66810' => 'bna', 'C03p66820' => 'bna', 'C03p74230' => 'bna', 'C03p74910' => 'bna', 'C04p20490' => 'bna', 'C04p20500' => 'bna', 'C04p40310' => 'bna', 'C04p40350' => 'bna', 'C04p42380' => 'bna', 'C04p46240' => 'bna', 'C04p57150' => 'bna', 'C04p58370' => 'bna', 'C04p58380' => 'bna', 'C05p12340' => 'bna', 'C05p34660' => 'bna', 'C05p34670' => 'bna', 'C05p36210' => 'bna', 'C05p36690' => 'bna', 'C05p37200' => 'bna', 'C05p37210' => 'bna', 'C05p38680' => 'bna', 'C05p40160' => 'bna', 'C05p42760' => 'bna', 'C05p48920' => 'bna', 'C05p48930' => 'bna', 'C06p00840' => 'bna', 'C06p00850' => 'bna', 'C06p00860' => 'bna', 'C06p03930' => 'bna', 'C06p06920' => 'bna', 'C06p10570' => 'bna', 'C06p12520' => 'bna', 'C06p18900' => 'bna', 'C06p26270' => 'bna', 'C06p26280' => 'bna', 'C06p38180' => 'bna', 'C07p07480' => 'bna', 'C07p09720' => 'bna', 'C07p11750' => 'bna', 'C07p11760' => 'bna', 'C07p11920' => 'bna', 'C07p12170' => 'bna', 'C07p12200' => 'bna', 'C07p12210' => 'bna', 'C07p13440' => 'bna', 'C07p15560' => 'bna', 'C07p18280' => 'bna', 'C07p18290' => 'bna', 'C07p19510' => 'bna', 'C07p21840' => 'bna', 'C07p21850' => 'bna', 'C07p30940' => 'bna', 'C07p34820' => 'bna', 'C07p35880' => 'bna', 'C07p42580' => 'bna', 'C07p60310' => 'bna', 'C08p05930' => 'bna', 'C08p05940' => 'bna', 'C08p05950' => 'bna', 'C08p09290' => 'bna', 'C08p17260' => 'bna', 'C08p22120' => 'bna', 'C08p22730' => 'bna', 'C08p27920' => 'bna', 'C09p12400' => 'bna', 'C09p12410' => 'bna', 'C09p20540' => 'bna', 'C09p22250' => 'bna', 'C09p26140' => 'bna', 'C09p26150' => 'bna', 'C09p35780' => 'bna', 'C09p36260' => 'bna', 'C09p37880' => 'bna', 'C09p39680' => 'bna', 'C09p39690' => 'bna', 'C09p42070' => 'bna', 'C09p45390' => 'bna', 'C09p50150' => 'bna', 'C09p52160' => 'bna', 'C09p60390' => 'bna', 'C09p68940' => 'bna', 'C09p68950' => 'bna', 'C09p69750' => 'bna', 'CARHR034500' => 'chi', 'CARHR034790' => 'chi', 'CARHR104490' => 'chi', 'CARHR120350' => 'chi', 'CARHR153260' => 'chi', 'CARHR182390' => 'chi', 'CARHR216710' => 'chi', 'Carub.0004s1123' => 'cru', 'Carub.0007s2445' => 'cru', 'Carub.0013s0014' => 'cru', 'Sp1g37020' => 'spa', 'Sp3g26840' => 'spa', 'Sp4g09680' => 'spa', 'Sp4g09840' => 'spa', 'Sp5g17750' => 'spa', 'Sp5g23310' => 'spa', 'Sp6g06510' => 'spa', 'Sp6g11090' => 'spa', 'SpUn0001_0050' => 'spa', 'Thhalv10000713m.g' => 'esa', 'Thhalv10001261m.g' => 'esa', 'Thhalv10002173m.g' => 'esa', 'Thhalv10002299m.g' => 'esa', 'Thhalv10002771m.g' => 'esa', 'Thhalv10002975m.g' => 'esa', 'Thhalv10003015m.g' => 'esa', 'Thhalv10003093m.g' => 'esa', 'Thhalv10003372m.g' => 'esa', 'Thhalv10003408m.g' => 'esa', 'Thhalv10009967m.g' => 'esa', 'Thhalv10010036m.g' => 'esa', 'Thhalv10011074m.g' => 'esa', 'Thhalv10012295m.g' => 'esa', 'Thhalv10015415m.g' => 'esa', 'Thhalv10015447m.g' => 'esa', 'Thhalv10015533m.g' => 'esa', 'Thhalv10015691m.g' => 'esa', 'Thhalv10022419m.g' => 'esa', 'Thhalv10023140m.g' => 'esa', 'Thhalv10023958m.g' => 'esa', 'Thhalv10023964m.g' => 'esa', 'Thhalv10023977m.g' => 'esa', 'Thhalv10029129m.g' => 'esa', 'Thhalv10029131m.g' => 'esa', 'Thhalv10029276m.g' => 'esa' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001038', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001038' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001038', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '10' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001038' ) ), 'genes' => array( 'A01p01820' => 'bna', 'A01p23200' => 'bna', 'A01p24490' => 'bna', 'A01p25970' => 'bna', 'A01p38280' => 'bna', 'A02p12560' => 'bna', 'A02p12570' => 'bna', 'A02p22710' => 'bna', 'A02p26950' => 'bna', 'A02p27290' => 'bna', 'A02p37020' => 'bna', 'A03p30780' => 'bna', 'A03p31860' => 'bna', 'A03p51100' => 'bna', 'A03p68060' => 'bna', 'A04p08060' => 'bna', 'A04p08070' => 'bna', 'A04p08290' => 'bna', 'A04p08430' => 'bna', 'A04p11350' => 'bna', 'A04p11380' => 'bna', 'A04p16280' => 'bna', 'A04p22180' => 'bna', 'A05p13620' => 'bna', 'A05p15580' => 'bna', 'A05p21480' => 'bna', 'A05p23600' => 'bna', 'A05p25760' => 'bna', 'A05p28250' => 'bna', 'A06p10190' => 'bna', 'A06p16020' => 'bna', 'A06p18460' => 'bna', 'A06p22310' => 'bna', 'A06p23100' => 'bna', 'A06p26760' => 'bna', 'A06p26770' => 'bna', 'A06p28660' => 'bna', 'A06p36110' => 'bna', 'A07p05940' => 'bna', 'A07p07690' => 'bna', 'A07p07700' => 'bna', 'A07p11770' => 'bna', 'A07p30050' => 'bna', 'A07p31540' => 'bna', 'A09p28390' => 'bna', 'A09p34780' => 'bna', 'A09p36510' => 'bna', 'A09p58370' => 'bna', 'A09p58380' => 'bna', 'A09p58390' => 'bna', 'A10p07420' => 'bna', 'A10p07430' => 'bna', 'A10p08770' => 'bna', 'A10p12160' => 'bna', 'A10p12170' => 'bna', 'A10p17410' => 'bna', 'AL3G41000' => 'aly', 'AL3G41200' => 'aly', 'AL5G24460' => 'aly', 'AL6G43780' => 'aly', 'AL6G49460' => 'aly', 'AL8G20830' => 'aly', 'AT2G07240' => 'ath', 'BcaB01g00119' => 'bca', 'BcaB01g00832' => 'bca', 'BcaB01g01124' => 'bca', 'BcaB01g01205' => 'bca', 'BcaB01g01303' => 'bca', 'BcaB01g01349' => 'bca', 'BcaB01g01350' => 'bca', 'BcaB01g01530' => 'bca', 'BcaB01g01601' => 'bca', 'BcaB01g01614' => 'bca', 'BcaB01g01698' => 'bca', 'BcaB01g01699' => 'bca', 'BcaB01g01825' => 'bca', 'BcaB01g01915' => 'bca', 'BcaB01g02361' => 'bca', 'BcaB01g02362' => 'bca', 'BcaB01g02419' => 'bca', 'BcaB01g03119' => 'bca', 'BcaB01g04196' => 'bca', 'BcaB02g06555' => 'bca', 'BcaB02g07256' => 'bca', 'BcaB02g10677' => 'bca', 'BcaB02g10814' => 'bca', 'BcaB02g10826' => 'bca', 'BcaB02g10843' => 'bca', 'BcaB02g10939' => 'bca', 'BcaB02g11035' => 'bca', 'BcaB02g11159' => 'bca', 'BcaB03g12379' => 'bca', 'BcaB03g13655' => 'bca', 'BcaB03g14886' => 'bca', 'BcaB03g15871' => 'bca', 'BcaB03g16061' => 'bca', 'BcaB03g16260' => 'bca', 'BcaB03g16464' => 'bca', 'BcaB03g16578' => 'bca', 'BcaB03g16620' => 'bca', 'BcaB04g17277' => 'bca', 'BcaB04g17339' => 'bca', 'BcaB04g17690' => 'bca', 'BcaB04g17766' => 'bca', 'BcaB04g17932' => 'bca', 'BcaB04g18537' => 'bca', 'BcaB04g19295' => 'bca', 'BcaB04g19444' => 'bca', 'BcaB04g19629' => 'bca', 'BcaB05g21586' => 'bca', 'BcaB05g22095' => 'bca', 'BcaB05g22891' => 'bca', 'BcaB05g23462' => 'bca', 'BcaB05g23512' => 'bca', 'BcaB05g23513' => 'bca', 'BcaB05g23592' => 'bca', 'BcaB05g23859' => 'bca', 'BcaB05g24425' => 'bca', 'BcaB05g25087' => 'bca', 'BcaB06g25472' => 'bca', 'BcaB06g26021' => 'bca', 'BcaB06g26608' => 'bca', 'BcaB06g26720' => 'bca', 'BcaB06g26737' => 'bca', 'BcaB06g26967' => 'bca', 'BcaB06g26982' => 'bca', 'BcaB06g27083' => 'bca', 'BcaB06g27191' => 'bca', 'BcaB06g27482' => 'bca', 'BcaB06g27710' => 'bca', 'BcaB06g27965' => 'bca', 'BcaB06g28131' => 'bca', 'BcaB06g28161' => 'bca', 'BcaB06g28199' => 'bca', 'BcaB06g28541' => 'bca', 'BcaB06g28542' => 'bca', 'BcaB06g28671' => 'bca', 'BcaB07g30174' => 'bca', 'BcaB07g31162' => 'bca', 'BcaB07g31487' => 'bca', 'BcaB07g31666' => 'bca', 'BcaB07g31818' => 'bca', 'BcaB07g32041' => 'bca', 'BcaB07g32042' => 'bca', 'BcaB07g32226' => 'bca', 'BcaB07g32567' => 'bca', 'BcaB07g32736' => 'bca', 'BcaB07g32737' => 'bca', 'BcaB07g32821' => 'bca', 'BcaB07g33328' => 'bca', 'BcaB07g33632' => 'bca', 'BcaB08g34364' => 'bca', 'BcaB08g34565' => 'bca', 'BcaB08g34623' => 'bca', 'BcaB08g34624' => 'bca', 'BcaB08g34710' => 'bca', 'BcaB08g34782' => 'bca', 'BcaB08g34797' => 'bca', 'BcaB08g34843' => 'bca', 'BcaB08g35144' => 'bca', 'BcaB08g35415' => 'bca', 'BcaB08g35416' => 'bca', 'BcaB08g35558' => 'bca', 'BcaB08g36368' => 'bca', 'BcaB08g36369' => 'bca', 'BcaB08g36731' => 'bca', 'BcaB08g36820' => 'bca', 'BcaB08g36899' => 'bca', 'BcaC01g02304' => 'bca', 'BcaC01g03478' => 'bca', 'BcaC01g03622' => 'bca', 'BcaC01g03710' => 'bca', 'BcaC01g03929' => 'bca', 'BcaC01g04978' => 'bca', 'BcaC01g04979' => 'bca', 'BcaC01g04980' => 'bca', 'BcaC02g07854' => 'bca', 'BcaC02g08100' => 'bca', 'BcaC03g14544' => 'bca', 'BcaC03g15415' => 'bca', 'BcaC03g15830' => 'bca', 'BcaC03g16183' => 'bca', 'BcaC03g17929' => 'bca', 'BcaC04g19622' => 'bca', 'BcaC04g19884' => 'bca', 'BcaC04g20293' => 'bca', 'BcaC04g20563' => 'bca', 'BcaC04g20742' => 'bca', 'BcaC04g21093' => 'bca', 'BcaC04g21460' => 'bca', 'BcaC04g21625' => 'bca', 'BcaC04g22192' => 'bca', 'BcaC04g23074' => 'bca', 'BcaC05g24335' => 'bca', 'BcaC05g24336' => 'bca', 'BcaC05g25183' => 'bca', 'BcaC05g25823' => 'bca', 'BcaC05g26744' => 'bca', 'BcaC05g27501' => 'bca', 'BcaC05g27690' => 'bca', 'BcaC05g27733' => 'bca', 'BcaC05g27866' => 'bca', 'BcaC05g28246' => 'bca', 'BcaC05g28787' => 'bca', 'BcaC06g32026' => 'bca', 'BcaC06g32416' => 'bca', 'BcaC06g33611' => 'bca', 'BcaC06g33888' => 'bca', 'BcaC06g34271' => 'bca', 'BcaC06g34914' => 'bca', 'BcaC06g35484' => 'bca', 'BcaC06g35567' => 'bca', 'BcaC06g35568' => 'bca', 'BcaC06g35698' => 'bca', 'BcaC06g35713' => 'bca', 'BcaC06g35714' => 'bca', 'BcaC06g36746' => 'bca', 'BcaC07g36920' => 'bca', 'BcaC07g37457' => 'bca', 'BcaC07g37762' => 'bca', 'BcaC07g38184' => 'bca', 'BcaC07g39263' => 'bca', 'BcaC08g43120' => 'bca', 'BcaC08g43867' => 'bca', 'BcaC08g44142' => 'bca', 'BcaC08g44172' => 'bca', 'BcaC08g44444' => 'bca', 'BcaC08g45228' => 'bca', 'BcaC08g46850' => 'bca', 'BcaC08g46978' => 'bca', 'BcaC08g46980' => 'bca', 'BcaC08g47005' => 'bca', 'BcaC09g48751' => 'bca', 'BcaC09g49024' => 'bca', 'BcaC09g49287' => 'bca', 'BcaC09g50083' => 'bca', 'BcaC09g51573' => 'bca', 'BcaC09g51594' => 'bca', 'BcaNung00229' => 'bca', 'BcaNung00284' => 'bca', 'BcaNung00468' => 'bca', 'BcaNung01360' => 'bca', 'BcaNung02282' => 'bca', 'BcaNung02449' => 'bca', 'BcaNung04782' => 'bca', 'BNapus_Darmor_BZH_scaffold_103p00080' => 'bna', 'BNapus_Darmor_BZH_scaffold_104p00080' => 'bna', 'BNapus_Darmor_BZH_scaffold_104p00090' => 'bna', 'BNapus_Darmor_BZH_scaffold_38p00010' => 'bna', 'BNapus_Darmor_BZH_scaffold_38p02600' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00150' => 'bna', 'BolC1t01121H' => 'bol', 'BolC1t01131H' => 'bol', 'BolC1t01148H' => 'bol', 'BolC1t01149H' => 'bol', 'BolC1t01902H' => 'bol', 'BolC1t02113H' => 'bol', 'BolC1t03990H' => 'bol', 'BolC1t04285H' => 'bol', 'BolC1t04589H' => 'bol', 'BolC1t05514H' => 'bol', 'BolC2t07185H' => 'bol', 'BolC2t07874H' => 'bol', 'BolC2t08169H' => 'bol', 'BolC2t09973H' => 'bol', 'BolC2t11143H' => 'bol', 'BolC2t11144H' => 'bol', 'BolC2t11145H' => 'bol', 'BolC2t11293H' => 'bol', 'BolC2t11347H' => 'bol', 'BolC3t14874H' => 'bol', 'BolC3t15494H' => 'bol', 'BolC3t15766H' => 'bol', 'BolC3t16968H' => 'bol', 'BolC3t16999H' => 'bol', 'BolC3t17485H' => 'bol', 'BolC3t18949H' => 'bol', 'BolC3t18950H' => 'bol', 'BolC3t19681H' => 'bol', 'BolC3t20321H' => 'bol', 'BolC3t20322H' => 'bol', 'BolC4t23574H' => 'bol', 'BolC4t23575H' => 'bol', 'BolC4t24024H' => 'bol', 'BolC4t25611H' => 'bol', 'BolC4t25613H' => 'bol', 'BolC4t26208H' => 'bol', 'BolC4t26248H' => 'bol', 'BolC4t27362H' => 'bol', 'BolC4t27749H' => 'bol', 'BolC5t30492H' => 'bol', 'BolC5t31711H' => 'bol', 'BolC5t31712H' => 'bol', 'BolC5t32344H' => 'bol', 'BolC5t32403H' => 'bol', 'BolC5t32608H' => 'bol', 'BolC5t33003H' => 'bol', 'BolC5t33633H' => 'bol', 'BolC5t33734H' => 'bol', 'BolC5t34489H' => 'bol', 'BolC6t36138H' => 'bol', 'BolC6t36405H' => 'bol', 'BolC6t36761H' => 'bol', 'BolC6t36762H' => 'bol', 'BolC6t37095H' => 'bol', 'BolC6t37789H' => 'bol', 'BolC6t37790H' => 'bol', 'BolC6t38914H' => 'bol', 'BolC6t38915H' => 'bol', 'BolC6t38916H' => 'bol', 'BolC7t40492H' => 'bol', 'BolC7t41164H' => 'bol', 'BolC7t41409H' => 'bol', 'BolC7t41410H' => 'bol', 'BolC7t41626H' => 'bol', 'BolC7t41648H' => 'bol', 'BolC7t41662H' => 'bol', 'BolC7t41684H' => 'bol', 'BolC7t41688H' => 'bol', 'BolC7t41839H' => 'bol', 'BolC7t41881H' => 'bol', 'BolC7t42043H' => 'bol', 'BolC7t42338H' => 'bol', 'BolC7t42339H' => 'bol', 'BolC7t42469H' => 'bol', 'BolC7t42716H' => 'bol', 'BolC7t43509H' => 'bol', 'BolC7t43636H' => 'bol', 'BolC7t44008H' => 'bol', 'BolC7t44009H' => 'bol', 'BolC7t44103H' => 'bol', 'BolC7t44104H' => 'bol', 'BolC7t44786H' => 'bol', 'BolC8t47295H' => 'bol', 'BolC8t47413H' => 'bol', 'BolC8t47777H' => 'bol', 'BolC8t48147H' => 'bol', 'BolC8t49550H' => 'bol', 'BolC9t54134H' => 'bol', 'BolC9t55139H' => 'bol', 'BolC9t55140H' => 'bol', 'BolC9t55517H' => 'bol', 'BolC9t55518H' => 'bol', 'BolC9t55839H' => 'bol', 'BolC9t56412H' => 'bol', 'BolC9t56621H' => 'bol', 'BolC9t56849H' => 'bol', 'BolC9t57089H' => 'bol', 'BolC9t57409H' => 'bol', 'BolC9t58082H' => 'bol', 'BolC9t58942H' => 'bol', 'BolC9t59718H' => 'bol', 'BolC9t59719H' => 'bol', 'BolC9t59720H' => 'bol', 'BraA01t02127Z' => 'bra', 'BraA01t02128Z' => 'bra', 'BraA01t02230Z' => 'bra', 'BraA01t02417Z' => 'bra', 'BraA01t02516Z' => 'bra', 'BraA01t02885Z' => 'bra', 'BraA02t06493Z' => 'bra', 'BraA02t06821Z' => 'bra', 'BraA02t07755Z' => 'bra', 'BraA02t08028Z' => 'bra', 'BraA02t08689Z' => 'bra', 'BraA02t08904Z' => 'bra', 'BraA02t08905Z' => 'bra', 'BraA02t08907Z' => 'bra', 'BraA03t11730Z' => 'bra', 'BraA03t12256Z' => 'bra', 'BraA03t13820Z' => 'bra', 'BraA03t13821Z' => 'bra', 'BraA04t16494Z' => 'bra', 'BraA04t16531Z' => 'bra', 'BraA04t16532Z' => 'bra', 'BraA04t16611Z' => 'bra', 'BraA04t16612Z' => 'bra', 'BraA04t16796Z' => 'bra', 'BraA04t16797Z' => 'bra', 'BraA04t16800Z' => 'bra', 'BraA04t17267Z' => 'bra', 'BraA04t17286Z' => 'bra', 'BraA04t18197Z' => 'bra', 'BraA04t18267Z' => 'bra', 'BraA05t19810Z' => 'bra', 'BraA05t20013Z' => 'bra', 'BraA05t20300Z' => 'bra', 'BraA05t20301Z' => 'bra', 'BraA05t20474Z' => 'bra', 'BraA05t21066Z' => 'bra', 'BraA05t21067Z' => 'bra', 'BraA05t21228Z' => 'bra', 'BraA05t21246Z' => 'bra', 'BraA05t21309Z' => 'bra', 'BraA05t21461Z' => 'bra', 'BraA05t21706Z' => 'bra', 'BraA05t22113Z' => 'bra', 'BraA06t24004Z' => 'bra', 'BraA06t24005Z' => 'bra', 'BraA06t24545Z' => 'bra', 'BraA06t24710Z' => 'bra', 'BraA06t25315Z' => 'bra', 'BraA06t25316Z' => 'bra', 'BraA06t25335Z' => 'bra', 'BraA06t25336Z' => 'bra', 'BraA06t25408Z' => 'bra', 'BraA06t25409Z' => 'bra', 'BraA06t25412Z' => 'bra', 'BraA06t25413Z' => 'bra', 'BraA06t25652Z' => 'bra', 'BraA06t25806Z' => 'bra', 'BraA07t28076Z' => 'bra', 'BraA07t28383Z' => 'bra', 'BraA07t28562Z' => 'bra', 'BraA07t28563Z' => 'bra', 'BraA07t28779Z' => 'bra', 'BraA07t28816Z' => 'bra', 'BraA07t28962Z' => 'bra', 'BraA07t29115Z' => 'bra', 'BraA08t32580Z' => 'bra', 'BraA08t32783Z' => 'bra', 'BraA08t32953Z' => 'bra', 'BraA08t34217Z' => 'bra', 'BraA08t34502Z' => 'bra', 'BraA09t36747Z' => 'bra', 'BraA09t41072Z' => 'bra', 'BraA10t43039Z' => 'bra', 'BraA10t43313Z' => 'bra', 'BraA10t43452Z' => 'bra', 'BraSC36t46061Z' => 'bra', 'BraSC36t46105Z' => 'bra', 'BraSC36t46106Z' => 'bra', 'BraSC37t46126Z' => 'bra', 'C01p11550' => 'bna', 'C01p11670' => 'bna', 'C01p21260' => 'bna', 'C01p21870' => 'bna', 'C01p40340' => 'bna', 'C01p42190' => 'bna', 'C01p43230' => 'bna', 'C01p43390' => 'bna', 'C01p46270' => 'bna', 'C02p24050' => 'bna', 'C02p30270' => 'bna', 'C02p30280' => 'bna', 'C02p31720' => 'bna', 'C02p39590' => 'bna', 'C02p45440' => 'bna', 'C02p45450' => 'bna', 'C02p52080' => 'bna', 'C03p31460' => 'bna', 'C03p31470' => 'bna', 'C03p34550' => 'bna', 'C03p47220' => 'bna', 'C03p52030' => 'bna', 'C03p52320' => 'bna', 'C03p66800' => 'bna', 'C03p66810' => 'bna', 'C03p66820' => 'bna', 'C03p74230' => 'bna', 'C03p74910' => 'bna', 'C04p20490' => 'bna', 'C04p20500' => 'bna', 'C04p40310' => 'bna', 'C04p40350' => 'bna', 'C04p42380' => 'bna', 'C04p46240' => 'bna', 'C04p57150' => 'bna', 'C04p58370' => 'bna', 'C04p58380' => 'bna', 'C05p12340' => 'bna', 'C05p34660' => 'bna', 'C05p34670' => 'bna', 'C05p36210' => 'bna', 'C05p36690' => 'bna', 'C05p37200' => 'bna', 'C05p37210' => 'bna', 'C05p38680' => 'bna', 'C05p40160' => 'bna', 'C05p42760' => 'bna', 'C05p48920' => 'bna', 'C05p48930' => 'bna', 'C06p00840' => 'bna', 'C06p00850' => 'bna', 'C06p00860' => 'bna', 'C06p03930' => 'bna', 'C06p06920' => 'bna', 'C06p10570' => 'bna', 'C06p12520' => 'bna', 'C06p18900' => 'bna', 'C06p26270' => 'bna', 'C06p26280' => 'bna', 'C06p38180' => 'bna', 'C07p07480' => 'bna', 'C07p09720' => 'bna', 'C07p11750' => 'bna', 'C07p11760' => 'bna', 'C07p11920' => 'bna', 'C07p12170' => 'bna', 'C07p12200' => 'bna', 'C07p12210' => 'bna', 'C07p13440' => 'bna', 'C07p15560' => 'bna', 'C07p18280' => 'bna', 'C07p18290' => 'bna', 'C07p19510' => 'bna', 'C07p21840' => 'bna', 'C07p21850' => 'bna', 'C07p30940' => 'bna', 'C07p34820' => 'bna', 'C07p35880' => 'bna', 'C07p42580' => 'bna', 'C07p60310' => 'bna', 'C08p05930' => 'bna', 'C08p05940' => 'bna', 'C08p05950' => 'bna', 'C08p09290' => 'bna', 'C08p17260' => 'bna', 'C08p22120' => 'bna', 'C08p22730' => 'bna', 'C08p27920' => 'bna', 'C09p12400' => 'bna', 'C09p12410' => 'bna', 'C09p20540' => 'bna', 'C09p22250' => 'bna', 'C09p26140' => 'bna', 'C09p26150' => 'bna', 'C09p35780' => 'bna', 'C09p36260' => 'bna', 'C09p37880' => 'bna', 'C09p39680' => 'bna', 'C09p39690' => 'bna', 'C09p42070' => 'bna', 'C09p45390' => 'bna', 'C09p50150' => 'bna', 'C09p52160' => 'bna', 'C09p60390' => 'bna', 'C09p68940' => 'bna', 'C09p68950' => 'bna', 'C09p69750' => 'bna', 'CARHR034500' => 'chi', 'CARHR034790' => 'chi', 'CARHR104490' => 'chi', 'CARHR120350' => 'chi', 'CARHR153260' => 'chi', 'CARHR182390' => 'chi', 'CARHR216710' => 'chi', 'Carub.0004s1123' => 'cru', 'Carub.0007s2445' => 'cru', 'Carub.0013s0014' => 'cru', 'Sp1g37020' => 'spa', 'Sp3g26840' => 'spa', 'Sp4g09680' => 'spa', 'Sp4g09840' => 'spa', 'Sp5g17750' => 'spa', 'Sp5g23310' => 'spa', 'Sp6g06510' => 'spa', 'Sp6g11090' => 'spa', 'SpUn0001_0050' => 'spa', 'Thhalv10000713m.g' => 'esa', 'Thhalv10001261m.g' => 'esa', 'Thhalv10002173m.g' => 'esa', 'Thhalv10002299m.g' => 'esa', 'Thhalv10002771m.g' => 'esa', 'Thhalv10002975m.g' => 'esa', 'Thhalv10003015m.g' => 'esa', 'Thhalv10003093m.g' => 'esa', 'Thhalv10003372m.g' => 'esa', 'Thhalv10003408m.g' => 'esa', 'Thhalv10009967m.g' => 'esa', 'Thhalv10010036m.g' => 'esa', 'Thhalv10011074m.g' => 'esa', 'Thhalv10012295m.g' => 'esa', 'Thhalv10015415m.g' => 'esa', 'Thhalv10015447m.g' => 'esa', 'Thhalv10015533m.g' => 'esa', 'Thhalv10015691m.g' => 'esa', 'Thhalv10022419m.g' => 'esa', 'Thhalv10023140m.g' => 'esa', 'Thhalv10023958m.g' => 'esa', 'Thhalv10023964m.g' => 'esa', 'Thhalv10023977m.g' => 'esa', 'Thhalv10029129m.g' => 'esa', 'Thhalv10029131m.g' => 'esa', 'Thhalv10029276m.g' => 'esa' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001038' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001038' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001038' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001038' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151