Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p15950 Brassica napus HOM05D000003 ORTHO05D009772 1.2e-115 419.9 207 100.0
BolC6t38377H Brassica oleracea HOM05D000003 ORTHO05D009772 1.3e-90 336.7 169 95.3
BcaC01g02466 Brassica carinata HOM05D000003 ORTHO05D009772 1.2e-32 144.1 153 48.4
BolC7t43567H Brassica oleracea HOM05D000003 ORTHO05D009772 5.8e-30 135.2 143 53.1
BraA01t02856Z Brassica rapa HOM05D000003 ORTHO05D009772 3.7e-29 132.5 143 48.3
BcaC03g15462 Brassica carinata HOM05D000003 ORTHO05D009772 4.1e-28 129.0 141 48.2
C02p17900 Brassica napus HOM05D000003 ORTHO05D009772 1.3e-26 124.0 161 45.3
BolC2t07921H Brassica oleracea HOM05D000003 ORTHO05D009772 1.3e-26 124.0 161 45.3
BcaB02g10745 Brassica carinata HOM05D000003 ORTHO05D009772 3.9e-26 122.5 152 42.1
BcaB08g35992 Brassica carinata HOM05D000003 ORTHO05D009772 8.6e-26 121.3 156 41.7
BcaNung00257 Brassica carinata HOM05D000003 ORTHO05D021580 2.5e-25 119.8 159 40.3
Aa31LG4G19050 Aethionema arabicum HOM05D000003 ORTHO05D009772 9.5e-25 117.9 144 41.7
BcaB04g18525 Brassica carinata HOM05D000003 ORTHO05D009772 9.5e-25 117.9 155 41.9
BcaB04g18526 Brassica carinata HOM05D000003 ORTHO05D009772 9.5e-25 117.9 155 41.9
BcaB02g06876 Brassica carinata HOM05D000003 ORTHO05D009772 3.6e-24 115.9 92 56.5
AL2G12670 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 6.2e-24 115.2 162 42.0
Aa31LG11G5950 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.8e-23 113.6 144 42.4
Aa31LG2G17780 Aethionema arabicum HOM05D000003 ORTHO05D009772 2.3e-23 113.2 142 40.8
Aa31LG1G13000 Aethionema arabicum HOM05D000003 ORTHO05D009772 3.1e-23 112.8 144 41.0
AL8G21850 Arabidopsis lyrata HOM05D000328 ORTHO05D000191 6.8e-23 111.7 159 40.9
BcaC03g15572 Brassica carinata HOM05D000003 ORTHO05D009772 2.0e-22 110.2 94 54.3
BcaB07g32374 Brassica carinata HOM05D000003 ORTHO05D009772 2.6e-22 109.8 115 50.4
Aa31csc275G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.4e-22 109.4 146 39.0
Aa31sc256G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.4e-22 109.4 160 36.2
Aa31LG9G4050 Aethionema arabicum HOM05D000003 ORTHO05D009772 5.8e-22 108.6 155 34.8
BcaC04g20002 Brassica carinata HOM05D000003 ORTHO05D009772 8.3e-21 104.8 143 40.6
Aa31LG3G5620 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.4e-20 104.0 142 39.4
Aa31LG8G11510 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.9e-20 103.6 142 36.6
Aa31sc200G60 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.9e-20 103.6 159 36.5
Aa31sc77G40 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.9e-20 103.6 168 36.9
BolC3t16094H Brassica oleracea HOM05D000003 ORTHO05D016458 4.1e-20 102.4 152 38.2
Aa31sc118G40 Aethionema arabicum HOM05D000003 ORTHO05D009772 7.1e-20 101.7 155 36.8
BcaC07g42246 Brassica carinata HOM05D014135 ORTHO05D016458 9.2e-20 101.3 121 43.8
BolC4t28430H Brassica oleracea HOM05D000003 ORTHO05D009772 1.2e-19 100.9 152 37.5
AL3G45380 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 2.1e-19 100.1 143 38.5
Aa31LG8G16480 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.7e-19 99.8 153 34.6
Aa31LG10G7630 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.6e-19 99.0 164 35.4
BcaC06g34333 Brassica carinata HOM05D000003 ORTHO05D009772 6.0e-19 98.6 83 61.4
Aa31LG7G12380 Aethionema arabicum HOM05D000003 ORTHO05D009772 7.8e-19 98.2 144 37.5
Aa31sc62G10 Aethionema arabicum HOM05D000003 ORTHO05D009772 7.8e-19 98.2 159 36.5
Aa31LG7G3330 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.3e-18 97.4 159 35.8
Aa31sc210G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.3e-18 96.7 146 37.0
Aa31LG7G9420 Aethionema arabicum HOM05D000003 ORTHO05D009772 3.0e-18 96.3 152 36.2
AL2G19440 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 3.0e-18 96.3 142 40.1
Aa31LG1G5430 Aethionema arabicum HOM05D000003 ORTHO05D009772 3.9e-18 95.9 155 33.5
Aa31LG7G3480 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.9e-18 95.9 148 35.8
Aa31sc17G250 Aethionema arabicum HOM05D000003 ORTHO05D009772 5.1e-18 95.5 125 40.8
Aa31sc466G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.6e-18 95.1 157 36.3
Aa31LG2G15460 Aethionema arabicum HOM05D000003 ORTHO05D000411 1.1e-17 94.4 145 35.2
Sp6g13220 Schrenkiella parvula HOM05D000003 ORTHO05D000006 1.1e-17 94.4 150 39.3
Aa31LG9G5230 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.5e-17 94.0 142 34.5
C02p54310 Brassica napus HOM05D000003 ORTHO05D009772 1.9e-17 93.6 148 39.2
Aa31LG11G4790 Aethionema arabicum HOM05D000003 ORTHO05D009772 2.5e-17 93.2 156 34.0
Aa31LG4G11770 Aethionema arabicum HOM05D000003 ORTHO05D009772 3.3e-17 92.8 144 39.6
Aa31sc314G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.3e-17 92.8 154 31.8
Aa31LG5G23430 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.3e-17 92.4 142 38.7
Aa31sc360G50 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.3e-17 92.4 146 37.0
Aa31LG2G6440 Aethionema arabicum HOM05D000003 ORTHO05D009772 5.6e-17 92.0 126 34.9
Sp2g02790 Schrenkiella parvula HOM05D000003 ORTHO05D009772 5.6e-17 92.0 142 33.1
Aa31LG10G9400 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.3e-17 91.7 148 37.2
AL2G10570 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 9.5e-17 91.3 144 37.5
C02p14790 Brassica napus HOM05D000003 ORTHO05D009772 1.2e-16 90.9 157 35.0
BolC2t07608H Brassica oleracea HOM05D000003 ORTHO05D009772 1.2e-16 90.9 157 35.0
BcaB04g20717 Brassica carinata HOM05D000003 ORTHO05D009772 1.6e-16 90.5 151 39.1
BolC9t57066H Brassica oleracea HOM05D000003 ORTHO05D009772 1.6e-16 90.5 147 36.7
Aa31LG1G2520 Aethionema arabicum HOM05D000003 ORTHO05D009772 2.1e-16 90.1 135 37.0
Aa31LG6G11540 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.2e-16 88.6 147 32.7
Aa31LG11G6710 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.8e-15 87.0 154 32.5
Aa31LG7G12700 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.8e-15 87.0 145 34.5
Aa31LG1G4840 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.4e-15 86.7 145 35.2
C09p19850 Brassica napus HOM05D000003 ORTHO05D009772 2.4e-15 86.7 145 37.9
Aa31LG7G1610 Aethionema arabicum HOM05D000003 ORTHO05D009772 5.2e-15 85.5 146 34.2
AT5G33330 Arabidopsis thaliana HOM05D000003 ORTHO05D009772 6.8e-15 85.1 155 34.2
A01p14050 Brassica napus HOM05D000485 ORTHO05D000341 6.8e-15 85.1 151 32.5
BolC9t54890H Brassica oleracea HOM05D000003 ORTHO05D009772 1.2e-14 84.3 144 37.5
C09p41800 Brassica napus HOM05D000003 ORTHO05D009772 3.4e-14 82.8 143 35.7
Aa31LG5G23610 Aethionema arabicum HOM05D000003 ORTHO05D000411 4.4e-14 82.4 163 30.7
Aa31sc369G20 Aethionema arabicum HOM05D000003 ORTHO05D009772 5.8e-14 82.0 171 30.4
Aa31LG2G16390 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.6e-14 81.6 163 30.7
Aa31LG2G16890 Aethionema arabicum HOM05D000003 ORTHO05D009772 7.6e-14 81.6 147 34.7
AL3G45450 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 1.3e-13 80.9 140 35.0
Aa31sc411G40 Aethionema arabicum HOM05D005064 ORTHO05D006611 1.7e-13 80.5 164 32.3
AT3G60040 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.7e-13 80.5 145 35.2
Aa31LG10G2340 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-13 80.1 160 30.0
Aa31LG1G1440 Aethionema arabicum HOM05D000003 ORTHO05D009772 2.2e-13 80.1 130 33.1
BcaB07g33905 Brassica carinata HOM05D014135 ORTHO05D016458 2.9e-13 79.7 84 46.4
Sp1g33730 Schrenkiella parvula HOM05D000003 ORTHO05D009772 2.9e-13 79.7 120 35.0
Aa31LG3G4270 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.8e-13 79.3 145 32.4
AL3G29100 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 3.8e-13 79.3 122 38.5
C07p06100 Brassica napus HOM05D000003 ORTHO05D000004 3.8e-13 79.3 143 35.0
Aa31LG11G7720 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.9e-13 79.0 145 31.0
BolC7t41023H Brassica oleracea HOM05D000003 ORTHO05D000004 8.4e-13 78.2 143 34.3
BolC7t44732H Brassica oleracea HOM05D000003 ORTHO05D009772 1.1e-12 77.8 88 43.2
BcaB03g15420 Brassica carinata HOM05D000003 ORTHO05D009772 1.4e-12 77.4 113 40.7
C05p29390 Brassica napus HOM05D000003 ORTHO05D009772 1.4e-12 77.4 129 34.9
BolC5t31671H Brassica oleracea HOM05D000003 ORTHO05D009772 1.4e-12 77.4 129 34.9
Aa31sc404G30 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.9e-12 77.0 89 43.8
AL6G40320 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 1.9e-12 77.0 138 36.2
Thhalv10009928m.g Eutrema salsugineum HOM05D000003 ORTHO05D009772 5.4e-12 75.5 143 31.5
BcaC08g46521 Brassica carinata HOM05D000003 ORTHO05D009772 7.1e-12 75.1 67 53.7
BcaB01g02217 Brassica carinata HOM05D000003 ORTHO05D009772 9.2e-12 74.7 131 35.9
AL8G19200 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 3.5e-11 72.8 141 32.6
Aa31sc25G150 Aethionema arabicum HOM05D000003 ORTHO05D009772 7.8e-11 71.6 73 47.9
Aa31sc730G50 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.7e-10 70.5 165 29.7
C05p36970 Brassica napus HOM05D001224 ORTHO05D024276 3.0e-10 69.7 67 49.3
BolC3t16279H Brassica oleracea HOM05D000003 ORTHO05D009772 5.1e-10 68.9 72 44.4
Sp4g07090 Schrenkiella parvula HOM05D000003 ORTHO05D009772 6.6e-10 68.6 134 32.1
Aa31LG8G11280 Aethionema arabicum HOM05D000003 ORTHO05D000006 8.7e-10 68.2 114 34.2
Sp7g09380 Schrenkiella parvula HOM05D000003 ORTHO05D009772 1.5e-09 67.4 93 36.6
Sp2g15540 Schrenkiella parvula HOM05D000003 ORTHO05D009772 2.5e-09 66.6 112 36.6
BcaB06g27632 Brassica carinata HOM05D000003 ORTHO05D009772 7.3e-09 65.1 96 36.5
BolC6t37992H Brassica oleracea HOM05D010756 ORTHO05D000925 1.6e-08 63.9 131 30.5
Sp6g06150 Schrenkiella parvula HOM05D000003 ORTHO05D009772 2.1e-08 63.5 80 42.5
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-08 62.8 150 28.0
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 8.1e-08 61.6 130 27.7
AL251U10020 Arabidopsis lyrata HOM05D011429 ORTHO05D000925 1.4e-07 60.8 129 30.2
BcaC01g06146 Brassica carinata HOM05D001239 ORTHO05D000925 1.4e-07 60.8 135 24.4
BcaB04g19833 Brassica carinata HOM05D001239 ORTHO05D000925 1.8e-07 60.5 151 29.8
BcaC02g10929 Brassica carinata HOM05D000459 ORTHO05D000798 1.8e-07 60.5 53 54.7
BcaC09g51831 Brassica carinata HOM05D001239 ORTHO05D000925 1.8e-07 60.5 128 30.5
Thhalv10001198m.g Eutrema salsugineum HOM05D000003 ORTHO05D009772 1.8e-07 60.5 138 31.2
AL3G32130 Arabidopsis lyrata HOM05D011429 ORTHO05D000925 2.4e-07 60.1 142 28.9
BraA02t08675Z Brassica rapa HOM05D001239 ORTHO05D000925 2.4e-07 60.1 131 29.8
Sp3g31100 Schrenkiella parvula HOM05D001869 ORTHO05D371790 2.4e-07 60.1 115 30.4
BcaNung02294 Brassica carinata HOM05D001239 ORTHO05D000925 3.1e-07 59.7 139 30.9
A01p17340 Brassica napus HOM05D000003 ORTHO05D021580 9.0e-07 58.2 85 37.6
BcaB07g32430 Brassica carinata HOM05D001239 ORTHO05D000925 1.2e-06 57.8 93 35.5
BcaC01g05560 Brassica carinata HOM05D001239 ORTHO05D000925 1.5e-06 57.4 129 31.0
Aa31sc128G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.6e-06 56.6 84 33.3
Aa31sc248G50 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.6e-06 56.6 84 33.3
BcaB06g27275 Brassica carinata HOM05D001239 ORTHO05D000925 2.6e-06 56.6 126 31.0
BcaC04g19170 Brassica carinata HOM05D001239 ORTHO05D000925 2.6e-06 56.6 145 22.8
BolC2t09268H Brassica oleracea HOM05D001239 ORTHO05D000925 2.6e-06 56.6 139 28.1
BolC4t25971H Brassica oleracea HOM05D001239 ORTHO05D000925 3.4e-06 56.2 142 26.8
BolC5t34840H Brassica oleracea HOM05D001239 ORTHO05D000925 3.4e-06 56.2 129 26.4
Sp6g38460 Schrenkiella parvula HOM05D000003 ORTHO05D009772 3.4e-06 56.2 68 42.6
BcaC03g15550 Brassica carinata HOM05D001239 ORTHO05D000925 4.4e-06 55.8 139 27.3
BolC4t21932H Brassica oleracea HOM05D001239 ORTHO05D000925 4.4e-06 55.8 147 29.3
Aa31LG11G9070 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.8e-06 55.5 114 32.5
Aa31LG9G9420 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.8e-06 55.5 84 32.1
Sp7g08400 Schrenkiella parvula HOM05D000003 ORTHO05D009772 5.8e-06 55.5 83 38.6
BolC4t26780H Brassica oleracea HOM05D001239 ORTHO05D000925 7.6e-06 55.1 148 27.7
BcaB06g28514 Brassica carinata HOM05D001239 ORTHO05D000925 9.9e-06 54.7 133 28.6
BcaC03g15774 Brassica carinata HOM05D001239 ORTHO05D000925 9.9e-06 54.7 129 29.5


User provided reference genes

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