Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p33130 Brassica napus HOM05D002493 ORTHO05D024191 5.4e-44 180.6 94 100.0
C02p17070 Brassica napus HOM05D002493 ORTHO05D024191 6.9e-39 163.7 103 87.4
BolC5t32682H Brassica oleracea HOM05D002493 ORTHO05D024191 2.9e-37 158.3 113 78.8
BolC2t07805H Brassica oleracea HOM05D002493 ORTHO05D024191 8.4e-37 156.8 113 78.8
BcaC07g40365 Brassica carinata HOM05D017174 ORTHO05D032218 1.1e-23 113.2 99 68.7
BcaNung00554 Brassica carinata HOM05D028134 ORTHO05D024191 5.8e-22 107.5 99 66.7
BcaNung00556 Brassica carinata HOM05D000089 ORTHO05D002844 2.5e-12 75.5 44 90.9
BcaB05g21730 Brassica carinata HOM05D002493 ORTHO05D003175 6.7e-10 67.4 44 79.5
A10p31030 Brassica napus HOM05D002493 ORTHO05D003175 4.3e-09 64.7 64 59.4
BraA10t45148Z Brassica rapa HOM05D002493 ORTHO05D003175 4.3e-09 64.7 64 59.4
BcaC06g32223 Brassica carinata HOM05D002493 ORTHO05D003175 9.7e-09 63.5 62 61.3
Sp6g37700 Schrenkiella parvula HOM05D002493 ORTHO05D003175 1.7e-08 62.8 62 61.3
BcaB01g05724 Brassica carinata HOM05D002493 ORTHO05D003175 2.2e-08 62.4 64 54.7
Thhalv10013510m.g Eutrema salsugineum HOM05D002493 ORTHO05D003175 2.2e-08 62.4 62 59.7
C09p71560 Brassica napus HOM05D002493 ORTHO05D003175 2.8e-08 62.0 44 75.0
BolC9t59917H Brassica oleracea HOM05D002493 ORTHO05D003175 2.8e-08 62.0 44 75.0
BraA03t09582Z Brassica rapa HOM05D002493 ORTHO05D003175 4.8e-08 61.2 64 56.2
A03p02180 Brassica napus HOM05D002493 ORTHO05D003175 1.4e-07 59.7 61 57.4
CARHR208120 Cardamine hirsuta HOM05D002493 ORTHO05D003175 1.4e-07 59.7 42 73.8
AT5G05140 Arabidopsis thaliana HOM05D002493 ORTHO05D003175 2.4e-07 58.9 64 54.7
AL6G14970 Arabidopsis lyrata HOM05D002493 ORTHO05D003175 3.1e-07 58.5 64 54.7
Carub.0006s0407 Capsella rubella HOM05D002493 ORTHO05D003175 5.3e-07 57.8 62 56.5
BcaC03g13147 Brassica carinata HOM05D002493 ORTHO05D003175 9.1e-07 57.0 44 63.6
C02p02180 Brassica napus HOM05D002493 ORTHO05D003175 9.1e-07 57.0 44 63.6
BolC2t06187H Brassica oleracea HOM05D002493 ORTHO05D003175 9.1e-07 57.0 44 63.6
BraA02t04834Z Brassica rapa HOM05D002493 ORTHO05D003175 2.6e-06 55.5 44 61.4
BcaC07g38577 Brassica carinata HOM05D001015 ORTHO05D000881 3.4e-06 55.1 27 96.3
BcaC07g38614 Brassica carinata HOM05D001015 ORTHO05D000881 3.4e-06 55.1 27 96.3
A08p33870 Brassica napus HOM05D001015 ORTHO05D000881 3.4e-06 55.1 27 96.3
C08p13830 Brassica napus HOM05D001015 ORTHO05D000881 3.4e-06 55.1 27 96.3
BolC8t49018H Brassica oleracea HOM05D001015 ORTHO05D000881 3.4e-06 55.1 27 96.3
Sp1g09270 Schrenkiella parvula HOM05D001015 ORTHO05D000881 5.9e-06 54.3 32 78.1


User provided reference genes

Program Settings