Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 4.2e-170 601.3 303 100.0
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 4.2e-170 601.3 303 100.0
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 5.6e-167 590.9 303 98.3
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 3.1e-165 585.1 303 97.4
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 4.0e-165 584.7 303 97.4
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 2.3e-160 568.9 303 94.7
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 3.8e-155 551.6 301 91.7
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 1.9e-154 549.3 303 90.8
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 7.1e-154 547.4 303 90.4
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 6.0e-153 544.3 303 90.1
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 1.9e-151 539.3 299 89.6
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 1.9e-151 539.3 299 89.6
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 5.6e-151 537.7 303 88.8
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 2.1e-150 535.8 299 88.6
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 1.3e-147 526.6 299 87.6
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 1.3e-147 526.6 299 87.6
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 1.3e-147 526.6 299 87.6
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 3.3e-135 485.3 299 81.3
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 4.8e-134 481.5 301 78.4
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 8.2e-134 480.7 301 78.7
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 2.7e-129 465.7 300 78.0
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.1e-127 460.3 298 75.2
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.1e-127 460.3 298 75.2
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 1.3e-126 456.8 298 74.8
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 1.3e-126 456.8 300 73.3
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 3.7e-126 455.3 300 75.3
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 6.3e-126 454.5 300 75.0
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 6.3e-126 454.5 298 76.2
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 8.2e-126 454.1 300 73.7
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 8.2e-126 454.1 300 73.7
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 1.4e-125 453.4 300 73.7
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 1.8e-125 453.0 300 75.0
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 2.4e-125 452.6 300 74.3
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 3.1e-125 452.2 300 73.7
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 4.1e-125 451.8 300 74.0
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 4.1e-125 451.8 300 74.3
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 5.3e-125 451.4 300 73.3
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 5.3e-125 451.4 300 73.3
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 1.2e-124 450.3 302 73.5
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 1.2e-124 450.3 300 74.3
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 1.5e-124 449.9 300 73.0
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 4.5e-124 448.4 300 73.3
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 4.5e-124 448.4 300 73.3
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 4.5e-124 448.4 298 74.8
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 5.9e-124 448.0 300 73.3
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 1.7e-123 446.4 300 75.0
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 2.9e-123 445.7 298 74.2
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 8.5e-123 444.1 298 73.5
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 1.1e-122 443.7 300 73.3
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 1.9e-122 443.0 301 74.1
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.2e-122 442.2 298 74.2
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 5.5e-122 441.4 302 71.2
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 7.2e-122 441.0 298 73.8
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 7.2e-122 441.0 300 72.7
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 9.4e-122 440.7 298 73.2
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 1.2e-121 440.3 300 73.0
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.6e-121 439.9 298 72.1
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.6e-121 439.9 298 73.5
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 3.6e-121 438.7 298 73.5
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.6e-121 438.7 302 72.2
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 4.7e-121 438.3 300 73.0
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 6.1e-121 438.0 300 72.0
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 6.1e-121 438.0 300 73.0
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.8e-120 436.4 298 72.8
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 1.8e-120 436.4 300 70.0
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 3.9e-120 435.3 302 71.2
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 3.9e-120 435.3 300 71.7
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 5.2e-120 434.9 303 71.6
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 6.7e-120 434.5 300 72.0
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 8.8e-120 434.1 298 71.5
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 2.0e-119 433.0 300 70.7
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 3.3e-119 432.2 300 70.7
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 4.4e-119 431.8 300 71.0
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.7e-118 429.9 300 71.7
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 2.2e-118 429.5 298 70.5
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 4.1e-117 425.2 300 70.0
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 5.3e-117 424.9 304 69.4
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 2.0e-116 422.9 300 70.0
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.5e-116 422.2 294 70.4
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 2.9e-115 419.1 304 69.1
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 4.2e-114 415.2 302 68.9
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 2.1e-113 412.9 303 69.3
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 4.7e-113 411.8 300 66.7
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 6.1e-113 411.4 303 69.3
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 3.0e-112 409.1 293 70.6
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 5.2e-112 408.3 302 69.2
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 1.5e-111 406.8 303 67.3
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 9.7e-111 404.1 300 68.0
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 9.7e-111 404.1 302 68.9
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 1.7e-110 403.3 310 66.1
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 3.7e-110 402.1 302 66.6
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 8.2e-110 401.0 284 69.0
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 2.2e-107 392.9 303 66.0
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 4.7e-105 385.2 275 69.8
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.8e-104 383.3 302 64.2
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 1.0e-99 367.5 248 70.6
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 1.1e-98 364.0 248 72.6
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 1.2e-95 354.0 221 75.1
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 4.4e-95 352.1 297 58.9
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 2.0e-92 343.2 303 59.1
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.7e-91 340.1 303 58.4
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 5.0e-91 338.6 248 68.1
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 6.6e-91 338.2 224 73.7
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 7.3e-90 334.7 256 66.8
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 1.4e-88 330.5 254 64.6
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 3.0e-88 329.3 219 74.0
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 4.0e-88 328.9 227 71.4
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 2.9e-86 322.8 235 66.4
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 5.4e-85 318.5 220 70.5
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 5.4e-85 318.5 224 68.8
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 4.3e-82 308.9 277 57.0
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 4.3e-74 282.3 338 47.6
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 1.4e-69 267.3 300 52.3
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 3.9e-67 259.2 173 69.9
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 4.0e-56 222.6 322 42.2
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 1.5e-42 177.6 332 36.7
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 2.1e-41 173.7 157 59.9
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 2.6e-39 166.8 177 49.7
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 3.4e-39 166.4 166 51.8
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 2.3e-35 153.7 105 72.4
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 2.8e-33 146.7 300 35.7
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 2.0e-31 140.6 87 72.4
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 1.2e-23 114.8 353 31.2
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 2.6e-23 113.6 88 63.6
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 8.5e-22 108.6 135 48.9
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 2.5e-21 107.1 72 66.7
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 2.5e-21 107.1 86 66.3
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 3.2e-21 106.7 91 62.6
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 3.7e-17 93.2 64 76.6
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 6.3e-17 92.4 67 56.7
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 3.7e-09 66.6 40 72.5


User provided reference genes

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