Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p10440 Brassica napus HOM05D002864 ORTHO05D008485 2.6e-36 154.8 76 100.0
CARHR288210 Cardamine hirsuta HOM05D002864 ORTHO05D008485 3.5e-09 64.7 34 91.2
AT2G07725 Arabidopsis thaliana HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 91.2
ATMG00210 Arabidopsis thaliana HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 91.2
CSS0047546 Camellia sinensis var. sinensis HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
CANSAT16G0032 Cannabis sativa HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
CAN.G366.9 Capsicum annuum HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
CAN.G537.1 Capsicum annuum HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
CAN.G539.3 Capsicum annuum HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
CAN.G761.1 Capsicum annuum HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
CARHR282720 Cardamine hirsuta HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 91.2
LjContig00315g0018050 Lotus japonicus HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
LjContig00439g0002067 Lotus japonicus HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
LjContig00446g0004288 Lotus japonicus HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
Lalb_Chr00c21g0405201 Lupinus albus HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
Lalb_Chr00c21g0405251 Lupinus albus HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
Lalb_Chr00c21g0405391 Lupinus albus HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
Lalb_Chr00c24g0407171 Lupinus albus HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
Lalb_Chr07g0190471 Lupinus albus HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
Nn1g09937 Nelumbo nucifera HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
Nn1g10176 Nelumbo nucifera HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
Psat0ss7220g0040 Pisum sativum HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
Solyc00g500362.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
TAR371G0939 Trochodendron aralioides HOM05D002864 ORTHO05D008485 4.6e-09 64.3 34 88.2
A04p09410 Brassica napus HOM05D002864 ORTHO05D008485 6.0e-09 63.9 34 88.2
BolSC28t60372H Brassica oleracea HOM05D002864 ORTHO05D008485 6.0e-09 63.9 34 88.2
BraSC159t45731Z Brassica rapa HOM05D002864 ORTHO05D008485 6.0e-09 63.9 34 88.2
BraSC54t46369Z Brassica rapa HOM05D002864 ORTHO05D008485 6.0e-09 63.9 34 88.2
Peaxi162Scf36888g00001 Petunia axillaris HOM05D002864 ORTHO05D008485 6.0e-09 63.9 33 87.9
PGR028G0017 Punica granatum HOM05D002864 ORTHO05D008485 6.0e-09 63.9 34 88.2
Nitab4.5_0004300g0150 Nicotiana tabacum HOM05D002864 ORTHO05D008485 1.3e-08 62.8 34 85.3
Sed0011141 Sechium edule HOM05D002864 ORTHO05D008485 1.3e-08 62.8 32 90.6
Sed0025017 Sechium edule HOM05D002864 ORTHO05D008485 1.3e-08 62.8 32 90.6
Actinidia34819 Actinidia chinensis HOM05D002864 ORTHO05D008485 2.3e-08 62.0 32 87.5
Cfa021370 Carpinus fangiana HOM05D002864 ORTHO05D008485 2.3e-08 62.0 32 87.5
Thhalv10001274m.g Eutrema salsugineum HOM05D002864 ORTHO05D008485 2.3e-08 62.0 32 87.5
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 2.3e-08 62.0 32 87.5
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 2.3e-08 62.0 32 87.5
PGSC0003DMG400033612 Solanum tuberosum HOM05D002864 ORTHO05D008485 2.3e-08 62.0 34 85.3
Lsat_1_v5_gn_4_66001 Lactuca sativa HOM05D002864 ORTHO05D008485 3.9e-08 61.2 34 82.4
Lsat_1_v5_gn_7_96661 Lactuca sativa HOM05D002864 ORTHO05D008485 3.9e-08 61.2 34 82.4
SalBow1G5070 Salvia bowleyana HOM05D002864 ORTHO05D008485 5.1e-08 60.8 32 84.4
arahy.Tifrunner.gnm1.ann1.ID22MY Arachis hypogaea HOM05D002864 ORTHO05D008485 6.6e-08 60.5 34 79.4
CAN.G826.1 Capsicum annuum HOM05D002864 ORTHO05D008485 6.6e-08 60.5 34 79.4
Lalb_Chr11g0070141 Lupinus albus HOM05D002864 ORTHO05D008485 6.6e-08 60.5 34 85.3
Lalb_Chr11g0070221 Lupinus albus HOM05D002864 ORTHO05D008485 6.6e-08 60.5 34 85.3
Atru.chr6.1811 Acer truncatum HOM05D002864 ORTHO05D008485 8.7e-08 60.1 32 84.4
Ah.10g028190 Amaranthus hybridus HOM05D002864 ORTHO05D007972 8.7e-08 60.1 33 84.8
Ah.10g028740 Amaranthus hybridus HOM05D002864 ORTHO05D007972 8.7e-08 60.1 33 84.8
Aqoxy12s038 Aquilegia oxysepala HOM05D002864 ORTHO05D008485 8.7e-08 60.1 34 82.4
arahy.Tifrunner.gnm1.ann1.IM9F8N Arachis hypogaea HOM05D002864 ORTHO05D008485 8.7e-08 60.1 33 78.8
CAN.G1001.40 Capsicum annuum HOM05D002864 ORTHO05D008485 1.1e-07 59.7 47 68.1
HanXRQChr01g0001471 Helianthus annuus HOM05D002864 ORTHO05D008485 1.9e-07 58.9 34 79.4
HanXRQChr04g0101201 Helianthus annuus HOM05D002864 ORTHO05D008485 1.9e-07 58.9 34 79.4
HanXRQMTg0579191 Helianthus annuus HOM05D002864 ORTHO05D008485 1.9e-07 58.9 34 79.4
ATR0709G086 Amborella trichopoda HOM05D002864 ORTHO05D008485 4.3e-07 57.8 34 82.4
ClCG09G013010 Citrullus lanatus HOM05D002864 ORTHO05D007972 4.3e-07 57.8 30 86.7
Lj2A1230T121 Lonicera japonica HOM05D002864 ORTHO05D008485 4.3e-07 57.8 32 81.2
RhsimMtG0002800 Rhododendron simsii HOM05D002864 ORTHO05D008485 4.3e-07 57.8 32 84.4
SHI26647 Sapria himalayana HOM05D002864 ORTHO05D008485 5.6e-07 57.4 31 80.6
SGA_v2.0_scaffold420G51305 Striga asiatica HOM05D002864 ORTHO05D008485 7.3e-07 57.0 30 83.3
unitig_87.g28031 Utricularia gibba HOM05D002864 ORTHO05D008485 7.3e-07 57.0 30 83.3
ATR1100G026 Amborella trichopoda HOM05D002864 ORTHO05D008485 9.6e-07 56.6 33 75.8
Rhsim07G0136600 Rhododendron simsii HOM05D002864 ORTHO05D008485 1.2e-06 56.2 32 84.4
Phvul.011G109300 Phaseolus vulgaris HOM05D007099 ORTHO05D009081 1.6e-06 55.8 33 72.7
AUR62042335 Chenopodium quinoa HOM05D002864 ORTHO05D008485 4.7e-06 54.3 30 83.3


User provided reference genes

Program Settings