Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p37750 Brassica napus HOM05D001999 ORTHO05D001994 6.3e-48 193.7 96 100.0
BcaC07g40784 Brassica carinata HOM05D001999 ORTHO05D001994 4.6e-30 134.4 70 95.7
BcaC05g25970 Brassica carinata HOM05D001999 ORTHO05D001994 3.0e-29 131.7 73 93.2
C05p19250 Brassica napus HOM05D001999 ORTHO05D001994 5.0e-29 131.0 69 95.7
BolC5t30625H Brassica oleracea HOM05D001999 ORTHO05D001994 5.0e-29 131.0 69 95.7
BcaC06g33722 Brassica carinata HOM05D001999 ORTHO05D001994 9.5e-28 126.7 70 92.9
C07p38590 Brassica napus HOM05D001999 ORTHO05D001994 3.6e-27 124.8 69 92.8
BolC7t44380H Brassica oleracea HOM05D001999 ORTHO05D001994 3.6e-27 124.8 69 92.8
BcaB02g08752 Brassica carinata HOM05D001999 ORTHO05D001994 8.0e-27 123.6 86 74.4
A05p00260 Brassica napus HOM05D001999 ORTHO05D001994 4.0e-26 121.3 88 76.1
BraA05t19023Z Brassica rapa HOM05D001999 ORTHO05D001994 4.0e-26 121.3 88 76.1
BcaC02g12548 Brassica carinata HOM05D001999 ORTHO05D001994 4.9e-24 114.4 87 73.6
C04p00170 Brassica napus HOM05D001999 ORTHO05D001994 1.2e-22 109.8 88 72.7
Sp4g29640 Schrenkiella parvula HOM05D001999 ORTHO05D001994 1.7e-21 105.9 90 67.8
BolC4t21664H Brassica oleracea HOM05D001999 ORTHO05D001994 6.6e-21 104.0 87 70.1
Thhalv10001505m.g Eutrema salsugineum HOM05D001999 ORTHO05D001994 1.1e-15 86.7 90 57.8
AL4G47270 Arabidopsis lyrata HOM05D001999 ORTHO05D001994 2.1e-14 82.4 87 58.6
AT2G47700 Arabidopsis thaliana HOM05D001999 ORTHO05D001994 1.1e-12 76.6 61 65.6
Carub.0004s3042 Capsella rubella HOM05D001999 ORTHO05D001994 1.1e-12 76.6 87 55.2
Aa31LG1G29020 Aethionema arabicum HOM05D001999 ORTHO05D001994 1.4e-10 69.7 64 54.7
THA.LOC104817500 Tarenaya hassleriana HOM05D001999 ORTHO05D001994 6.8e-10 67.4 88 50.0
HanXRQChr11g0339901 Helianthus annuus HOM05D001999 ORTHO05D001994 2.2e-08 62.4 59 50.8
arahy.Tifrunner.gnm1.ann1.5G7CV2 Arachis hypogaea HOM05D001999 ORTHO05D001994 6.4e-08 60.8 63 49.2
arahy.Tifrunner.gnm1.ann1.XS7LB4 Arachis hypogaea HOM05D001999 ORTHO05D001994 6.4e-08 60.8 63 49.2
Duzib211G0185 Durio zibethinus HOM05D001999 ORTHO05D001994 6.4e-08 60.8 59 52.5
Psat0s1830g0240 Pisum sativum HOM05D001999 ORTHO05D001994 6.4e-08 60.8 56 55.4
Rhsim13G0010900 Rhododendron simsii HOM05D001999 ORTHO05D001994 8.4e-08 60.5 56 51.8
Duzib133G0338 Durio zibethinus HOM05D001999 ORTHO05D001994 1.1e-07 60.1 59 50.8
Sabra13G0015200 Salix brachista HOM05D000070 ORTHO05D001994 1.1e-07 60.1 46 60.9
Duzib177G1061 Durio zibethinus HOM05D001999 ORTHO05D001994 1.4e-07 59.7 50 58.0
vmacro02456 Vaccinium macrocarpon HOM05D001999 ORTHO05D001994 1.9e-07 59.3 56 50.0
Manes.08G117000 Manihot esculenta HOM05D001999 ORTHO05D001994 2.4e-07 58.9 50 56.0
Manes.09G170900 Manihot esculenta HOM05D001999 ORTHO05D001994 2.4e-07 58.9 59 50.8
Hund21714 Selenicereus undatus HOM05D001999 ORTHO05D001994 2.4e-07 58.9 66 47.0
vmacro15001 Vaccinium macrocarpon HOM05D001999 ORTHO05D001994 2.4e-07 58.9 59 52.5
Actinidia35557 Actinidia chinensis HOM05D001999 ORTHO05D001994 3.2e-07 58.5 62 51.6
PGR031G0021 Punica granatum HOM05D001999 ORTHO05D001994 3.2e-07 58.5 63 49.2
Actinidia19777 Actinidia chinensis HOM05D001999 ORTHO05D001994 4.2e-07 58.2 54 51.9
Eucgr.B01912 Eucalyptus grandis HOM05D001999 ORTHO05D001994 4.2e-07 58.2 46 56.5
Peaxi162Scf00037g01221 Petunia axillaris HOM05D001999 ORTHO05D001994 4.2e-07 58.2 67 50.7
Sabra13G0013900 Salix brachista HOM05D000092 ORTHO05D000042 4.2e-07 58.2 32 78.1
Sabra13G0019100 Salix brachista HOM05D001999 ORTHO05D001994 4.2e-07 58.2 32 78.1
Solyc01g099790.3 Solanum lycopersicum HOM05D001999 ORTHO05D001994 4.2e-07 58.2 56 55.4
Sopen01g043310 Solanum pennellii HOM05D001999 ORTHO05D001994 4.2e-07 58.2 56 55.4
Ciclev10001227m.g Citrus clementina HOM05D001999 ORTHO05D001994 5.4e-07 57.8 84 45.2
ECA236G3557 Erigeron canadensis HOM05D001999 ORTHO05D001994 5.4e-07 57.8 66 48.5
Oeu043739.1 Olea europaea HOM05D001999 ORTHO05D001994 5.4e-07 57.8 59 54.2
Psat0s1500g0040 Pisum sativum HOM05D001999 ORTHO05D001994 5.4e-07 57.8 84 39.3
Sed0027191 Sechium edule HOM05D001999 ORTHO05D001994 5.4e-07 57.8 59 49.2
Cfa006634 Carpinus fangiana HOM05D001999 ORTHO05D001994 7.1e-07 57.4 46 58.7
Haze_04134 Corylus avellana HOM05D001999 ORTHO05D001994 7.1e-07 57.4 46 58.7
FvH4_6g06620 Fragaria vesca HOM05D001999 ORTHO05D001994 7.1e-07 57.4 46 58.7
Potri.005G024700 Populus trichocarpa HOM05D001999 ORTHO05D001994 7.1e-07 57.4 46 58.7
Potri.013G015600 Populus trichocarpa HOM05D001999 ORTHO05D001994 7.1e-07 57.4 46 58.7
Prupe.6G320100 Prunus persica HOM05D001999 ORTHO05D001994 7.1e-07 57.4 46 58.7
QL03p020135 Quercus lobata HOM05D001999 ORTHO05D001994 7.1e-07 57.4 46 58.7
Sabra05G0030100 Salix brachista HOM05D001999 ORTHO05D001994 7.1e-07 57.4 46 58.7
Sabra13G0013700 Salix brachista HOM05D001999 ORTHO05D001994 7.1e-07 57.4 46 58.7
PGSC0003DMG400024717 Solanum tuberosum HOM05D001999 ORTHO05D001994 7.1e-07 57.4 56 55.4
TAR622G0837 Trochodendron aralioides HOM05D001999 ORTHO05D001994 7.1e-07 57.4 46 58.7
EL10Ac4g09908 Beta vulgaris HOM05D001999 ORTHO05D001994 9.3e-07 57.0 52 51.9
Cpa.g.sc327.4 Carica papaya HOM05D001999 ORTHO05D001994 9.3e-07 57.0 50 56.0
Cc02_g34200 Coffea canephora HOM05D001999 ORTHO05D001994 9.3e-07 57.0 50 54.0
Gohir.A13G174400 Gossypium hirsutum HOM05D001999 ORTHO05D001994 9.3e-07 57.0 50 56.0
Gohir.D13G180200 Gossypium hirsutum HOM05D001999 ORTHO05D001994 9.3e-07 57.0 50 56.0
Gorai.013G205600 Gossypium raimondii HOM05D001999 ORTHO05D001994 9.3e-07 57.0 50 56.0
HanXRQChr05g0136211 Helianthus annuus HOM05D001999 ORTHO05D001994 9.3e-07 57.0 59 50.8
Medtr1g083390 Medicago truncatula HOM05D001999 ORTHO05D001994 9.3e-07 57.0 55 52.7
Nitab4.5_0010216g0020 Nicotiana tabacum HOM05D001999 ORTHO05D001994 9.3e-07 57.0 67 50.7
Oeu043342.1 Olea europaea HOM05D001999 ORTHO05D001994 9.3e-07 57.0 46 58.7
GSVIVG01031134001 Vitis vinifera HOM05D001999 ORTHO05D001994 9.3e-07 57.0 56 50.0
ATR0582G131 Amborella trichopoda HOM05D001999 ORTHO05D001994 1.2e-06 56.6 58 48.3
BcaB04g19258 Brassica carinata HOM05D001999 ORTHO05D001994 1.2e-06 56.6 62 43.5
CiPaw.07G107800 Carya illinoinensis HOM05D001999 ORTHO05D001994 1.2e-06 56.6 46 58.7
Glyma.10G151500 Glycine max HOM05D001999 ORTHO05D001994 1.2e-06 56.6 50 54.0
Glyma.20G236700 Glycine max HOM05D001999 ORTHO05D001994 1.2e-06 56.6 50 54.0
MD04G1199600 Malus domestica HOM05D001999 ORTHO05D001994 1.2e-06 56.6 46 58.7
Oeu010920.1 Olea europaea HOM05D001999 ORTHO05D001994 1.2e-06 56.6 46 58.7
TAR633G2461 Trochodendron aralioides HOM05D001999 ORTHO05D001994 1.2e-06 56.6 46 58.7
FAN05G1277 Fragaria x ananassa HOM05D001999 ORTHO05D001994 1.6e-06 56.2 46 56.5
Lsat_1_v5_gn_7_72040 Lactuca sativa HOM05D001999 ORTHO05D001994 1.6e-06 56.2 48 54.2
Lsat_1_v5_gn_8_53500 Lactuca sativa HOM05D001999 ORTHO05D001994 1.6e-06 56.2 46 54.3
Lj9C146G5 Lonicera japonica HOM05D001999 ORTHO05D001994 1.6e-06 56.2 30 80.0
RcHm_v2.0_Chr3g0455821 Rosa chinensis HOM05D001999 ORTHO05D001994 1.6e-06 56.2 46 56.5
TPR.G17700 Trifolium pratense HOM05D001999 ORTHO05D001994 1.6e-06 56.2 66 47.0
TAR362G0062 Trochodendron aralioides HOM05D001999 ORTHO05D001994 1.6e-06 56.2 72 47.2
Migut.N02088 Erythranthe guttata HOM05D001999 ORTHO05D001994 2.1e-06 55.8 46 58.7
Rhsim05G0138600 Rhododendron simsii HOM05D001999 ORTHO05D001994 2.1e-06 55.8 62 50.0
GSVIVG01028007001 Vitis vinifera HOM05D001999 ORTHO05D001994 2.1e-06 55.8 46 56.5
MSTRG.27977 Avicennia marina HOM05D001999 ORTHO05D001994 2.7e-06 55.5 50 54.0
CSS0018606 Camellia sinensis var. sinensis HOM05D001999 ORTHO05D001994 2.7e-06 55.5 46 56.5
CSS0039587 Camellia sinensis var. sinensis HOM05D001999 ORTHO05D001994 2.7e-06 55.5 46 56.5
CSS0046081 Camellia sinensis var. sinensis HOM05D001999 ORTHO05D001994 2.7e-06 55.5 46 58.7
AUR62000756 Chenopodium quinoa HOM05D001999 ORTHO05D001994 2.7e-06 55.5 67 47.8
Duzib128G0926 Durio zibethinus HOM05D001999 ORTHO05D001994 2.7e-06 55.5 84 41.7
ECA236G0210 Erigeron canadensis HOM05D001999 ORTHO05D001994 2.7e-06 55.5 67 46.3
FAN14G1734 Fragaria x ananassa HOM05D001999 ORTHO05D001994 2.7e-06 55.5 44 61.4
Glyma.19G232800 Glycine max HOM05D001999 ORTHO05D001994 2.7e-06 55.5 61 49.2
HanXRQChr04g0118031 Helianthus annuus HOM05D001999 ORTHO05D001994 2.7e-06 55.5 46 54.3
Lj5A391T59 Lonicera japonica HOM05D001999 ORTHO05D001994 2.7e-06 55.5 40 55.0
Lj5A396T57 Lonicera japonica HOM05D001999 ORTHO05D001994 2.7e-06 55.5 40 55.0
Lalb_Chr02g0148101 Lupinus albus HOM05D001999 ORTHO05D001994 2.7e-06 55.5 52 51.9
Lalb_Chr18g0045791 Lupinus albus HOM05D001999 ORTHO05D001994 2.7e-06 55.5 50 52.0
Medtr7g112740 Medicago truncatula HOM05D001999 ORTHO05D001994 2.7e-06 55.5 46 56.5
Nitab4.5_0003844g0010 Nicotiana tabacum HOM05D001999 ORTHO05D001994 2.7e-06 55.5 67 49.3
Phvul.007G197300 Phaseolus vulgaris HOM05D001999 ORTHO05D001994 2.7e-06 55.5 50 54.0
Sc16g0008800 Simmondsia chinensis HOM05D001999 ORTHO05D001994 2.7e-06 55.5 46 56.5
THA.LOC104802795 Tarenaya hassleriana HOM05D001999 ORTHO05D001994 2.7e-06 55.5 76 40.8
Thecc.01G299000 Theobroma cacao HOM05D001999 ORTHO05D001994 2.7e-06 55.5 61 45.9
Thecc.05G313600 Theobroma cacao HOM05D001999 ORTHO05D001994 2.7e-06 55.5 84 44.0
TWI56G0125 Tripterygium wilfordii HOM05D001999 ORTHO05D001994 2.7e-06 55.5 50 54.0
HPP92_028335 Vanilla planifolia HOM05D001999 ORTHO05D001994 2.7e-06 55.5 54 51.9
Actinidia21498 Actinidia chinensis HOM05D001999 ORTHO05D001994 3.5e-06 55.1 46 56.5
BcaC05g30158 Brassica carinata HOM05D001999 ORTHO05D001994 3.5e-06 55.1 67 41.8
CANSAT25G1967 Cannabis sativa HOM05D001999 ORTHO05D001994 3.5e-06 55.1 47 55.3
CANSAT25G3193 Cannabis sativa HOM05D001999 ORTHO05D001994 3.5e-06 55.1 47 55.3
AUR62005212 Chenopodium quinoa HOM05D001999 ORTHO05D001994 3.5e-06 55.1 66 43.9
Glyma.03G235100 Glycine max HOM05D001999 ORTHO05D001994 3.5e-06 55.1 61 49.2
Gorai.007G300400 Gossypium raimondii HOM05D001999 ORTHO05D001994 3.5e-06 55.1 84 41.7
Lalb_Chr06g0167721 Lupinus albus HOM05D001999 ORTHO05D001994 3.5e-06 55.1 56 51.8
MD12G1212400 Malus domestica HOM05D001999 ORTHO05D001994 3.5e-06 55.1 76 40.8
PGR083G1363 Punica granatum HOM05D001999 ORTHO05D001994 3.5e-06 55.1 54 50.0
Rhsim01G0284400 Rhododendron simsii HOM05D001999 ORTHO05D001994 3.5e-06 55.1 45 53.3
CSS0032431 Camellia sinensis var. sinensis HOM05D001999 ORTHO05D001994 4.6e-06 54.7 46 54.3
CiPaw.07G022200 Carya illinoinensis HOM05D001999 ORTHO05D001994 4.6e-06 54.7 46 56.5
Dinv40334 Davidia involucrata HOM05D001999 ORTHO05D001994 4.6e-06 54.7 46 56.5
Duzib138G0033 Durio zibethinus HOM05D001999 ORTHO05D001994 4.6e-06 54.7 59 49.2
FAN09G2669 Fragaria x ananassa HOM05D001999 ORTHO05D001994 4.6e-06 54.7 29 79.3
Gohir.A13G109800 Gossypium hirsutum HOM05D001999 ORTHO05D001994 4.6e-06 54.7 80 41.2
Gohir.D13G112400 Gossypium hirsutum HOM05D001999 ORTHO05D001994 4.6e-06 54.7 80 41.2
Gorai.013G126200 Gossypium raimondii HOM05D001999 ORTHO05D001994 4.6e-06 54.7 80 41.2
SGA_v2.0_scaffold586G53057 Striga asiatica HOM05D001999 ORTHO05D001994 4.6e-06 54.7 59 49.2
unitig_0.g2317 Utricularia gibba HOM05D001999 ORTHO05D001994 4.6e-06 54.7 56 53.6
unitig_52.g17384 Utricularia gibba HOM05D001999 ORTHO05D001994 4.6e-06 54.7 56 53.6
Actinidia24828 Actinidia chinensis HOM05D001999 ORTHO05D001994 6.0e-06 54.3 46 52.2
ClCG03G017310 Citrullus lanatus HOM05D001999 ORTHO05D001994 6.0e-06 54.3 59 47.5
MELO3C015298.2 Cucumis melo HOM05D001999 ORTHO05D001994 6.0e-06 54.3 59 47.5
Lj5g0002371 Lotus japonicus HOM05D001999 ORTHO05D001994 6.0e-06 54.3 76 42.1
Phvul.006G089200 Phaseolus vulgaris HOM05D001999 ORTHO05D001994 6.0e-06 54.3 46 56.5
Atru.chr2.75 Acer truncatum HOM05D001999 ORTHO05D001994 7.8e-06 53.9 52 50.0
A03p34190 Brassica napus HOM05D001999 ORTHO05D001994 7.8e-06 53.9 56 44.6
C03p41580 Brassica napus HOM05D001999 ORTHO05D001994 7.8e-06 53.9 56 44.6
BolC3t16439H Brassica oleracea HOM05D001999 ORTHO05D001994 7.8e-06 53.9 56 44.6
BraA03t12593Z Brassica rapa HOM05D001999 ORTHO05D001994 7.8e-06 53.9 56 44.6
CsaV3_1G038740 Cucumis sativus L. HOM05D001999 ORTHO05D001994 7.8e-06 53.9 71 43.7
DCAR_003361 Daucus carota HOM05D001999 ORTHO05D001994 7.8e-06 53.9 56 53.6
DCAR_022142 Daucus carota HOM05D001999 ORTHO05D001994 7.8e-06 53.9 56 42.9
Gohir.A11G268300 Gossypium hirsutum HOM05D001999 ORTHO05D001994 7.8e-06 53.9 84 41.7
Gohir.D11G278200 Gossypium hirsutum HOM05D001999 ORTHO05D001994 7.8e-06 53.9 84 41.7
Gorai.004G142300 Gossypium raimondii HOM05D001999 ORTHO05D001994 7.8e-06 53.9 47 57.4
Sabra13G0017800 Salix brachista HOM05D001999 ORTHO05D001994 7.8e-06 53.9 29 79.3
Sc06g0004090 Simmondsia chinensis HOM05D001999 ORTHO05D001994 7.8e-06 53.9 59 45.8
TAR365G1043 Trochodendron aralioides HOM05D001999 ORTHO05D001994 7.8e-06 53.9 46 54.3
TAR636G1732 Trochodendron aralioides HOM05D001999 ORTHO05D001994 7.8e-06 53.9 46 54.3
VMungo0540G0393 Vigna mungo HOM05D001999 ORTHO05D001994 7.8e-06 53.9 61 49.2


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