Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p08050 Brassica napus HOM05D001053 ORTHO05D004820 1.3e-108 396.4 189 100.0
BraA09t36370Z Brassica rapa HOM05D001053 ORTHO05D004820 2.5e-96 355.5 234 76.9
A09p07210 Brassica napus HOM05D001053 ORTHO05D004820 3.8e-89 331.6 247 70.4
BcaC04g23465 Brassica carinata HOM05D001053 ORTHO05D004820 4.8e-84 314.7 222 75.2
Thhalv10003787m.g Eutrema salsugineum HOM05D001053 ORTHO05D004820 8.9e-78 293.9 223 66.4
A03p46750 Brassica napus HOM05D001053 ORTHO05D004820 2.0e-77 292.7 221 65.2
C07p44790 Brassica napus HOM05D001053 ORTHO05D004820 2.0e-77 292.7 221 65.2
BolC7t45003H Brassica oleracea HOM05D001053 ORTHO05D004820 2.0e-77 292.7 221 65.2
BraA03t13797Z Brassica rapa HOM05D001053 ORTHO05D004820 2.0e-77 292.7 221 65.2
CARHR274760 Cardamine hirsuta HOM05D001053 ORTHO05D004820 3.1e-75 285.4 224 64.3
Sp2g24350 Schrenkiella parvula HOM05D001053 ORTHO05D004820 9.2e-75 283.9 223 63.7
BraA09t36371Z Brassica rapa HOM05D001053 ORTHO05D004820 1.7e-73 279.6 224 63.8
AL8G37710 Arabidopsis lyrata HOM05D001053 ORTHO05D004820 2.9e-73 278.9 222 63.5
AT5G61060 Arabidopsis thaliana HOM05D001053 ORTHO05D004820 3.8e-73 278.5 219 64.4
BcaC04g23464 Brassica carinata HOM05D001053 ORTHO05D004820 8.6e-73 277.3 219 63.9
BolC9t53720H Brassica oleracea HOM05D001053 ORTHO05D004820 8.6e-73 277.3 219 63.9
C09p08060 Brassica napus HOM05D001053 ORTHO05D004820 1.9e-72 276.2 219 63.5
BolC9t53719H Brassica oleracea HOM05D001053 ORTHO05D004820 2.5e-72 275.8 157 87.9
THA.LOC104801191 Tarenaya hassleriana HOM05D001053 ORTHO05D004820 7.5e-69 264.2 224 59.8
AT5G61050 Arabidopsis thaliana HOM05D001053 ORTHO05D004820 2.2e-68 262.7 223 60.5
Carub.0008s2174 Capsella rubella HOM05D001053 ORTHO05D004820 8.3e-68 260.8 223 61.0
Carub.0008s2175 Capsella rubella HOM05D001053 ORTHO05D004820 2.4e-67 259.2 223 59.6
Aa31LG11G2250 Aethionema arabicum HOM05D001053 ORTHO05D004820 7.0e-67 257.7 224 58.9
BcaC06g33180 Brassica carinata HOM05D001053 ORTHO05D004820 5.0e-65 251.5 222 59.5
Potri.004G092900 Populus trichocarpa HOM05D001053 ORTHO05D004820 1.1e-59 233.8 221 55.7
Eucgr.K02528 Eucalyptus grandis HOM05D001053 ORTHO05D004820 4.1e-59 231.9 223 53.8
Duzib068G1187 Durio zibethinus HOM05D001053 ORTHO05D004820 2.1e-58 229.6 220 54.1
Sabra04G0062400 Salix brachista HOM05D001053 ORTHO05D004820 2.1e-58 229.6 221 54.3
Eucgr.L02060 Eucalyptus grandis HOM05D001053 ORTHO05D004820 2.7e-58 229.2 223 53.4
Duzib205G1512 Durio zibethinus HOM05D001053 ORTHO05D004820 4.6e-58 228.4 220 53.6
Thecc.03G101100 Theobroma cacao HOM05D001053 ORTHO05D004820 1.7e-57 226.5 216 53.7
Gorai.003G101100 Gossypium raimondii HOM05D001053 ORTHO05D004820 2.3e-57 226.1 220 54.1
COL.COLO4_06864 Corchorus olitorius HOM05D001053 ORTHO05D004820 3.0e-57 225.7 222 55.0
Eucgr.B01265 Eucalyptus grandis HOM05D001053 ORTHO05D004820 1.5e-56 223.4 223 52.0
Hund02590 Selenicereus undatus HOM05D001053 ORTHO05D004820 3.6e-55 218.8 221 51.6
GSVIVG01007870001 Vitis vinifera HOM05D001053 ORTHO05D004820 3.6e-55 218.8 218 52.8
Eucgr.K02530 Eucalyptus grandis HOM05D001053 ORTHO05D004820 4.7e-55 218.4 223 51.6
QL10p019416 Quercus lobata HOM05D001053 ORTHO05D004820 4.7e-55 218.4 216 53.2
Manes.06G085100 Manihot esculenta HOM05D001053 ORTHO05D004820 8.1e-55 217.6 227 50.7
Atru.chr9.430 Acer truncatum HOM05D001053 ORTHO05D004820 2.3e-54 216.1 222 53.2
PGR044G1429 Punica granatum HOM05D001053 ORTHO05D004820 2.3e-54 216.1 220 53.6
Gohir.A03G069900 Gossypium hirsutum HOM05D001053 ORTHO05D004820 3.1e-54 215.7 211 55.0
PSO017G5497 Papaver somniferum HOM05D001053 ORTHO05D004820 2.0e-53 213.0 221 52.5
Dinv17408 Davidia involucrata HOM05D001053 ORTHO05D004820 2.6e-53 212.6 217 53.9
Lj5C103T5 Lonicera japonica HOM05D001053 ORTHO05D004820 2.6e-53 212.6 217 53.5
vmacro17607 Vaccinium macrocarpon HOM05D001053 ORTHO05D004820 2.6e-53 212.6 223 52.5
Cfa019326 Carpinus fangiana HOM05D001053 ORTHO05D004820 4.4e-53 211.8 218 51.4
CiPaw.11G052800 Carya illinoinensis HOM05D001053 ORTHO05D004820 4.4e-53 211.8 217 51.2
Oeu031813.2 Olea europaea HOM05D001053 ORTHO05D004820 5.8e-53 211.5 218 51.4
Ah.11g047830 Amaranthus hybridus HOM05D001053 ORTHO05D004820 1.3e-52 210.3 212 50.9
EL10Ac5g11123 Beta vulgaris HOM05D001053 ORTHO05D004820 1.7e-52 209.9 218 51.8
Lsat_1_v5_gn_4_111000 Lactuca sativa HOM05D001053 ORTHO05D004820 1.7e-52 209.9 217 52.5
Ciclev10019240m.g Citrus clementina HOM05D001053 ORTHO05D004820 3.7e-52 208.8 217 52.5
Lalb_Chr12g0197171 Lupinus albus HOM05D001053 ORTHO05D004820 4.9e-52 208.4 220 48.2
Sc04g0004320 Simmondsia chinensis HOM05D001053 ORTHO05D004820 4.9e-52 208.4 219 50.7
AUR62008521 Chenopodium quinoa HOM05D001053 ORTHO05D004820 8.3e-52 207.6 218 48.6
RcHm_v2.0_Chr7g0183031 Rosa chinensis HOM05D001053 ORTHO05D004820 8.3e-52 207.6 224 50.9
HanXRQChr16g0502421 Helianthus annuus HOM05D001053 ORTHO05D004820 1.9e-51 206.5 222 50.9
Rhsim08G0146300 Rhododendron simsii HOM05D001053 ORTHO05D004820 1.9e-51 206.5 219 51.1
CANSAT80G2151 Cannabis sativa HOM05D001053 ORTHO05D004820 2.4e-51 206.1 226 50.0
Lj4g0023799 Lotus japonicus HOM05D001053 ORTHO05D004820 2.4e-51 206.1 221 49.8
Medtr4g109500 Medicago truncatula HOM05D001053 ORTHO05D004820 4.1e-51 205.3 215 51.2
Peaxi162Scf00201g00236 Petunia axillaris HOM05D001053 ORTHO05D004820 5.4e-51 204.9 218 48.6
Psat0s3618g0040 Pisum sativum HOM05D001053 ORTHO05D004820 5.4e-51 204.9 217 49.8
AUR62021568 Chenopodium quinoa HOM05D001053 ORTHO05D004820 7.1e-51 204.5 218 48.2
ECA232G4674 Erigeron canadensis HOM05D001053 ORTHO05D004820 7.1e-51 204.5 222 51.4
Glyma.05G021400 Glycine max HOM05D001053 ORTHO05D004820 1.2e-50 203.8 215 47.4
Aqoxy3G03637 Aquilegia oxysepala HOM05D001053 ORTHO05D004820 1.6e-50 203.4 217 49.3
Nitab4.5_0012564g0010 Nicotiana tabacum HOM05D001053 ORTHO05D004820 2.1e-50 203.0 218 49.5
TWI81G0708 Tripterygium wilfordii HOM05D001053 ORTHO05D004820 2.1e-50 203.0 221 50.2
Nn3g17442 Nelumbo nucifera HOM05D001053 ORTHO05D004820 2.7e-50 202.6 222 49.5
Prupe.5G204500 Prunus persica HOM05D001053 ORTHO05D004820 3.5e-50 202.2 225 49.3
FvH4_5g13910 Fragaria vesca HOM05D001053 ORTHO05D004820 4.6e-50 201.8 220 49.1
Actinidia04826 Actinidia chinensis HOM05D001053 ORTHO05D004820 6.0e-50 201.4 219 50.7
FAN18G3650 Fragaria x ananassa HOM05D001053 ORTHO05D004820 2.3e-49 199.5 220 48.6
Solyc03g115150.4 Solanum lycopersicum HOM05D001053 ORTHO05D004820 2.3e-49 199.5 218 48.6
Nitab4.5_0001485g0180 Nicotiana tabacum HOM05D001053 ORTHO05D004820 3.0e-49 199.1 218 47.7
CsaV3_1G002870 Cucumis sativus L. HOM05D001053 ORTHO05D004820 5.1e-49 198.4 223 49.3
Cc00_g07600 Coffea canephora HOM05D001053 ORTHO05D004820 1.1e-48 197.2 220 46.8
arahy.Tifrunner.gnm1.ann1.30WRMH Arachis hypogaea HOM05D001053 ORTHO05D004820 1.5e-48 196.8 216 46.8
Sopen03g034210 Solanum pennellii HOM05D001053 ORTHO05D004820 1.5e-48 196.8 218 48.2
VMungo1215G0855 Vigna mungo HOM05D001053 ORTHO05D004820 1.9e-48 196.4 215 46.5
Phvul.003G185200 Phaseolus vulgaris HOM05D001053 ORTHO05D004820 2.5e-48 196.1 216 46.3
MSTRG.22987 Avicennia marina HOM05D001053 ORTHO05D004820 3.3e-48 195.7 217 47.9
TPR.G2048 Trifolium pratense HOM05D001053 ORTHO05D004820 4.3e-48 195.3 218 45.9
ClCG06G015680 Citrullus lanatus HOM05D001053 ORTHO05D004820 7.3e-48 194.5 223 48.9
Glyma.17G078000 Glycine max HOM05D001053 ORTHO05D004820 9.5e-48 194.1 221 45.7
MD14G1211400 Malus domestica HOM05D001053 ORTHO05D004820 9.5e-48 194.1 220 46.4
arahy.Tifrunner.gnm1.ann1.EY28RQ Arachis hypogaea HOM05D001053 ORTHO05D004820 1.2e-47 193.7 215 47.0
CAN.G1228.29 Capsicum annuum HOM05D001053 ORTHO05D004820 2.1e-47 193.0 218 46.3
FAN08G0910 Fragaria x ananassa HOM05D001053 ORTHO05D004820 2.1e-47 193.0 226 48.7
TAR629G3345 Trochodendron aralioides HOM05D001053 ORTHO05D004820 3.6e-47 192.2 262 43.5
Hma1.2p1_0060F.1_g033160 Hydrangea macrophylla HOM05D001053 ORTHO05D004820 6.2e-47 191.4 217 49.3
MELO3C017221.2 Cucumis melo HOM05D001053 ORTHO05D004820 8.1e-47 191.0 223 48.4
MD06G1202300 Malus domestica HOM05D001053 ORTHO05D004820 8.1e-47 191.0 222 47.7
FAN13G0112 Fragaria x ananassa HOM05D001053 ORTHO05D004820 1.4e-46 190.3 220 49.1
CDE02G2613 Ceratophyllum demersum HOM05D001053 ORTHO05D004820 2.4e-46 189.5 217 48.8
Sed0006061 Sechium edule HOM05D001053 ORTHO05D004820 1.2e-45 187.2 227 49.8
Ca_21779_v3 Cicer arietinum L. HOM05D001053 ORTHO05D004820 1.5e-45 186.8 219 45.7
Os07g0602200 Oryza sativa ssp. japonica HOM05D001053 ORTHO05D004820 9.9e-45 184.1 238 44.5
Zm00001eb108570 Zea mays HOM05D001053 ORTHO05D004820 1.3e-44 183.7 226 44.2
Haze_07717 Corylus avellana HOM05D001053 ORTHO05D004820 3.2e-43 179.1 268 40.7
DCAR_011558 Daucus carota HOM05D001053 ORTHO05D004820 4.2e-43 178.7 195 49.7
unitig_26.g9658 Utricularia gibba HOM05D001053 ORTHO05D004820 9.2e-43 177.6 223 44.8
Cpa.g.sc94.50 Carica papaya HOM05D001053 ORTHO05D004820 3.5e-42 175.6 200 49.0
HPP92_006052 Vanilla planifolia HOM05D001053 ORTHO05D004820 1.6e-39 166.8 195 44.6
PGSC0003DMG400024639 Solanum tuberosum HOM05D001053 ORTHO05D004820 8.7e-33 144.4 182 45.1
SGA_v2.0_scaffold313G48312 Striga asiatica HOM05D000001 ORTHO05D004820 8.7e-33 144.4 123 60.2
Gohir.D03G096500 Gossypium hirsutum HOM05D001053 ORTHO05D004820 2.0e-29 133.3 133 50.4
Pp3c14_21020 Physcomitrium patens HOM05D001053 ORTHO05D004820 2.6e-29 132.9 215 35.3
SMO203G0267 Selaginella moellendorffii HOM05D001053 ORTHO05D004820 5.4e-27 125.2 204 34.8
ATR0064G039 Amborella trichopoda HOM05D001053 ORTHO05D004820 1.0e-25 120.9 163 43.6
Mapoly0023s0094 Marchantia polymorpha HOM05D001053 ORTHO05D004820 6.7e-25 118.2 227 32.6
CBR_g20016 Chara braunii HOM05D001053 ORTHO05D004820 6.7e-17 91.7 213 31.9
MCO07G211 Micromonas commoda HOM05D001053 ORTHO05D004820 5.3e-14 82.0 166 34.3
Migut.I00311 Erythranthe guttata HOM05D001053 ORTHO05D004820 1.5e-08 63.9 53 60.4


User provided reference genes

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