Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p16620 Brassica napus HOM05D000162 ORTHO05D003288 2.9e-81 307.0 331 100.0
A09p13890 Brassica napus HOM05D000162 ORTHO05D003288 2.3e-46 191.0 125 80.0
AL2G12380 Arabidopsis lyrata HOM05D000162 ORTHO05D003288 2.9e-17 94.4 143 42.7
Thhalv10023351m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 1.6e-15 88.6 139 38.1
Thhalv10023354m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 6.1e-15 86.7 121 41.3
Thhalv10023350m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 1.0e-14 85.9 135 40.7
Thhalv10023942m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 1.4e-14 85.5 124 41.1
AL2G12830 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 5.1e-14 83.6 124 41.1
Thhalv10023989m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 6.7e-14 83.2 120 40.0
CARHR050170 Cardamine hirsuta HOM05D015660 ORTHO05D000090 8.8e-14 82.8 88 52.3
Thhalv10023349m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 1.1e-13 82.4 133 36.8
Thhalv10023976m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 4.3e-13 80.5 117 40.2
AL2G13170 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 1.3e-12 79.0 126 40.5
Thhalv10023345m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 2.8e-12 77.8 73 58.9
Thhalv10023987m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 4.8e-12 77.0 147 34.7
AT1G62670 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 1.1e-11 75.9 125 37.6
AL2G12810 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 1.4e-11 75.5 131 37.4
Thhalv10023344m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 1.4e-11 75.5 125 36.8
AL2G13280 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 1.8e-11 75.1 127 38.6
BcaC04g22700 Brassica carinata HOM05D000162 ORTHO05D000090 1.8e-11 75.1 138 34.8
C09p16270 Brassica napus HOM05D000162 ORTHO05D000090 1.8e-11 75.1 138 34.8
BolC9t54537H Brassica oleracea HOM05D000162 ORTHO05D000090 1.8e-11 75.1 138 34.8
CARHR048500 Cardamine hirsuta HOM05D000162 ORTHO05D000090 1.8e-11 75.1 145 37.2
AL2G11830 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 2.4e-11 74.7 127 37.8
BraA09t37036Z Brassica rapa HOM05D000162 ORTHO05D003288 3.1e-11 74.3 92 44.6
AT1G62590 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 4.1e-11 73.9 129 37.2
Carub.0002s0148 Capsella rubella HOM05D000162 ORTHO05D003288 9.1e-11 72.8 126 35.7
AT1G63400 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 1.2e-10 72.4 79 53.2
Thhalv10020547m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 1.2e-10 72.4 182 32.4
Carub.0002s0017 Capsella rubella HOM05D000162 ORTHO05D000090 2.6e-10 71.2 95 42.1
Carub.0002s0209 Capsella rubella HOM05D000162 ORTHO05D003288 2.6e-10 71.2 66 57.6
Carub.0002s0190 Capsella rubella HOM05D000162 ORTHO05D003288 3.4e-10 70.9 131 38.2
AT1G62910 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 4.5e-10 70.5 126 36.5
AT1G63150 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 4.5e-10 70.5 126 36.5
AT1G06580 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 5.9e-10 70.1 132 34.1
BcaB05g22690 Brassica carinata HOM05D000162 ORTHO05D000003 5.9e-10 70.1 61 52.5
CARHR051150 Cardamine hirsuta HOM05D000162 ORTHO05D003288 5.9e-10 70.1 125 35.2
AL2G12820 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 7.7e-10 69.7 124 36.3
AL2G18840 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 7.7e-10 69.7 128 40.6
CARHR048770 Cardamine hirsuta HOM05D000162 ORTHO05D000090 7.7e-10 69.7 115 40.0
CARHR048820 Cardamine hirsuta HOM05D000162 ORTHO05D000090 1.3e-09 68.9 121 35.5
Sp2g01970 Schrenkiella parvula HOM05D000162 ORTHO05D000090 1.7e-09 68.6 75 49.3
AT1G63070 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 2.2e-09 68.2 121 32.2
BraA09t37013Z Brassica rapa HOM05D000162 ORTHO05D000090 2.2e-09 68.2 138 32.6
AT1G62680 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 2.9e-09 67.8 136 33.1
CARHR047980 Cardamine hirsuta HOM05D000162 ORTHO05D000090 3.8e-09 67.4 126 37.3
CARHR048440 Cardamine hirsuta HOM05D000162 ORTHO05D000090 3.8e-09 67.4 116 37.9
CARHR047970 Cardamine hirsuta HOM05D000162 ORTHO05D000090 8.5e-09 66.2 71 52.1
AL2G12470 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 1.4e-08 65.5 126 37.3
AL2G13140 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 1.4e-08 65.5 124 36.3
AL1G16610 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 3.2e-08 64.3 75 50.7
AL2G13130 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 3.2e-08 64.3 93 35.5
A09p13600 Brassica napus HOM05D000162 ORTHO05D000090 3.2e-08 64.3 138 31.2
BcaB07g31581 Brassica carinata HOM05D000162 ORTHO05D000090 4.2e-08 63.9 143 34.3
Sp2g00170 Schrenkiella parvula HOM05D000162 ORTHO05D000090 4.2e-08 63.9 135 34.8
AT1G62914 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 7.2e-08 63.2 124 32.3
C08p15550 Brassica napus HOM05D000162 ORTHO05D000090 7.2e-08 63.2 168 32.1
BolC8t49183H Brassica oleracea HOM05D000162 ORTHO05D000090 7.2e-08 63.2 168 32.1
CARHR048810 Cardamine hirsuta HOM05D000162 ORTHO05D000090 7.2e-08 63.2 124 34.7
AL2G13120 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 9.4e-08 62.8 136 33.8
CARHR048100 Cardamine hirsuta HOM05D015660 ORTHO05D003288 9.4e-08 62.8 36 80.6
CARHR048190 Cardamine hirsuta HOM05D000162 ORTHO05D000090 9.4e-08 62.8 122 32.8
AL1G23620 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 1.2e-07 62.4 181 29.3
Thhalv10024996m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 1.2e-07 62.4 144 35.4
CARHR047950 Cardamine hirsuta HOM05D015660 ORTHO05D003288 1.6e-07 62.0 36 77.8
AL2G11490 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 2.7e-07 61.2 121 29.8
Thhalv10023397m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 2.7e-07 61.2 75 46.7
A09p62690 Brassica napus HOM05D000162 ORTHO05D000090 4.7e-07 60.5 171 31.6
BcaC07g42059 Brassica carinata HOM05D000162 ORTHO05D000090 7.9e-07 59.7 142 35.2
Carub.0002s0191 Capsella rubella HOM05D000162 ORTHO05D000090 7.9e-07 59.7 118 35.6
CARHR051020 Cardamine hirsuta HOM05D000162 ORTHO05D000090 7.9e-07 59.7 64 54.7
CARHR091960 Cardamine hirsuta HOM05D000162 ORTHO05D000090 2.3e-06 58.2 180 30.0
AL1G23630 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 3.0e-06 57.8 150 31.3
AL2G12460 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 3.0e-06 57.8 121 33.9
A08p32720 Brassica napus HOM05D000162 ORTHO05D000090 3.0e-06 57.8 130 31.5
BraA08t35195Z Brassica rapa HOM05D000162 ORTHO05D000090 3.0e-06 57.8 130 31.5
AT1G63080 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 3.9e-06 57.4 121 35.5
CARHR046370 Cardamine hirsuta HOM05D000162 ORTHO05D000090 3.9e-06 57.4 138 29.7
AT1G12620 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 6.7e-06 56.6 112 34.8
AT1G63130 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 6.7e-06 56.6 125 34.4
AL2G13150 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 8.8e-06 56.2 121 35.5
AT1G12300 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 8.8e-06 56.2 137 32.1
Thhalv10029183m.g Eutrema salsugineum HOM05D015660 ORTHO05D003288 8.8e-06 56.2 42 59.5


User provided reference genes

Program Settings