Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p35910 Brassica napus HOM05D000921 ORTHO05D002852 2.7e-121 438.7 228 100.0
BcaC07g40611 Brassica carinata HOM05D000921 ORTHO05D002852 5.6e-111 404.4 209 100.0
C08p35860 Brassica napus HOM05D000921 ORTHO05D002852 5.6e-111 404.4 209 100.0
BolC8t51174H Brassica oleracea HOM05D000921 ORTHO05D002852 7.3e-111 404.1 209 99.5
A09p53140 Brassica napus HOM05D000921 ORTHO05D002852 7.6e-108 394.0 209 97.1
BraA09t40739Z Brassica rapa HOM05D000921 ORTHO05D002852 7.6e-108 394.0 209 97.1
BcaC07g42649 Brassica carinata HOM05D000921 ORTHO05D002852 5.7e-87 324.7 209 85.2
BcaC07g42651 Brassica carinata HOM05D000921 ORTHO05D002852 2.1e-86 322.8 209 83.3
Sp5g02330 Schrenkiella parvula HOM05D000921 ORTHO05D002852 4.8e-78 295.0 230 73.9
A04p01340 Brassica napus HOM05D000921 ORTHO05D002852 6.3e-70 268.1 225 70.7
BraA04t15853Z Brassica rapa HOM05D000921 ORTHO05D002852 8.2e-70 267.7 225 69.8
AL5G43240 Arabidopsis lyrata HOM05D000921 ORTHO05D002852 2.0e-68 263.1 234 66.7
Carub.0005s2767 Capsella rubella HOM05D000921 ORTHO05D002852 7.7e-68 261.2 245 63.7
BcaC02g10197 Brassica carinata HOM05D000921 ORTHO05D002852 1.3e-67 260.4 217 71.4
C04p31670 Brassica napus HOM05D000921 ORTHO05D002852 1.2e-65 253.8 226 68.1
BolC4t24715H Brassica oleracea HOM05D000921 ORTHO05D002852 1.2e-65 253.8 226 68.1
Thhalv10005733m.g Eutrema salsugineum HOM05D000921 ORTHO05D002852 2.7e-65 252.7 287 55.7
THA.LOC104827617 Tarenaya hassleriana HOM05D000921 ORTHO05D002852 1.1e-61 240.7 303 51.2
Carub.0004s2816 Capsella rubella HOM05D000921 ORTHO05D002852 2.0e-60 236.5 300 50.7
CARHR171310 Cardamine hirsuta HOM05D000921 ORTHO05D002852 4.5e-60 235.3 233 59.7
Aa31LG10G15130 Aethionema arabicum HOM05D000921 ORTHO05D002852 4.2e-58 228.8 281 52.7
THA.LOC104801996 Tarenaya hassleriana HOM05D000921 ORTHO05D002852 9.4e-58 227.6 271 53.9
Aa31LG1G27030 Aethionema arabicum HOM05D000921 ORTHO05D002852 1.8e-56 223.4 307 47.9
Thhalv10001277m.g Eutrema salsugineum HOM05D000921 ORTHO05D002852 5.7e-55 218.4 163 71.8
AT2G45540 Arabidopsis thaliana HOM05D000921 ORTHO05D002852 1.7e-54 216.9 163 71.2
AL937U10010 Arabidopsis lyrata HOM05D000921 ORTHO05D002852 2.4e-53 213.0 141 79.4
Sc26g0001150 Simmondsia chinensis HOM05D000921 ORTHO05D002852 5.9e-52 208.4 133 77.4
Cpa.g.sc18.152 Carica papaya HOM05D000921 ORTHO05D002852 1.3e-51 207.2 202 59.4
MD02G1199600 Malus domestica HOM05D000921 ORTHO05D002852 1.7e-51 206.8 211 56.9
CANSAT56G4522 Cannabis sativa HOM05D000921 ORTHO05D002852 2.9e-51 206.1 165 66.7
Atru.chr5.339 Acer truncatum HOM05D000921 ORTHO05D002852 6.5e-51 204.9 175 66.3
COL.COLO4_12586 Corchorus olitorius HOM05D000921 ORTHO05D002852 1.9e-50 203.4 133 78.9
Manes.05G043300 Manihot esculenta HOM05D000921 ORTHO05D002852 1.9e-50 203.4 152 72.4
CiPaw.02G165500 Carya illinoinensis HOM05D000921 ORTHO05D002852 2.5e-50 203.0 231 54.1
CSS0003914 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D002852 4.2e-50 202.2 143 72.7
RcHm_v2.0_Chr1g0351141 Rosa chinensis HOM05D000921 ORTHO05D002852 4.2e-50 202.2 187 61.0
A05p05550 Brassica napus HOM05D000921 ORTHO05D002852 5.5e-50 201.8 145 72.4
Ciclev10024213m.g Citrus clementina HOM05D000921 ORTHO05D002852 5.5e-50 201.8 277 48.4
Prupe.2G149000 Prunus persica HOM05D000921 ORTHO05D002852 5.5e-50 201.8 195 61.0
FAN10G3969 Fragaria x ananassa HOM05D000921 ORTHO05D002852 9.4e-50 201.1 170 65.3
HanXRQChr04g0122231 Helianthus annuus HOM05D000921 ORTHO05D002852 9.4e-50 201.1 133 78.2
Rhsim07G0024100 Rhododendron simsii HOM05D000921 ORTHO05D002852 9.4e-50 201.1 133 75.9
vmacro13368 Vaccinium macrocarpon HOM05D000921 ORTHO05D002852 9.4e-50 201.1 133 75.9
Dinv32396 Davidia involucrata HOM05D000921 ORTHO05D002852 1.2e-49 200.7 133 76.7
Actinidia09569 Actinidia chinensis HOM05D000921 ORTHO05D002852 1.6e-49 200.3 133 75.9
FvH4_7g12350 Fragaria vesca HOM05D000921 ORTHO05D002852 1.6e-49 200.3 186 60.2
FAN06G4917 Fragaria x ananassa HOM05D000921 ORTHO05D002852 1.6e-49 200.3 186 60.2
Oeu029683.1 Olea europaea HOM05D000921 ORTHO05D002852 1.6e-49 200.3 208 56.2
FAN03G0226 Fragaria x ananassa HOM05D000921 ORTHO05D002852 2.1e-49 199.9 170 64.7
FAN10G3046 Fragaria x ananassa HOM05D000921 ORTHO05D002852 2.1e-49 199.9 170 64.7
FAN06G2098 Fragaria x ananassa HOM05D000921 ORTHO05D002852 2.7e-49 199.5 186 59.7
FAN01G1835 Fragaria x ananassa HOM05D000921 ORTHO05D002852 3.6e-49 199.1 186 60.2
Sabra02G0118700 Salix brachista HOM05D000921 ORTHO05D002852 6.1e-49 198.4 232 53.9
arahy.Tifrunner.gnm1.ann1.UYJG1L Arachis hypogaea HOM05D000921 ORTHO05D002852 8.0e-49 198.0 141 72.3
Gohir.D08G042932 Gossypium hirsutum HOM05D000921 ORTHO05D002852 8.0e-49 198.0 148 70.9
Haze_25413 Corylus avellana HOM05D000921 ORTHO05D002852 1.0e-48 197.6 252 48.8
CAN.G1561.16 Capsicum annuum HOM05D000921 ORTHO05D002852 1.4e-48 197.2 160 65.6
arahy.Tifrunner.gnm1.ann1.FVGU3J Arachis hypogaea HOM05D000921 ORTHO05D002852 2.3e-48 196.4 141 71.6
ClCG05G002030 Citrullus lanatus HOM05D000921 ORTHO05D002852 2.3e-48 196.4 133 75.2
Gohir.A08G031900 Gossypium hirsutum HOM05D000921 ORTHO05D002852 2.3e-48 196.4 148 70.3
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 3.0e-48 196.1 133 75.2
BolC4t22272H Brassica oleracea HOM05D000921 ORTHO05D002852 3.0e-48 196.1 133 75.2
Haze_16736 Corylus avellana HOM05D000921 ORTHO05D002852 3.0e-48 196.1 228 52.2
Gorai.004G041500 Gossypium raimondii HOM05D000921 ORTHO05D002852 3.0e-48 196.1 148 70.3
Potri.014G072600 Populus trichocarpa HOM05D000921 ORTHO05D002852 3.0e-48 196.1 135 77.0
QL08p051741 Quercus lobata HOM05D000921 ORTHO05D002852 3.0e-48 196.1 149 69.8
Sed0001143 Sechium edule HOM05D000921 ORTHO05D002852 4.0e-48 195.7 145 71.7
MELO3C006169.2 Cucumis melo HOM05D000921 ORTHO05D002852 5.2e-48 195.3 133 75.2
CsaV3_3G009490 Cucumis sativus L. HOM05D000921 ORTHO05D002852 5.2e-48 195.3 133 75.2
Nitab4.5_0005340g0070 Nicotiana tabacum HOM05D000921 ORTHO05D002852 5.2e-48 195.3 177 62.1
Peaxi162Scf00416g00039 Petunia axillaris HOM05D000921 ORTHO05D002852 5.2e-48 195.3 162 64.8
BraA05t19525Z Brassica rapa HOM05D000921 ORTHO05D002852 6.8e-48 194.9 133 74.4
Potri.002G150000 Populus trichocarpa HOM05D000921 ORTHO05D002852 2.0e-47 193.4 231 54.1
Thecc.01G372900 Theobroma cacao HOM05D000921 ORTHO05D002852 2.0e-47 193.4 210 55.7
Gohir.A11G082900 Gossypium hirsutum HOM05D000921 ORTHO05D002852 2.6e-47 193.0 184 59.8
Sopen01g037870 Solanum pennellii HOM05D000921 ORTHO05D002852 3.4e-47 192.6 171 61.4
ECA236G3038 Erigeron canadensis HOM05D000921 ORTHO05D002852 4.4e-47 192.2 224 51.8
Lsat_1_v5_gn_7_7601 Lactuca sativa HOM05D000921 ORTHO05D002852 5.7e-47 191.8 122 79.5
Lj9A573G74 Lonicera japonica HOM05D000921 ORTHO05D002852 5.7e-47 191.8 133 72.2
Glyma.09G267100 Glycine max HOM05D000921 ORTHO05D002852 7.5e-47 191.4 156 64.1
Lj3g0001885 Lotus japonicus HOM05D000921 ORTHO05D002852 7.5e-47 191.4 146 67.1
TWI14G1087 Tripterygium wilfordii HOM05D000921 ORTHO05D002852 7.5e-47 191.4 134 75.4
Gohir.D11G087000 Gossypium hirsutum HOM05D000921 ORTHO05D002852 9.8e-47 191.0 184 59.2
Gorai.007G092900 Gossypium raimondii HOM05D000921 ORTHO05D002852 9.8e-47 191.0 184 59.2
Lj7C526G8 Lonicera japonica HOM05D000921 ORTHO05D002852 9.8e-47 191.0 130 73.8
Sed0009254 Sechium edule HOM05D000921 ORTHO05D002852 1.3e-46 190.7 146 70.5
Sabra14G0051800 Salix brachista HOM05D000921 ORTHO05D002852 1.7e-46 190.3 151 70.2
TPR.G37773 Trifolium pratense HOM05D000921 ORTHO05D002852 1.7e-46 190.3 199 53.8
Solyc01g094050.1 Solanum lycopersicum HOM05D000921 ORTHO05D002852 2.2e-46 189.9 171 60.8
VMungo1383G3256 Vigna mungo HOM05D000921 ORTHO05D002852 2.2e-46 189.9 151 64.9
Lalb_Chr07g0189591 Lupinus albus HOM05D000921 ORTHO05D002852 2.8e-46 189.5 161 62.1
Glyma.18G223300 Glycine max HOM05D000921 ORTHO05D002852 4.8e-46 188.7 151 65.6
DCAR_025120 Daucus carota HOM05D000921 ORTHO05D002852 6.3e-46 188.3 134 73.1
Ca_07837_v3 Cicer arietinum L. HOM05D000921 ORTHO05D002852 1.1e-45 187.6 215 51.6
Aqoxy7G00539 Aquilegia oxysepala HOM05D000921 ORTHO05D002852 1.8e-45 186.8 140 70.0
Nn1g01159 Nelumbo nucifera HOM05D000921 ORTHO05D002852 1.8e-45 186.8 207 52.7
Nitab4.5_0002436g0070 Nicotiana tabacum HOM05D000921 ORTHO05D002852 1.8e-45 186.8 177 61.0
LjContig00136g0027596 Lotus japonicus HOM05D000921 ORTHO05D002852 2.4e-45 186.4 133 71.4
SGA_v2.0_scaffold303G47875 Striga asiatica HOM05D000921 ORTHO05D002852 2.4e-45 186.4 137 73.0
Phvul.008G074600 Phaseolus vulgaris HOM05D000921 ORTHO05D002852 3.1e-45 186.0 224 48.2
Medtr7g075660 Medicago truncatula HOM05D000921 ORTHO05D002852 4.1e-45 185.7 224 50.0
Lalb_Chr01g0021281 Lupinus albus HOM05D000921 ORTHO05D002852 7.0e-45 184.9 139 67.6
PSO478G4503 Papaver somniferum HOM05D000921 ORTHO05D002852 7.0e-45 184.9 133 71.4
PSO782G1119 Papaver somniferum HOM05D000921 ORTHO05D002852 7.0e-45 184.9 133 71.4
Ca_23823_v3 Cicer arietinum L. HOM05D000921 ORTHO05D002852 9.1e-45 184.5 133 70.7
Ca_23828_v3 Cicer arietinum L. HOM05D000921 ORTHO05D002852 9.1e-45 184.5 133 70.7
Gohir.D08G149700 Gossypium hirsutum HOM05D000921 ORTHO05D002852 9.1e-45 184.5 156 62.8
Psat4g150320 Pisum sativum HOM05D000921 ORTHO05D002852 2.0e-44 183.3 133 70.7
Medtr8g035750 Medicago truncatula HOM05D000921 ORTHO05D002852 2.7e-44 183.0 142 66.2
Gorai.004G155500 Gossypium raimondii HOM05D000921 ORTHO05D002852 3.5e-44 182.6 156 62.2
AL4G44720 Arabidopsis lyrata HOM05D000921 ORTHO05D002852 1.0e-43 181.0 257 45.9
Phvul.010G049000 Phaseolus vulgaris HOM05D000921 ORTHO05D002852 1.7e-43 180.3 135 70.4
TPR.G28298 Trifolium pratense HOM05D000921 ORTHO05D002852 1.7e-43 180.3 135 68.1
Migut.F01430 Erythranthe guttata HOM05D000921 ORTHO05D002852 2.9e-43 179.5 210 53.8
VMungo0331G0475 Vigna mungo HOM05D000921 ORTHO05D002852 5.0e-43 178.7 135 70.4
Nn6g34350 Nelumbo nucifera HOM05D000921 ORTHO05D002852 8.5e-43 177.9 197 53.8
Glyma.03G021400 Glycine max HOM05D000921 ORTHO05D002852 1.9e-42 176.8 161 62.1
SHI13503 Sapria himalayana HOM05D000921 ORTHO05D002852 1.9e-42 176.8 150 64.7
AUR62013602 Chenopodium quinoa HOM05D000921 ORTHO05D002852 3.2e-42 176.0 227 49.3
AUR62004245 Chenopodium quinoa HOM05D000921 ORTHO05D002852 5.5e-42 175.3 227 49.3
DCAR_006882 Daucus carota HOM05D000921 ORTHO05D002852 1.8e-40 170.2 156 60.3
Sc02g0002400 Simmondsia chinensis HOM05D000921 ORTHO05D002852 4.0e-40 169.1 208 51.4
EL10Ac1g00924 Beta vulgaris HOM05D000921 ORTHO05D002852 5.2e-40 168.7 130 69.2
TAR629G2419 Trochodendron aralioides HOM05D000921 ORTHO05D002852 1.2e-39 167.5 183 55.2
TAR629G0908 Trochodendron aralioides HOM05D000921 ORTHO05D002852 1.5e-39 167.2 183 55.2
MBI12_g38016_MAGBIO Magnolia biondii HOM05D000921 ORTHO05D002852 4.9e-38 162.2 185 51.9
ECA240G3430 Erigeron canadensis HOM05D000921 ORTHO05D002852 1.1e-37 161.0 142 56.3
Lsat_1_v5_gn_3_135480 Lactuca sativa HOM05D000921 ORTHO05D002852 1.8e-37 160.2 143 58.7
Oeu003495.3 Olea europaea HOM05D000921 ORTHO05D002852 1.8e-37 160.2 108 76.9
HanXRQChr03g0093641 Helianthus annuus HOM05D000921 ORTHO05D002852 7.0e-37 158.3 144 59.0
MBI04_g43159_MAGBIO Magnolia biondii HOM05D000921 ORTHO05D002852 1.2e-36 157.5 213 45.5
CDE11G1134 Ceratophyllum demersum HOM05D000921 ORTHO05D002852 7.7e-36 154.8 140 60.7
Psat3g104040 Pisum sativum HOM05D000921 ORTHO05D002852 3.0e-32 142.9 231 42.4
Actinidia31441 Actinidia chinensis HOM05D000921 ORTHO05D002852 5.2e-32 142.1 98 71.4
ATR0757G054 Amborella trichopoda HOM05D000921 ORTHO05D002852 6.8e-32 141.7 179 46.4
unitig_22.g5372 Utricularia gibba HOM05D000921 ORTHO05D002852 8.3e-30 134.8 197 45.2
HPP92_009978 Vanilla planifolia HOM05D000921 ORTHO05D002852 2.0e-28 130.2 207 42.5
SMO347G0262 Selaginella moellendorffii HOM05D000921 ORTHO05D002852 6.8e-24 115.2 139 46.8
Pp3c25_6190 Physcomitrium patens HOM05D000921 ORTHO05D002852 2.0e-23 113.6 128 46.9
HPP92_003358 Vanilla planifolia HOM05D000921 ORTHO05D002852 3.4e-23 112.8 149 46.3
SEGI_07876 Sequoiadendron giganteum HOM05D000921 ORTHO05D002852 1.3e-22 110.9 139 42.4
Pp3c16_14330 Physcomitrium patens HOM05D000921 ORTHO05D002852 4.9e-22 109.0 134 44.8
Dinv43732 Davidia involucrata HOM05D000921 ORTHO05D002852 2.4e-21 106.7 68 80.9
Mapoly0056s0137 Marchantia polymorpha HOM05D000921 ORTHO05D002852 1.6e-20 104.0 135 42.2
Pp3c8_11180 Physcomitrium patens HOM05D000921 ORTHO05D002852 9.5e-18 94.7 129 44.2
AagrBONN_evm.TU.Sc2ySwM_117.767 Anthoceros agrestis HOM05D000921 ORTHO05D002852 2.8e-17 93.2 145 40.0
Os02g0663300 Oryza sativa ssp. japonica HOM05D000921 ORTHO05D002852 5.2e-16 89.0 146 42.5
Zm00001eb249850 Zea mays HOM05D000921 ORTHO05D002852 1.4e-13 80.9 162 34.0
Zm00001eb074430 Zea mays HOM05D000921 ORTHO05D002852 1.0e-11 74.7 111 44.1
CBR_g26195 Chara braunii HOM05D000921 ORTHO05D002852 3.0e-11 73.2 149 37.6


User provided reference genes

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