Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p07270 Brassica napus HOM05D001239 ORTHO05D000925 7.0e-41 170.2 89 100.0
BolC8t47569H Brassica oleracea HOM05D001239 ORTHO05D000925 7.0e-41 170.2 89 100.0
BolC3t14565H Brassica oleracea HOM05D001239 ORTHO05D000925 5.9e-40 167.2 89 97.8
BolC8t51260H Brassica oleracea HOM05D001239 ORTHO05D000925 5.2e-36 154.1 82 98.8
BcaB07g33890 Brassica carinata HOM05D001239 ORTHO05D000925 5.9e-24 114.0 87 65.5
BraA08t35548Z Brassica rapa HOM05D001239 ORTHO05D000925 2.2e-23 112.1 89 69.7
BraA09t37618Z Brassica rapa HOM05D001239 ORTHO05D000925 1.9e-22 109.0 86 66.3
BolC6t39317H Brassica oleracea HOM05D001239 ORTHO05D000925 5.7e-19 97.4 84 61.9
BolC2t05983H Brassica oleracea HOM05D001239 ORTHO05D000925 3.8e-15 84.7 76 59.2
BolC5t33152H Brassica oleracea HOM05D001239 ORTHO05D000925 7.2e-14 80.5 82 54.9
BraA08t34484Z Brassica rapa HOM05D008653 ORTHO05D000925 1.2e-11 73.2 87 47.1
BraA08t32764Z Brassica rapa HOM05D012699 ORTHO05D000925 3.4e-11 71.6 85 48.2
Sp1g01750 Schrenkiella parvula HOM05D001239 ORTHO05D000925 5.7e-11 70.9 81 48.1
BcaC01g02035 Brassica carinata HOM05D001239 ORTHO05D000925 9.8e-11 70.1 87 47.1
Sp7g01630 Schrenkiella parvula HOM05D001239 ORTHO05D000925 9.8e-11 70.1 84 47.6
BolC6t35664H Brassica oleracea HOM05D008653 ORTHO05D000925 1.3e-10 69.7 87 44.8
BraA04t18944Z Brassica rapa HOM05D008653 ORTHO05D000925 1.3e-10 69.7 87 43.7
BcaB03g13732 Brassica carinata HOM05D012699 ORTHO05D016706 1.7e-10 69.3 81 48.1
A08p33830 Brassica napus HOM05D001239 ORTHO05D000925 1.7e-10 69.3 82 47.6
CARHR034640 Cardamine hirsuta HOM05D001239 ORTHO05D000925 1.7e-10 69.3 82 50.0
BolC4t27637H Brassica oleracea HOM05D000003 ORTHO05D000925 2.2e-10 68.9 82 45.1
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 2.8e-10 68.6 84 41.7
BNapus_Darmor_BZH_scaffold_229p00140 Brassica napus HOM05D001239 ORTHO05D000925 2.8e-10 68.6 87 41.4
BolC2t12256H Brassica oleracea HOM05D012699 ORTHO05D000925 4.9e-10 67.8 83 44.6
BolC9t58220H Brassica oleracea HOM05D008653 ORTHO05D000925 6.3e-10 67.4 87 42.5
BcaC03g17500 Brassica carinata HOM05D001239 ORTHO05D000925 1.4e-09 66.2 82 46.3
BolC6t38835H Brassica oleracea HOM05D001239 ORTHO05D000925 1.8e-09 65.9 85 42.4
BraA06t24059Z Brassica rapa HOM05D001239 ORTHO05D000925 1.8e-09 65.9 88 43.2
AL8G23160 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 3.1e-09 65.1 82 42.7
BcaNung04285 Brassica carinata HOM05D001239 ORTHO05D000925 3.1e-09 65.1 82 46.3
BraA03t13572Z Brassica rapa HOM05D008653 ORTHO05D000925 3.1e-09 65.1 88 42.0
BraA03t15429Z Brassica rapa HOM05D001239 ORTHO05D000925 3.1e-09 65.1 84 46.4
C03p34180 Brassica napus HOM05D001239 ORTHO05D000925 4.1e-09 64.7 72 47.2
BcaC02g10812 Brassica carinata HOM05D012699 ORTHO05D016706 7.0e-09 63.9 79 45.6
BraA07t29530Z Brassica rapa HOM05D001239 ORTHO05D000925 7.0e-09 63.9 87 40.2
BolC1t00761H Brassica oleracea HOM05D008653 ORTHO05D000925 9.2e-09 63.5 87 40.2
AL3G32130 Arabidopsis lyrata HOM05D011429 ORTHO05D000925 1.2e-08 63.2 86 44.2
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-08 63.2 87 40.2
BcaC08g43073 Brassica carinata HOM05D001239 ORTHO05D000925 1.2e-08 63.2 66 54.5
BcaC09g51021 Brassica carinata HOM05D000022 ORTHO05D000071 1.2e-08 63.2 82 42.7
Thhalv10023927m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 1.2e-08 63.2 87 41.4
BcaB04g18173 Brassica carinata HOM05D001239 ORTHO05D000925 1.6e-08 62.8 87 41.4
BcaC08g46847 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-08 62.8 87 40.2
C03p52090 Brassica napus HOM05D001239 ORTHO05D000925 1.6e-08 62.8 87 40.2
BolC3t17489H Brassica oleracea HOM05D001239 ORTHO05D000925 1.6e-08 62.8 87 40.2
BolC4t23673H Brassica oleracea HOM05D001239 ORTHO05D000925 1.6e-08 62.8 87 40.2
BolC5t31412H Brassica oleracea HOM05D012699 ORTHO05D016706 1.6e-08 62.8 82 45.1
BolC7t42161H Brassica oleracea HOM05D008653 ORTHO05D000925 2.0e-08 62.4 87 39.1
Thhalv10028180m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 2.0e-08 62.4 81 43.2
AL5G21470 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 2.7e-08 62.0 82 39.0
BcaC06g34152 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-08 62.0 87 40.2
BraA09t38022Z Brassica rapa HOM05D001239 ORTHO05D000925 2.7e-08 62.0 87 41.4
BcaC05g28546 Brassica carinata HOM05D000003 ORTHO05D000006 4.5e-08 61.2 87 41.4
C06p00890 Brassica napus HOM05D001239 ORTHO05D000925 4.5e-08 61.2 87 37.9
Thhalv10005465m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 5.9e-08 60.8 84 38.1
Sp4g05790 Schrenkiella parvula HOM05D001239 ORTHO05D000925 5.9e-08 60.8 86 41.9
BcaC03g17316 Brassica carinata HOM05D001239 ORTHO05D000925 7.8e-08 60.5 72 43.1
C06p10980 Brassica napus HOM05D001239 ORTHO05D000925 7.8e-08 60.5 83 41.0
C09p67320 Brassica napus HOM05D000042 ORTHO05D003657 7.8e-08 60.5 86 41.9
BolC8t48117H Brassica oleracea HOM05D001239 ORTHO05D000925 7.8e-08 60.5 81 42.0
AL5G14390 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 1.0e-07 60.1 82 39.0
AT4G09490 Arabidopsis thaliana HOM05D001239 ORTHO05D000925 1.0e-07 60.1 82 39.0
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 1.0e-07 60.1 87 36.8
BcaC05g25993 Brassica carinata HOM05D000003 ORTHO05D000006 1.3e-07 59.7 92 46.7
C05p19460 Brassica napus HOM05D001239 ORTHO05D000925 1.3e-07 59.7 92 46.7
BcaC03g15116 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-07 59.3 87 41.4
BcaNung03545 Brassica carinata HOM05D001239 ORTHO05D000925 1.7e-07 59.3 84 40.5
BolC5t31581H Brassica oleracea HOM05D005404 ORTHO05D006623 1.7e-07 59.3 82 40.2
BraA08t32647Z Brassica rapa HOM05D001239 ORTHO05D000925 1.7e-07 59.3 86 38.4
C03p25430 Brassica napus HOM05D008653 ORTHO05D012633 2.3e-07 58.9 82 40.2
BolC5t29135H Brassica oleracea HOM05D001239 ORTHO05D000925 2.3e-07 58.9 65 49.2
Thhalv10017605m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 2.3e-07 58.9 84 39.3
BolC5t33856H Brassica oleracea HOM05D001239 ORTHO05D000925 2.9e-07 58.5 83 41.0
BolC9t59496H Brassica oleracea HOM05D000042 ORTHO05D003657 2.9e-07 58.5 86 40.7
BcaB08g34848 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-07 58.2 86 41.9
BolC9t56299H Brassica oleracea HOM05D001239 ORTHO05D000925 3.9e-07 58.2 86 38.4
BraA02t06066Z Brassica rapa HOM05D001239 ORTHO05D000925 3.9e-07 58.2 86 41.9
BraA04t18055Z Brassica rapa HOM05D008653 ORTHO05D000925 3.9e-07 58.2 69 40.6
AL1G62100 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 5.0e-07 57.8 82 46.3
BolC9t55688H Brassica oleracea HOM05D001239 ORTHO05D000925 5.0e-07 57.8 87 36.8
BraA08t32778Z Brassica rapa HOM05D001239 ORTHO05D000925 5.0e-07 57.8 81 43.2
BcaB03g15427 Brassica carinata HOM05D001239 ORTHO05D000925 6.6e-07 57.4 88 40.9
BcaC01g01483 Brassica carinata HOM05D001239 ORTHO05D000925 6.6e-07 57.4 82 39.0
BolC6t38967H Brassica oleracea HOM05D001239 ORTHO05D000925 6.6e-07 57.4 86 45.3
BraA03t11474Z Brassica rapa HOM05D001239 ORTHO05D024661 6.6e-07 57.4 72 44.4
BraA04t16685Z Brassica rapa HOM05D001239 ORTHO05D024661 6.6e-07 57.4 72 44.4
BraA04t17503Z Brassica rapa HOM05D001239 ORTHO05D000925 6.6e-07 57.4 82 40.2
CARHR160220 Cardamine hirsuta HOM05D001239 ORTHO05D000925 6.6e-07 57.4 80 45.0
A02p15660 Brassica napus HOM05D008478 ORTHO05D000925 8.6e-07 57.0 88 39.8
BolC2t09268H Brassica oleracea HOM05D001239 ORTHO05D000925 8.6e-07 57.0 86 41.9
BolC6t35759H Brassica oleracea HOM05D010756 ORTHO05D000925 8.6e-07 57.0 82 39.0
BolC6t37894H Brassica oleracea HOM05D035248 ORTHO05D000925 8.6e-07 57.0 87 34.5
BraA01t00376Z Brassica rapa HOM05D001239 ORTHO05D000925 8.6e-07 57.0 81 40.7
BraA02t06627Z Brassica rapa HOM05D008478 ORTHO05D000925 8.6e-07 57.0 88 40.9
Thhalv10001854m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 8.6e-07 57.0 81 40.7
Thhalv10023022m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 8.6e-07 57.0 84 39.3
BcaC02g09573 Brassica carinata HOM05D001239 ORTHO05D000925 1.1e-06 56.6 88 40.9
BolC4t26004H Brassica oleracea HOM05D008478 ORTHO05D000925 1.1e-06 56.6 88 40.9
C06p13710 Brassica napus HOM05D001239 ORTHO05D024661 1.5e-06 56.2 79 45.6
BraA06t26944Z Brassica rapa HOM05D008653 ORTHO05D000925 1.5e-06 56.2 87 34.5
CARHR055780 Cardamine hirsuta HOM05D001239 ORTHO05D000925 1.5e-06 56.2 82 41.5
CARHR217600 Cardamine hirsuta HOM05D001239 ORTHO05D000925 1.5e-06 56.2 82 39.0
BcaB01g05133 Brassica carinata HOM05D000003 ORTHO05D000925 1.9e-06 55.8 82 40.2
BcaB08g34667 Brassica carinata HOM05D000441 ORTHO05D017554 1.9e-06 55.8 73 39.7
BcaC01g00118 Brassica carinata HOM05D001239 ORTHO05D000925 1.9e-06 55.8 82 40.2
BcaC05g27689 Brassica carinata HOM05D001239 ORTHO05D000925 1.9e-06 55.8 87 42.5
A03p59740 Brassica napus HOM05D001239 ORTHO05D000925 1.9e-06 55.8 83 41.0
BolC6t36543H Brassica oleracea HOM05D001239 ORTHO05D024661 1.9e-06 55.8 79 45.6
BolC8t50916H Brassica oleracea HOM05D001239 ORTHO05D000925 1.9e-06 55.8 87 35.6
BolC9t58889H Brassica oleracea HOM05D001239 ORTHO05D000925 1.9e-06 55.8 85 41.2
BraA02t06467Z Brassica rapa HOM05D001239 ORTHO05D000925 1.9e-06 55.8 82 40.2
BolC6t35885H Brassica oleracea HOM05D001239 ORTHO05D000925 2.5e-06 55.5 83 39.8
Thhalv10003490m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 2.5e-06 55.5 83 34.9
C06p09750 Brassica napus HOM05D001239 ORTHO05D000925 3.3e-06 55.1 81 37.0
C07p26790 Brassica napus HOM05D001239 ORTHO05D000925 3.3e-06 55.1 84 38.1
CARHR153540 Cardamine hirsuta HOM05D001239 ORTHO05D000925 3.3e-06 55.1 87 39.1
Thhalv10011157m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 3.3e-06 55.1 84 38.1
BcaC03g15550 Brassica carinata HOM05D001239 ORTHO05D000925 4.3e-06 54.7 86 40.7
BraA03t13628Z Brassica rapa HOM05D001239 ORTHO05D000925 4.3e-06 54.7 83 39.8
BcaC08g46180 Brassica carinata HOM05D001239 ORTHO05D008139 5.6e-06 54.3 78 39.7
C02p10910 Brassica napus HOM05D010911 ORTHO05D041405 5.6e-06 54.3 87 36.8
C07p36130 Brassica napus HOM05D001239 ORTHO05D000925 5.6e-06 54.3 82 39.0
BolC3t19592H Brassica oleracea HOM05D001239 ORTHO05D000925 5.6e-06 54.3 83 39.8
BolC7t43208H Brassica oleracea HOM05D001239 ORTHO05D000925 5.6e-06 54.3 84 36.9
BolC9t53787H Brassica oleracea HOM05D001239 ORTHO05D024661 5.6e-06 54.3 79 45.6
BolC9t58964H Brassica oleracea HOM05D008478 ORTHO05D000925 5.6e-06 54.3 88 39.8
BraA07t28335Z Brassica rapa HOM05D001239 ORTHO05D000925 5.6e-06 54.3 88 42.0
BcaB02g09878 Brassica carinata HOM05D000496 ORTHO05D000411 7.3e-06 53.9 85 38.8
C06p10370 Brassica napus HOM05D001239 ORTHO05D000925 7.3e-06 53.9 85 40.0
BolC2t11040H Brassica oleracea HOM05D001239 ORTHO05D000925 7.3e-06 53.9 86 39.5
BolC5t29933H Brassica oleracea HOM05D001239 ORTHO05D000925 7.3e-06 53.9 75 41.3
BolC6t38044H Brassica oleracea HOM05D001239 ORTHO05D000925 7.3e-06 53.9 80 37.5
BolC9t54410H Brassica oleracea HOM05D001239 ORTHO05D000925 7.3e-06 53.9 87 37.9
BolC9t58145H Brassica oleracea HOM05D001239 ORTHO05D000925 7.3e-06 53.9 82 41.5
BraA08t34149Z Brassica rapa HOM05D001239 ORTHO05D000925 7.3e-06 53.9 82 39.0
Thhalv10003494m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 7.3e-06 53.9 82 42.7
Thhalv10024129m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 7.3e-06 53.9 79 35.4
BcaB04g18040 Brassica carinata HOM05D001239 ORTHO05D000925 9.5e-06 53.5 85 42.4
BcaB04g19606 Brassica carinata HOM05D001239 ORTHO05D000925 9.5e-06 53.5 83 36.1
BcaC08g47031 Brassica carinata HOM05D001239 ORTHO05D000925 9.5e-06 53.5 84 40.5
C06p08080 Brassica napus HOM05D001239 ORTHO05D000925 9.5e-06 53.5 86 38.4
BolC7t42937H Brassica oleracea HOM05D001239 ORTHO05D000925 9.5e-06 53.5 87 36.8


User provided reference genes

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