Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p10480 Brassica napus HOM05D001239 ORTHO05D000925 2.8e-19 97.8 57 100.0
C03p35560 Brassica napus HOM05D001239 ORTHO05D000925 1.4e-18 95.5 57 98.2
C07p26790 Brassica napus HOM05D001239 ORTHO05D000925 2.0e-17 91.7 57 93.0
BolC7t43208H Brassica oleracea HOM05D001239 ORTHO05D000925 2.0e-17 91.7 57 93.0
BraA01t00376Z Brassica rapa HOM05D001239 ORTHO05D000925 3.8e-16 87.4 57 87.7
BolC1t00889H Brassica oleracea HOM05D001239 ORTHO05D000925 1.4e-15 85.5 57 86.0
BolC6t36113H Brassica oleracea HOM05D001239 ORTHO05D000925 2.1e-14 81.6 57 80.7
C06p10370 Brassica napus HOM05D001239 ORTHO05D000925 3.9e-13 77.4 57 77.2
BcaC05g25993 Brassica carinata HOM05D000003 ORTHO05D000006 1.3e-11 72.4 56 75.0
C05p19460 Brassica napus HOM05D001239 ORTHO05D000925 1.3e-11 72.4 56 75.0
BraA03t11474Z Brassica rapa HOM05D001239 ORTHO05D024661 2.9e-08 61.2 42 81.0
BraA04t16685Z Brassica rapa HOM05D001239 ORTHO05D024661 8.5e-08 59.7 42 78.6
A06p41350 Brassica napus HOM05D008478 ORTHO05D000925 1.2e-06 55.8 56 58.9
BraA07t27837Z Brassica rapa HOM05D000003 ORTHO05D000004 1.2e-06 55.8 56 58.9
BolC8t52815H Brassica oleracea HOM05D001239 ORTHO05D000925 1.6e-06 55.5 56 58.9
BolC9t53787H Brassica oleracea HOM05D001239 ORTHO05D024661 2.7e-06 54.7 41 73.2
BolC9t58145H Brassica oleracea HOM05D001239 ORTHO05D000925 2.7e-06 54.7 56 60.7
BolC9t58964H Brassica oleracea HOM05D008478 ORTHO05D000925 4.7e-06 53.9 56 58.9
C06p13710 Brassica napus HOM05D001239 ORTHO05D024661 6.1e-06 53.5 41 70.7
BolC7t45952H Brassica oleracea HOM05D008478 ORTHO05D000925 6.1e-06 53.5 56 57.1
BcaC02g09573 Brassica carinata HOM05D001239 ORTHO05D000925 7.9e-06 53.1 56 57.1
BolC4t26004H Brassica oleracea HOM05D008478 ORTHO05D000925 7.9e-06 53.1 56 57.1
BolC6t36543H Brassica oleracea HOM05D001239 ORTHO05D024661 7.9e-06 53.1 38 76.3
Thhalv10019721m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 7.9e-06 53.1 56 55.4


User provided reference genes

Program Settings