Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p05940 Brassica napus HOM05D001038 ORTHO05D024385 6.9e-133 477.2 232 100.0
C07p09720 Brassica napus HOM05D001038 ORTHO05D010763 1.4e-117 426.4 232 89.2
BolC7t41410H Brassica oleracea HOM05D001038 ORTHO05D010763 4.5e-116 421.4 232 88.4
C07p12170 Brassica napus HOM05D001038 ORTHO05D010763 1.1e-109 400.2 220 90.5
BolC2t11143H Brassica oleracea HOM05D001038 ORTHO05D024385 2.0e-108 396.0 220 90.0
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-106 390.2 220 89.1
BolC7t41684H Brassica oleracea HOM05D001038 ORTHO05D010763 2.1e-105 386.0 232 83.6
C07p12200 Brassica napus HOM05D001038 ORTHO05D010763 1.2e-55 220.7 142 80.3
BolC9t55517H Brassica oleracea HOM05D001038 ORTHO05D024385 1.6e-52 210.3 120 90.0
BolC6t38915H Brassica oleracea HOM05D001038 ORTHO05D033066 2.3e-51 206.5 104 97.1
C09p26150 Brassica napus HOM05D001038 ORTHO05D042508 1.1e-50 204.1 104 96.2
C06p38180 Brassica napus HOM05D001038 ORTHO05D000395 3.1e-48 196.1 104 93.3
A06p22310 Brassica napus HOM05D001038 ORTHO05D033066 3.4e-47 192.6 104 91.3
BraA06t25315Z Brassica rapa HOM05D001038 ORTHO05D033066 3.5e-44 182.6 99 90.9
BolC8t47413H Brassica oleracea HOM05D001038 ORTHO05D024385 6.9e-40 168.3 83 98.8
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-37 160.2 235 37.9
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-36 157.5 235 37.4
BraA02t08689Z Brassica rapa HOM05D001038 ORTHO05D010763 1.2e-36 157.5 197 44.2
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 1.8e-35 153.7 239 37.2
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 3.9e-35 152.5 236 36.0
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 3.3e-34 149.4 238 41.2
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-33 146.7 226 38.9
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 6.2e-33 145.2 232 37.1
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-32 144.1 230 36.5
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-32 143.3 232 37.1
BcaC06g35484 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-32 143.3 235 33.2
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 3.1e-32 142.9 232 36.6
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 4.0e-32 142.5 235 34.9
BraA01t02230Z Brassica rapa HOM05D001038 ORTHO05D000395 4.0e-32 142.5 230 36.5
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 6.9e-32 141.7 234 35.5
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 9.0e-32 141.4 230 37.4
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 9.0e-32 141.4 230 37.4
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-31 140.6 239 33.1
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 7.6e-31 138.3 216 38.0
BcaB05g24425 Brassica carinata HOM05D001038 ORTHO05D024385 6.5e-30 135.2 101 68.3
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 6.5e-30 135.2 233 35.6
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 1.4e-29 134.0 228 37.3
BcaB06g26737 Brassica carinata HOM05D001038 ORTHO05D010763 1.9e-29 133.7 231 34.6
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 4.2e-29 132.5 202 36.6
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 5.5e-29 132.1 228 37.3
C09p39680 Brassica napus HOM05D001038 ORTHO05D010763 5.5e-29 132.1 234 35.9
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 7.1e-29 131.7 230 36.5
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 9.3e-29 131.3 202 36.6
BraA04t17267Z Brassica rapa HOM05D001038 ORTHO05D014932 1.2e-28 131.0 230 37.8
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 2.7e-28 129.8 232 35.3
BolC7t41626H Brassica oleracea HOM05D001038 ORTHO05D014932 2.7e-28 129.8 228 37.3
BraA06t25412Z Brassica rapa HOM05D001038 ORTHO05D017560 4.6e-28 129.0 231 35.1
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 1.0e-27 127.9 232 34.5
BcaNung01360 Brassica carinata HOM05D001038 ORTHO05D010763 1.0e-27 127.9 232 35.8
BcaB07g33328 Brassica carinata HOM05D001038 ORTHO05D010763 1.8e-27 127.1 232 35.8
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 2.3e-27 126.7 227 35.7
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-27 126.7 224 38.4
BcaB06g28131 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-27 126.3 227 34.4
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 3.0e-27 126.3 226 35.0
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 3.0e-27 126.3 226 35.0
BcaB04g17277 Brassica carinata HOM05D001038 ORTHO05D014932 6.7e-27 125.2 230 35.7
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 1.1e-26 124.4 185 36.2
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 2.5e-26 123.2 234 35.5
BcaB03g16620 Brassica carinata HOM05D001038 ORTHO05D000395 5.7e-26 122.1 172 41.3
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 7.4e-26 121.7 234 32.9
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 7.4e-26 121.7 205 35.1
C05p37200 Brassica napus HOM05D001038 ORTHO05D017560 1.3e-25 120.9 227 35.7
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 3.7e-25 119.4 226 32.7
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 8.2e-25 118.2 231 32.5
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 8.2e-25 118.2 231 32.5
BcaC08g44172 Brassica carinata HOM05D001038 ORTHO05D018589 3.1e-24 116.3 224 32.1
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 1.5e-23 114.0 226 34.1
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 2.6e-23 113.2 226 34.1
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.0e-22 111.3 229 34.5
C07p18280 Brassica napus HOM05D001038 ORTHO05D000395 3.8e-22 109.4 54 98.1
BolC7t42338H Brassica oleracea HOM05D001038 ORTHO05D000395 3.8e-22 109.4 54 98.1
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 6.5e-22 108.6 235 29.8
C07p30940 Brassica napus HOM05D001038 ORTHO05D014932 2.5e-21 106.7 153 36.6
C07p18290 Brassica napus HOM05D001038 ORTHO05D010763 4.2e-21 105.9 47 95.7
BolC7t42339H Brassica oleracea HOM05D001038 ORTHO05D010763 4.2e-21 105.9 47 95.7
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 5.5e-21 105.5 213 32.9
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 9.4e-21 104.8 156 39.7
BcaNung04782 Brassica carinata HOM05D001038 ORTHO05D014932 2.1e-20 103.6 219 34.2
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 6.1e-20 102.1 229 31.4
BcaB01g01825 Brassica carinata HOM05D001038 ORTHO05D000395 7.9e-20 101.7 194 30.9
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 7.9e-20 101.7 227 32.2
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 7.9e-20 101.7 188 36.7
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-19 99.8 199 30.2
BcaB02g10814 Brassica carinata HOM05D001038 ORTHO05D010946 3.9e-19 99.4 190 34.7
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 6.7e-19 98.6 229 32.8
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-18 97.8 228 28.5
BraA06t25316Z Brassica rapa HOM05D001038 ORTHO05D010763 1.9e-18 97.1 47 87.2
C09p12400 Brassica napus HOM05D001038 ORTHO05D019962 3.3e-18 96.3 232 32.3
BcaB01g01303 Brassica carinata HOM05D001038 ORTHO05D000395 4.3e-18 95.9 248 30.2
BcaB06g26982 Brassica carinata HOM05D001038 ORTHO05D000395 3.7e-17 92.8 197 30.5
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 3.7e-17 92.8 220 32.3
Thhalv10002771m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.1e-16 91.3 206 30.6
BcaB03g16061 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-16 90.5 225 29.3
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-16 90.1 236 28.8
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 4.1e-16 89.4 145 37.2
BraA07t28076Z Brassica rapa HOM05D001038 ORTHO05D028293 4.1e-16 89.4 134 38.1
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 5.3e-16 89.0 164 32.3
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 5.3e-16 89.0 164 32.3
Thhalv10002173m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 5.3e-16 89.0 210 30.5
A05p27890 Brassica napus HOM05D005627 ORTHO05D028293 6.9e-16 88.6 133 37.6
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 9.1e-16 88.2 122 38.5
BraA06t25336Z Brassica rapa HOM05D001038 ORTHO05D028293 9.1e-16 88.2 134 38.1
BcaB08g35416 Brassica carinata HOM05D001038 ORTHO05D017560 1.2e-15 87.8 192 33.3
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 4.5e-15 85.9 132 40.2
BcaC08g45228 Brassica carinata HOM05D001038 ORTHO05D010946 1.0e-14 84.7 224 30.8
Thhalv10023964m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 5.0e-14 82.4 224 31.7
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 6.5e-14 82.0 228 28.1
Thhalv10003372m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 8.5e-14 81.6 231 32.5
Thhalv10029129m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 8.5e-14 81.6 226 29.6
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 2.5e-13 80.1 134 34.3
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 2.5e-13 80.1 231 27.7
A10p07430 Brassica napus HOM05D001038 ORTHO05D042212 3.2e-13 79.7 95 45.3
Thhalv10023140m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 3.2e-13 79.7 194 28.4
BolC4t26248H Brassica oleracea HOM05D001038 ORTHO05D018589 4.2e-13 79.3 222 26.6
C01p21870 Brassica napus HOM05D001038 ORTHO05D041007 5.5e-13 79.0 137 34.3
BolC1t02113H Brassica oleracea HOM05D001038 ORTHO05D041007 5.5e-13 79.0 137 34.3
BcaC01g03622 Brassica carinata HOM05D001038 ORTHO05D016776 9.4e-13 78.2 140 32.9
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 9.4e-13 78.2 231 26.4
BraSC36t46060Z Brassica rapa HOM05D005627 ORTHO05D042212 1.2e-12 77.8 89 46.1
AT2G07240 Arabidopsis thaliana HOM05D001038 ORTHO05D010763 1.6e-12 77.4 197 31.0
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 3.6e-12 76.3 97 41.2
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 3.6e-12 76.3 97 41.2
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 4.7e-12 75.9 153 33.3
C05p38700 Brassica napus HOM05D037879 ORTHO05D027353 7.9e-12 75.1 229 26.2
BraA08t32953Z Brassica rapa HOM05D001038 ORTHO05D014932 1.0e-11 74.7 107 42.1
BraA06t25408Z Brassica rapa HOM05D001038 ORTHO05D010763 1.4e-11 74.3 35 85.7
BcaB08g36369 Brassica carinata HOM05D001038 ORTHO05D014932 2.3e-11 73.6 137 34.3
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 3.9e-11 72.8 160 33.1
BcaC03g14544 Brassica carinata HOM05D001038 ORTHO05D010946 8.8e-11 71.6 227 30.8
BolC9t57089H Brassica oleracea HOM05D001038 ORTHO05D021947 8.8e-11 71.6 108 37.0
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 1.5e-10 70.9 132 33.3
C01p21260 Brassica napus HOM05D001038 ORTHO05D000395 2.6e-10 70.1 99 41.4
Thhalv10003408m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 2.6e-10 70.1 117 35.0
BolC5t31712H Brassica oleracea HOM05D001038 ORTHO05D032287 3.3e-10 69.7 226 26.5
Thhalv10009967m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 3.3e-10 69.7 231 29.4
A06p10190 Brassica napus HOM05D001038 ORTHO05D014932 4.4e-10 69.3 137 35.8
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 4.4e-10 69.3 104 36.5
BcaC04g20563 Brassica carinata HOM05D001038 ORTHO05D021947 7.4e-10 68.6 108 36.1
C06p06920 Brassica napus HOM05D001038 ORTHO05D000395 7.4e-10 68.6 80 46.2
BcaB06g28199 Brassica carinata HOM05D001038 ORTHO05D010946 1.3e-09 67.8 241 26.1
BcaC07g39263 Brassica carinata HOM05D001038 ORTHO05D016776 1.3e-09 67.8 123 32.5
BcaB04g19629 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-09 67.0 130 37.7
BolC2t08169H Brassica oleracea HOM05D001038 ORTHO05D010946 2.2e-09 67.0 120 33.3
BcaB01g01614 Brassica carinata HOM05D001038 ORTHO05D014932 2.8e-09 66.6 190 30.5
C02p24050 Brassica napus HOM05D001038 ORTHO05D000395 2.8e-09 66.6 105 40.0
C04p58380 Brassica napus HOM05D001038 ORTHO05D010763 2.8e-09 66.6 74 40.5
Carub.0004s1123 Capsella rubella HOM05D001038 ORTHO05D000395 2.8e-09 66.6 142 31.7
A05p28250 Brassica napus HOM05D001038 ORTHO05D019929 4.8e-09 65.9 124 29.8
BraA05t21706Z Brassica rapa HOM05D001038 ORTHO05D019929 4.8e-09 65.9 124 29.8
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 8.2e-09 65.1 104 40.4
BcaB02g10826 Brassica carinata HOM05D001038 ORTHO05D021697 1.4e-08 64.3 99 34.3
BcaC04g22987 Brassica carinata HOM05D062974 ORTHO05D000395 1.4e-08 64.3 125 35.2
C06p00840 Brassica napus HOM05D001038 ORTHO05D010946 1.4e-08 64.3 189 28.0
BcaB05g22095 Brassica carinata HOM05D001038 ORTHO05D016776 1.8e-08 63.9 99 30.3
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-08 63.5 125 32.0
A02p12560 Brassica napus HOM05D001038 ORTHO05D019929 4.1e-08 62.8 124 29.0
BcaB04g17690 Brassica carinata HOM05D001038 ORTHO05D018589 5.3e-08 62.4 139 28.8
C05p36210 Brassica napus HOM05D001038 ORTHO05D017560 5.3e-08 62.4 92 34.8
BolC5t32344H Brassica oleracea HOM05D001038 ORTHO05D017560 5.3e-08 62.4 92 34.8
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 5.3e-08 62.4 225 26.7
A05p21480 Brassica napus HOM05D001038 ORTHO05D032193 7.0e-08 62.0 86 39.5
C02p45450 Brassica napus HOM05D001038 ORTHO05D017560 7.0e-08 62.0 112 29.5
BraA05t21066Z Brassica rapa HOM05D001038 ORTHO05D032193 7.0e-08 62.0 86 39.5
A02p37020 Brassica napus HOM05D001038 ORTHO05D000395 9.1e-08 61.6 65 47.7
BolC3t15494H Brassica oleracea HOM05D001038 ORTHO05D010946 1.2e-07 61.2 225 23.6
A04p11350 Brassica napus HOM05D001038 ORTHO05D033175 2.0e-07 60.5 94 34.0
BraA04t16797Z Brassica rapa HOM05D001038 ORTHO05D033175 2.0e-07 60.5 94 34.0
C07p21850 Brassica napus HOM05D001038 ORTHO05D019929 4.5e-07 59.3 120 29.2
A09p28390 Brassica napus HOM05D001038 ORTHO05D000395 1.0e-06 58.2 105 37.1
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-06 57.8 135 31.1
BraA05t21067Z Brassica rapa HOM05D001038 ORTHO05D017560 1.7e-06 57.4 69 39.1
C03p31470 Brassica napus HOM05D001038 ORTHO05D010946 2.2e-06 57.0 225 23.1
C05p34670 Brassica napus HOM05D001038 ORTHO05D032287 3.8e-06 56.2 239 25.5
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 6.5e-06 55.5 126 34.9
C07p11920 Brassica napus HOM05D001038 ORTHO05D031981 8.5e-06 55.1 85 30.6


User provided reference genes

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