Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p06560 Brassica napus HOM05D009142 ORTHO05D017515 1.6e-70 269.2 130 100.0
C03p69660 Brassica napus HOM05D009142 ORTHO05D017515 4.0e-61 238.0 127 90.6
BolC3t19224H Brassica oleracea HOM05D009142 ORTHO05D017515 4.0e-61 238.0 127 90.6
C02p23170 Brassica napus HOM05D009142 ORTHO05D017515 1.7e-59 232.6 127 89.8
C01p32780 Brassica napus HOM05D009142 ORTHO05D017515 2.8e-59 231.9 127 89.8
BcaC07g37235 Brassica carinata HOM05D009142 ORTHO05D090351 8.9e-53 210.3 109 95.4
C09p28950 Brassica napus HOM05D009142 ORTHO05D097323 2.2e-51 205.7 163 68.1
BolC2t08459H Brassica oleracea HOM05D009142 ORTHO05D106632 2.7e-49 198.7 106 92.5
BcaC01g02001 Brassica carinata HOM05D009142 ORTHO05D017515 3.5e-49 198.4 106 92.5
BcaC01g01996 Brassica carinata HOM05D009142 ORTHO05D017515 4.5e-49 198.0 106 92.5
C03p69730 Brassica napus HOM05D009142 ORTHO05D017515 2.9e-48 195.3 106 91.5
BolC9t55760H Brassica oleracea HOM05D009142 ORTHO05D017515 1.9e-47 192.6 111 88.3
BolC3t19232H Brassica oleracea HOM05D009142 ORTHO05D106603 3.3e-47 191.8 111 88.3
BcaC04g21679 Brassica carinata HOM05D009142 ORTHO05D090460 1.2e-46 189.9 109 88.1
BcaC09g49802 Brassica carinata HOM05D009142 ORTHO05D091049 1.9e-34 149.4 113 71.7
C01p28360 Brassica napus HOM05D009142 ORTHO05D040187 2.1e-33 146.0 174 55.2
C04p24200 Brassica napus HOM05D009142 ORTHO05D097994 1.5e-31 139.8 76 90.8
BolC1t02765H Brassica oleracea HOM05D009142 ORTHO05D040187 4.3e-31 138.3 161 55.9
BcaC09g50894 Brassica carinata HOM05D009142 ORTHO05D095404 5.6e-23 111.3 91 70.3
BolC1t01877H Brassica oleracea HOM05D009142 ORTHO05D105623 1.8e-21 106.3 127 48.8
C03p63110 Brassica napus HOM05D009142 ORTHO05D101793 8.7e-16 87.4 80 68.8
BcaC06g33515 Brassica carinata HOM05D009142 ORTHO05D027516 3.4e-12 75.5 76 61.8
C07p48260 Brassica napus HOM05D009142 ORTHO05D027516 3.4e-12 75.5 76 61.8
BcaC06g32973 Brassica carinata HOM05D003261 ORTHO05D004230 1.3e-11 73.6 48 79.2
BcaC06g33437 Brassica carinata HOM05D003261 ORTHO05D004230 2.2e-11 72.8 48 79.2
C07p47500 Brassica napus HOM05D003261 ORTHO05D004230 2.2e-11 72.8 48 79.2
BolC7t45277H Brassica oleracea HOM05D003261 ORTHO05D004230 2.2e-11 72.8 48 79.2
BraA03t14046Z Brassica rapa HOM05D003261 ORTHO05D004230 8.4e-11 70.9 48 77.1
BcaC01g02590 Brassica carinata HOM05D012155 ORTHO05D021780 1.4e-10 70.1 41 87.8
A03p49450 Brassica napus HOM05D003261 ORTHO05D004230 1.9e-10 69.7 48 77.1
Carub.0007s2576 Capsella rubella HOM05D003261 ORTHO05D004230 7.1e-10 67.8 48 72.9
Thhalv10025068m.g Eutrema salsugineum HOM05D003261 ORTHO05D004230 7.1e-10 67.8 48 72.9
Sp7g14310 Schrenkiella parvula HOM05D002510 ORTHO05D007210 1.2e-09 67.0 48 75.0
SpUn1161_0010 Schrenkiella parvula HOM05D003261 ORTHO05D027516 1.2e-09 67.0 48 75.0
AL7G39370 Arabidopsis lyrata HOM05D003261 ORTHO05D004230 2.7e-09 65.9 48 72.9
CARHR290440 Cardamine hirsuta HOM05D003261 ORTHO05D004230 3.5e-09 65.5 48 72.9
C01p19490 Brassica napus HOM05D009142 ORTHO05D041610 4.6e-09 65.1 34 91.2
BcaC07g37407 Brassica carinata HOM05D009142 ORTHO05D032415 3.0e-08 62.4 37 89.2
C08p08840 Brassica napus HOM05D009142 ORTHO05D032415 3.0e-08 62.4 37 89.2
BolC8t47730H Brassica oleracea HOM05D009142 ORTHO05D032415 3.0e-08 62.4 37 89.2
Aa31LG10G6240 Aethionema arabicum HOM05D003261 ORTHO05D004230 3.3e-07 58.9 48 66.7
AT4G15900 Arabidopsis thaliana HOM05D003261 ORTHO05D004230 3.3e-07 58.9 49 69.4
BcaNung00239 Brassica carinata HOM05D003261 ORTHO05D004230 7.3e-07 57.8 48 66.7
BolC8t47502H Brassica oleracea HOM05D009142 ORTHO05D041800 4.8e-06 55.1 26 80.8


User provided reference genes

Program Settings