Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p11400 Brassica napus HOM05D002856 ORTHO05D017644 1.8e-79 299.3 164 100.0
BolC9t54028H Brassica oleracea HOM05D002856 ORTHO05D017644 3.2e-60 235.3 167 82.0
A02p34410 Brassica napus HOM05D002856 ORTHO05D017644 5.0e-45 184.9 177 65.5
BraA02t08452Z Brassica rapa HOM05D002856 ORTHO05D017644 5.0e-45 184.9 177 65.5
BcaB01g03465 Brassica carinata HOM05D000039 ORTHO05D000370 8.6e-29 131.0 130 65.4
C07p07530 Brassica napus HOM05D000711 ORTHO05D021802 1.6e-22 110.2 185 47.0
BolC7t41171H Brassica oleracea HOM05D000711 ORTHO05D021802 1.6e-22 110.2 185 47.0
BcaC04g23172 Brassica carinata HOM05D029526 ORTHO05D017644 4.4e-17 92.0 89 71.9
C02p31290 Brassica napus HOM05D029526 ORTHO05D017644 1.7e-16 90.1 66 81.8
BraA06t24702Z Brassica rapa HOM05D000711 ORTHO05D000545 1.7e-16 90.1 67 80.6
BcaB04g17075 Brassica carinata HOM05D002856 ORTHO05D021802 2.2e-16 89.7 104 57.7
A04p17260 Brassica napus HOM05D002856 ORTHO05D003246 3.8e-16 89.0 106 58.5
A06p15910 Brassica napus HOM05D000711 ORTHO05D000545 4.9e-16 88.6 67 79.1
C08p06170 Brassica napus HOM05D029526 ORTHO05D017644 1.9e-15 86.7 64 82.8
BolC8t47461H Brassica oleracea HOM05D029526 ORTHO05D017644 1.9e-15 86.7 64 82.8
C05p18220 Brassica napus HOM05D000711 ORTHO05D000545 4.2e-15 85.5 67 76.1
BolC5t30529H Brassica oleracea HOM05D000711 ORTHO05D000545 9.2e-15 84.3 67 76.1
BcaC03g15456 Brassica carinata HOM05D001346 ORTHO05D014100 1.2e-14 84.0 62 82.3
BolC2t09171H Brassica oleracea HOM05D001346 ORTHO05D017644 1.2e-14 84.0 71 74.6
C01p42220 Brassica napus HOM05D002856 ORTHO05D003246 3.0e-13 79.3 107 52.3
BcaC09g49507 Brassica carinata HOM05D002856 ORTHO05D003246 2.1e-11 73.2 80 53.8
C01p35760 Brassica napus HOM05D002856 ORTHO05D003246 2.1e-11 73.2 80 53.8
BolC1t03537H Brassica oleracea HOM05D002856 ORTHO05D003246 2.1e-11 73.2 80 53.8
BraA01t02951Z Brassica rapa HOM05D002856 ORTHO05D003246 2.1e-11 73.2 80 53.8
Sp1g17600 Schrenkiella parvula HOM05D000711 ORTHO05D000545 3.6e-11 72.4 76 56.6
Sp2g05450 Schrenkiella parvula HOM05D002856 ORTHO05D003246 6.2e-11 71.6 80 52.5
AL2G18080 Arabidopsis lyrata HOM05D002856 ORTHO05D003246 1.1e-10 70.9 80 52.5
A01p28190 Brassica napus HOM05D002856 ORTHO05D003246 1.1e-10 70.9 80 52.5
Thhalv10023489m.g Eutrema salsugineum HOM05D002856 ORTHO05D003246 1.1e-10 70.9 80 52.5
BcaB04g20187 Brassica carinata HOM05D002856 ORTHO05D003246 1.8e-10 70.1 80 52.5
AT1G58120 Arabidopsis thaliana HOM05D002856 ORTHO05D003246 2.4e-10 69.7 80 51.2
CARHR053920 Cardamine hirsuta HOM05D002856 ORTHO05D003246 4.0e-10 68.9 80 50.0
AL1G32500 Arabidopsis lyrata HOM05D000711 ORTHO05D000545 6.9e-10 68.2 65 56.9
BcaC04g22118 Brassica carinata HOM05D002856 ORTHO05D003246 6.9e-10 68.2 80 48.8
A09p18530 Brassica napus HOM05D002856 ORTHO05D003246 6.9e-10 68.2 80 48.8
C09p23140 Brassica napus HOM05D002856 ORTHO05D003246 6.9e-10 68.2 80 48.8
BolC9t55233H Brassica oleracea HOM05D002856 ORTHO05D003246 6.9e-10 68.2 80 48.8
BraA09t37479Z Brassica rapa HOM05D002856 ORTHO05D003246 6.9e-10 68.2 80 48.8
Carub.0002s0649 Capsella rubella HOM05D002856 ORTHO05D003246 2.0e-09 66.6 80 50.0
A02p31080 Brassica napus HOM05D000711 ORTHO05D021802 7.6e-09 64.7 114 49.1
C07p17370 Brassica napus HOM05D002856 ORTHO05D021802 4.2e-07 58.9 40 75.0
AT1G19790 Arabidopsis thaliana HOM05D000711 ORTHO05D000545 1.6e-06 57.0 59 55.9
CARHR020300 Cardamine hirsuta HOM05D000711 ORTHO05D000545 4.6e-06 55.5 65 52.3
THA.LOC104816801 Tarenaya hassleriana HOM05D002856 ORTHO05D003246 6.0e-06 55.1 35 68.6
THA.LOC104820197 Tarenaya hassleriana HOM05D002856 ORTHO05D003246 6.0e-06 55.1 35 68.6


User provided reference genes

Program Settings