Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p07070 Brassica napus HOM05D001239 ORTHO05D024427 3.7e-143 511.5 260 100.0
BolC2t08478H Brassica oleracea HOM05D001239 ORTHO05D024427 1.8e-105 386.3 238 85.3
BolC8t47551H Brassica oleracea HOM05D001239 ORTHO05D024427 5.1e-84 315.1 163 99.4
BraA04t17766Z Brassica rapa HOM05D001239 ORTHO05D024427 2.1e-61 240.0 165 80.6
BcaC04g19167 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-58 230.7 205 61.5
BcaB07g32141 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-56 223.4 215 56.7
BcaB01g02634 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-52 210.3 235 52.3
C05p11830 Brassica napus HOM05D001239 ORTHO05D033080 1.3e-50 204.1 193 58.0
BcaC04g22862 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-50 203.8 195 56.9
BcaC06g36045 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-50 203.0 388 39.9
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 9.1e-41 171.4 202 49.0
BolC8t49935H Brassica oleracea HOM05D001239 ORTHO05D011709 2.2e-39 166.8 212 50.0
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 4.7e-37 159.1 248 42.7
BolC7t40747H Brassica oleracea HOM05D001239 ORTHO05D027739 5.9e-32 142.1 210 45.2
BcaC06g34669 Brassica carinata HOM05D001239 ORTHO05D024427 5.5e-30 135.6 86 80.2
BcaC05g25304 Brassica carinata HOM05D000508 ORTHO05D000371 7.2e-30 135.2 147 57.1
BcaC01g02173 Brassica carinata HOM05D001239 ORTHO05D017499 2.1e-29 133.7 344 31.7
C03p67910 Brassica napus HOM05D001239 ORTHO05D017499 1.8e-28 130.6 189 43.4
C07p03520 Brassica napus HOM05D001239 ORTHO05D027739 6.8e-28 128.6 268 36.6
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 2.2e-26 123.6 254 37.4
C02p30330 Brassica napus HOM05D001239 ORTHO05D027739 8.3e-18 95.1 133 42.9
BcaC01g03871 Brassica carinata HOM05D001239 ORTHO05D011709 4.1e-17 92.8 207 38.2
C09p42620 Brassica napus HOM05D001239 ORTHO05D011709 2.0e-16 90.5 203 36.0
BcaC07g40131 Brassica carinata HOM05D014076 ORTHO05D000006 1.0e-15 88.2 182 38.5
BcaC09g49677 Brassica carinata HOM05D000496 ORTHO05D011709 3.9e-15 86.3 191 34.0
BcaB03g15929 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-14 82.8 185 31.4
BolC6t37073H Brassica oleracea HOM05D001239 ORTHO05D017499 4.3e-14 82.8 222 33.3
BolC1t05632H Brassica oleracea HOM05D014076 ORTHO05D021903 1.6e-13 80.9 182 35.7
BolC5t30244H Brassica oleracea HOM05D001239 ORTHO05D011709 1.6e-13 80.9 203 33.5
BolC4t26715H Brassica oleracea HOM05D001239 ORTHO05D011709 2.8e-13 80.1 202 32.7
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 4.7e-13 79.3 188 37.2
BraA03t12194Z Brassica rapa HOM05D009238 ORTHO05D012489 4.7e-13 79.3 216 32.4
BcaC01g01482 Brassica carinata HOM05D009238 ORTHO05D021611 1.1e-12 78.2 192 33.3
BcaC02g11658 Brassica carinata HOM05D014076 ORTHO05D021903 1.1e-12 78.2 213 35.7
BraA09t38239Z Brassica rapa HOM05D014076 ORTHO05D021903 1.1e-12 78.2 182 34.6
C09p49690 Brassica napus HOM05D001239 ORTHO05D011709 1.4e-12 77.8 142 39.4
BcaC02g09195 Brassica carinata HOM05D001239 ORTHO05D031919 6.8e-12 75.5 103 42.7
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-11 74.3 215 30.7
BcaB07g33550 Brassica carinata HOM05D001239 ORTHO05D011709 2.6e-11 73.6 91 51.6
C01p30110 Brassica napus HOM05D001239 ORTHO05D023908 3.4e-11 73.2 81 56.8
BcaB05g23728 Brassica carinata HOM05D009238 ORTHO05D012489 4.4e-11 72.8 188 28.7
BcaB03g11924 Brassica carinata HOM05D001239 ORTHO05D011709 7.5e-11 72.0 91 48.4
C06p18600 Brassica napus HOM05D001239 ORTHO05D017499 1.3e-10 71.2 199 34.2
BcaC05g27311 Brassica carinata HOM05D001239 ORTHO05D011709 1.7e-10 70.9 194 29.9
A01p18960 Brassica napus HOM05D014076 ORTHO05D021903 2.2e-10 70.5 211 32.2
BcaB04g17452 Brassica carinata HOM05D009238 ORTHO05D019868 2.9e-10 70.1 186 32.3
C03p49160 Brassica napus HOM05D014076 ORTHO05D024532 3.7e-10 69.7 210 29.5
BraA01t01837Z Brassica rapa HOM05D014076 ORTHO05D021903 3.7e-10 69.7 212 32.1
BcaC03g16856 Brassica carinata HOM05D009238 ORTHO05D019868 1.4e-09 67.8 177 30.5
BcaC07g39368 Brassica carinata HOM05D009238 ORTHO05D012489 1.9e-09 67.4 199 27.6
BcaB08g36396 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-09 66.6 150 36.7
BraA06t25448Z Brassica rapa HOM05D001239 ORTHO05D017499 3.2e-09 66.6 93 48.4
BraA09t38523Z Brassica rapa HOM05D027742 ORTHO05D027054 3.2e-09 66.6 107 40.2
BcaC08g45061 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-09 65.9 166 37.3
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 5.4e-09 65.9 228 28.9
BcaC08g44422 Brassica carinata HOM05D001239 ORTHO05D017499 7.0e-09 65.5 152 37.5
C06p11850 Brassica napus HOM05D009238 ORTHO05D012489 7.0e-09 65.5 193 27.5
C03p47070 Brassica napus HOM05D016815 ORTHO05D020093 1.2e-08 64.7 197 28.4
BolC3t17197H Brassica oleracea HOM05D014076 ORTHO05D024532 1.2e-08 64.7 100 41.0
BolC5t29932H Brassica oleracea HOM05D001239 ORTHO05D033080 2.7e-08 63.5 56 66.1
BraA04t16367Z Brassica rapa HOM05D009238 ORTHO05D012489 3.5e-08 63.2 191 33.5
C02p57570 Brassica napus HOM05D001239 ORTHO05D011709 4.6e-08 62.8 140 36.4
C07p05770 Brassica napus HOM05D001239 ORTHO05D011709 4.6e-08 62.8 45 66.7
C04p52150 Brassica napus HOM05D027742 ORTHO05D027054 6.0e-08 62.4 105 40.0
BraA02t08674Z Brassica rapa HOM05D009238 ORTHO05D012489 6.0e-08 62.4 193 26.9
BcaB04g18066 Brassica carinata HOM05D001239 ORTHO05D023908 7.8e-08 62.0 87 43.7
A04p06620 Brassica napus HOM05D009238 ORTHO05D012489 7.8e-08 62.0 196 32.7
C01p34040 Brassica napus HOM05D001239 ORTHO05D011709 7.8e-08 62.0 70 51.4
C03p49130 Brassica napus HOM05D014076 ORTHO05D024532 7.8e-08 62.0 217 30.9
C06p15150 Brassica napus HOM05D016815 ORTHO05D020093 7.8e-08 62.0 257 26.1
BolC6t36689H Brassica oleracea HOM05D016815 ORTHO05D020093 7.8e-08 62.0 257 26.1
BcaC06g33741 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-07 61.2 186 29.0
BcaB05g23185 Brassica carinata HOM05D001239 ORTHO05D023908 1.7e-07 60.8 150 31.3
BcaC01g00485 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-07 60.8 176 33.0
BolC2t08494H Brassica oleracea HOM05D009238 ORTHO05D012489 2.3e-07 60.5 126 33.3
BcaC02g12033 Brassica carinata HOM05D001239 ORTHO05D011709 5.0e-07 59.3 125 36.0
BcaC01g05559 Brassica carinata HOM05D001239 ORTHO05D011709 6.6e-07 58.9 208 29.3
A06p35270 Brassica napus HOM05D000591 ORTHO05D000579 8.6e-07 58.5 93 44.1
BolC6t35474H Brassica oleracea HOM05D016295 ORTHO05D017554 1.1e-06 58.2 188 27.1
C04p30980 Brassica napus HOM05D001035 ORTHO05D021752 1.5e-06 57.8 124 41.1
A10p16820 Brassica napus HOM05D016815 ORTHO05D012489 1.9e-06 57.4 197 27.4
BolC9t59809H Brassica oleracea HOM05D016815 ORTHO05D012489 1.9e-06 57.4 191 28.8
BolC1t02956H Brassica oleracea HOM05D001239 ORTHO05D023908 3.3e-06 56.6 56 60.7
BcaB07g33722 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-06 56.2 51 54.9
C03p87880 Brassica napus HOM05D001239 ORTHO05D033080 4.3e-06 56.2 55 60.0
BcaC03g14187 Brassica carinata HOM05D001239 ORTHO05D011709 5.6e-06 55.8 65 49.2


User provided reference genes

Program Settings