Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p01610 Brassica napus HOM05D004413 ORTHO05D005199 1.4e-234 815.8 396 100.0
BolC8t46964H Brassica oleracea HOM05D004413 ORTHO05D005199 1.4e-234 815.8 396 100.0
BcaC07g36870 Brassica carinata HOM05D004413 ORTHO05D005199 4.1e-226 787.7 386 98.7
A08p36630 Brassica napus HOM05D004413 ORTHO05D005199 3.4e-212 741.5 398 92.2
BraA08t35565Z Brassica rapa HOM05D004413 ORTHO05D005199 3.4e-212 741.5 398 92.2
BcaB03g13464 Brassica carinata HOM05D004413 ORTHO05D005199 4.3e-199 698.0 384 88.3
Carub.0001s0418 Capsella rubella HOM05D004413 ORTHO05D005199 8.1e-166 587.4 393 74.6
AT1G04945 Arabidopsis thaliana HOM05D004413 ORTHO05D005199 4.5e-164 581.6 397 75.1
Sp1g03790 Schrenkiella parvula HOM05D004413 ORTHO05D005199 4.2e-162 575.1 397 73.3
Aa31LG1G19950 Aethionema arabicum HOM05D004413 ORTHO05D005199 2.1e-161 572.8 402 71.6
AL1G14670 Arabidopsis lyrata HOM05D004413 ORTHO05D005199 7.6e-156 554.3 397 72.3
Thhalv10007024m.g Eutrema salsugineum HOM05D004413 ORTHO05D005199 4.2e-154 548.5 409 69.9
CARHR004350 Cardamine hirsuta HOM05D004413 ORTHO05D005199 4.9e-147 525.0 398 67.3
THA.LOC104826126 Tarenaya hassleriana HOM05D004413 ORTHO05D005199 4.1e-133 478.8 397 62.0
Thecc.01G415800 Theobroma cacao HOM05D004413 ORTHO05D005199 5.2e-120 435.3 409 56.5
Gohir.A08G005500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 3.2e-114 416.0 410 54.9
Gohir.A08G146400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 5.5e-114 415.2 412 54.6
Gohir.A01G019401 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.6e-113 413.7 405 54.8
Gohir.D08G167400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 2.1e-113 413.3 412 54.6
Gorai.004G174800 Gossypium raimondii HOM05D004413 ORTHO05D005199 2.7e-113 412.9 412 54.6
Duzib138G1189 Durio zibethinus HOM05D004413 ORTHO05D005199 8.0e-113 411.4 407 55.3
MD07G1003300 Malus domestica HOM05D004413 ORTHO05D005199 1.4e-112 410.6 416 53.1
BcaC08g43081 Brassica carinata HOM05D004413 ORTHO05D005199 8.8e-112 407.9 281 72.6
GSVIVG01001402001 Vitis vinifera HOM05D004413 ORTHO05D005199 8.8e-112 407.9 383 55.4
Ciclev10031642m.g Citrus clementina HOM05D004413 ORTHO05D005199 7.5e-111 404.8 409 54.5
C06p03410 Brassica napus HOM05D004413 ORTHO05D005199 9.7e-111 404.4 281 72.2
BolC6t35480H Brassica oleracea HOM05D004413 ORTHO05D005199 9.7e-111 404.4 281 72.2
Haze_03259 Corylus avellana HOM05D004413 ORTHO05D005199 9.7e-111 404.4 409 53.3
MD02G1318000 Malus domestica HOM05D004413 ORTHO05D005199 2.8e-110 402.9 416 52.6
TWI09G1219 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 2.8e-110 402.9 429 52.2
A06p04180 Brassica napus HOM05D004413 ORTHO05D005199 8.3e-110 401.4 282 72.3
BraA06t23623Z Brassica rapa HOM05D004413 ORTHO05D005199 8.3e-110 401.4 282 72.0
Manes.10G150400 Manihot esculenta HOM05D004413 ORTHO05D005199 1.4e-109 400.6 420 52.4
CSS0018065 Camellia sinensis var. sinensis HOM05D004413 ORTHO05D005199 2.4e-109 399.8 375 56.8
COL.COLO4_30064 Corchorus olitorius HOM05D004413 ORTHO05D005199 4.1e-109 399.1 416 53.6
Phvul.004G126300 Phaseolus vulgaris HOM05D004413 ORTHO05D005199 5.9e-108 395.2 408 52.2
Cpa.g.sc189.31 Carica papaya HOM05D004413 ORTHO05D005199 2.2e-107 393.3 393 54.5
Cfa010719 Carpinus fangiana HOM05D004413 ORTHO05D005199 2.9e-107 392.9 408 52.5
RcHm_v2.0_Chr7g0230361 Rosa chinensis HOM05D004413 ORTHO05D005199 5.0e-107 392.1 406 52.7
arahy.Tifrunner.gnm1.ann1.X2RX6E Arachis hypogaea HOM05D004413 ORTHO05D005199 8.5e-107 391.3 419 52.3
Atru.chr11.2687 Acer truncatum HOM05D004413 ORTHO05D005199 1.1e-106 391.0 413 52.3
FAN13G1137 Fragaria x ananassa HOM05D004413 ORTHO05D005199 2.5e-106 389.8 417 50.6
Lalb_Chr19g0124241 Lupinus albus HOM05D004413 ORTHO05D005199 3.2e-106 389.4 418 53.6
FvH4_5g32720 Fragaria vesca HOM05D004413 ORTHO05D005199 9.4e-106 387.9 417 50.4
FAN18G0644 Fragaria x ananassa HOM05D004413 ORTHO05D005199 9.4e-106 387.9 417 50.4
Glyma.16G203400 Glycine max HOM05D004413 ORTHO05D005199 2.1e-105 386.7 418 51.9
Sed0007945 Sechium edule HOM05D004413 ORTHO05D005199 8.0e-105 384.8 398 50.5
arahy.Tifrunner.gnm1.ann1.8FHU3N Arachis hypogaea HOM05D004413 ORTHO05D005199 1.8e-104 383.6 419 51.3
CANSAT64G0940 Cannabis sativa HOM05D004413 ORTHO05D005199 8.8e-104 381.3 446 47.3
QL04p000397 Quercus lobata HOM05D004413 ORTHO05D005199 8.8e-104 381.3 472 46.2
TPR.G25309 Trifolium pratense HOM05D004413 ORTHO05D005199 1.2e-103 380.9 389 54.5
VMungo0464G1648 Vigna mungo HOM05D004413 ORTHO05D005199 1.5e-103 380.6 408 50.5
Glyma.09G152600 Glycine max HOM05D004413 ORTHO05D005199 3.4e-103 379.4 418 51.2
QL04p002426 Quercus lobata HOM05D004413 ORTHO05D005199 5.7e-103 378.6 450 48.2
Potri.001G228000 Populus trichocarpa HOM05D004413 ORTHO05D005199 7.5e-103 378.3 428 49.8
TAR636G2532 Trochodendron aralioides HOM05D004413 ORTHO05D005199 7.5e-103 378.3 424 49.3
FAN08G0618 Fragaria x ananassa HOM05D004413 ORTHO05D005199 9.8e-103 377.9 424 49.3
Ca_02163_v3 Cicer arietinum L. HOM05D004413 ORTHO05D005199 6.3e-102 375.2 403 52.4
Oeu013591.1 Olea europaea HOM05D004413 ORTHO05D005199 8.3e-102 374.8 352 54.3
TPR.G37653 Trifolium pratense HOM05D004413 ORTHO05D005199 8.3e-102 374.8 407 52.1
CANSAT01G0573 Cannabis sativa HOM05D004413 ORTHO05D005199 3.1e-101 372.9 436 47.5
CANSAT01G1789 Cannabis sativa HOM05D004413 ORTHO05D005199 3.1e-101 372.9 436 47.7
ClCG09G003830 Citrullus lanatus HOM05D004413 ORTHO05D005199 9.1e-101 371.3 408 48.3
Medtr6g463300 Medicago truncatula HOM05D004413 ORTHO05D005199 1.7e-99 367.1 408 51.0
Psat1g110760 Pisum sativum HOM05D004413 ORTHO05D005199 1.7e-99 367.1 412 51.2
Sabra16G0135900 Salix brachista HOM05D004413 ORTHO05D005199 4.2e-98 362.5 424 49.3
Sc17g0005470 Simmondsia chinensis HOM05D004413 ORTHO05D005199 4.2e-98 362.5 393 50.6
Lj2g0027526 Lotus japonicus HOM05D004413 ORTHO05D005199 5.5e-98 362.1 403 50.9
CiPaw.16G012500 Carya illinoinensis HOM05D004413 ORTHO05D005199 9.5e-98 361.3 388 50.8
Psat6g015760 Pisum sativum HOM05D004413 ORTHO05D005199 2.8e-97 359.8 297 61.6
Sed0010518 Sechium edule HOM05D004413 ORTHO05D005199 3.6e-97 359.4 385 48.8
Dinv43918 Davidia involucrata HOM05D004413 ORTHO05D005199 6.1e-97 358.6 395 48.6
MSTRG.28094 Avicennia marina HOM05D004413 ORTHO05D005199 8.0e-97 358.2 412 49.3
Nitab4.5_0001006g0010 Nicotiana tabacum HOM05D004413 ORTHO05D005199 4.0e-96 355.9 379 52.8
Nitab4.5_0000346g0070 Nicotiana tabacum HOM05D004413 ORTHO05D005199 5.2e-96 355.5 348 55.5
Migut.N01644 Erythranthe guttata HOM05D004413 ORTHO05D005199 1.5e-95 354.0 376 49.2
vmacro21162 Vaccinium macrocarpon HOM05D004413 ORTHO05D005199 2.0e-95 353.6 432 47.5
SGA_v2.0_scaffold95G28780 Striga asiatica HOM05D004413 ORTHO05D005199 4.4e-95 352.4 371 52.0
CsaV3_7G031400 Cucumis sativus L. HOM05D004413 ORTHO05D005199 5.7e-95 352.1 412 47.3
Aqoxy2G00074 Aquilegia oxysepala HOM05D004413 ORTHO05D005199 7.5e-95 351.7 372 52.2
GSVIVG01037065001 Vitis vinifera HOM05D004413 ORTHO05D005199 7.5e-95 351.7 274 63.1
CAN.G1393.6 Capsicum annuum HOM05D004413 ORTHO05D005199 3.7e-94 349.4 299 59.2
Rhsim01G0132100 Rhododendron simsii HOM05D004413 ORTHO05D005199 3.1e-93 346.3 505 42.2
Lalb_Chr19g0124231 Lupinus albus HOM05D004413 ORTHO05D005199 5.4e-93 345.5 302 57.9
PGR031G3941 Punica granatum HOM05D004413 ORTHO05D005199 9.2e-93 344.7 399 48.1
AUR62035034 Chenopodium quinoa HOM05D004413 ORTHO05D005199 3.5e-92 342.8 425 45.6
Cc02_g27150 Coffea canephora HOM05D004413 ORTHO05D005199 5.9e-92 342.0 286 60.8
Solyc01g074020.3 Solanum lycopersicum HOM05D004413 ORTHO05D005199 1.0e-91 341.3 317 56.2
Lsat_1_v5_gn_4_46341 Lactuca sativa HOM05D004413 ORTHO05D005199 2.3e-91 340.1 351 51.9
Prupe.2G005000 Prunus persica HOM05D004413 ORTHO05D005199 5.0e-91 339.0 407 47.7
Peaxi162Scf01343g00011 Petunia axillaris HOM05D004413 ORTHO05D005199 6.6e-91 338.6 343 53.4
Nn3g19386 Nelumbo nucifera HOM05D004413 ORTHO05D005199 8.6e-91 338.2 446 45.5
AUR62016087 Chenopodium quinoa HOM05D004413 ORTHO05D005199 2.5e-90 336.7 425 45.4
PSO210G0136 Papaver somniferum HOM05D004413 ORTHO05D005199 2.1e-89 333.6 397 46.3
Hma1.2p1_0038F.1_g024150 Hydrangea macrophylla HOM05D004413 ORTHO05D005199 1.2e-87 327.8 412 44.7
PSO210G4410 Papaver somniferum HOM05D004413 ORTHO05D005199 1.5e-87 327.4 400 46.8
HanXRQChr16g0520481 Helianthus annuus HOM05D004413 ORTHO05D005199 1.3e-86 324.3 297 56.2
PSO170G4481 Papaver somniferum HOM05D004413 ORTHO05D005199 6.4e-86 322.0 402 45.8
Atru.chr1.1383 Acer truncatum HOM05D004413 ORTHO05D005199 8.3e-86 321.6 245 64.1
Hund04656 Selenicereus undatus HOM05D004413 ORTHO05D005199 1.2e-84 317.8 412 44.2
EL10Ac3g05776 Beta vulgaris HOM05D004413 ORTHO05D005199 1.6e-84 317.4 427 44.3
arahy.Tifrunner.gnm1.ann1.0XNQ2B Arachis hypogaea HOM05D004413 ORTHO05D005199 4.6e-84 315.8 395 45.3
Lj9A624G21 Lonicera japonica HOM05D004413 ORTHO05D005199 1.3e-83 314.3 414 45.9
arahy.Tifrunner.gnm1.ann1.MVM3BY Arachis hypogaea HOM05D004413 ORTHO05D005199 3.9e-83 312.8 402 45.3
MELO3C023518.2 Cucumis melo HOM05D004413 ORTHO05D005199 2.8e-81 306.6 393 44.8
CDE12G0144 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 3.6e-81 306.2 439 43.3
CDE04G1207 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 6.2e-81 305.4 439 42.8
HPP92_005742 Vanilla planifolia HOM05D004413 ORTHO05D005199 2.0e-79 300.4 397 44.1
Ah.07g208370 Amaranthus hybridus HOM05D004413 ORTHO05D005199 4.1e-77 292.7 428 42.3
SHI15877 Sapria himalayana HOM05D004413 ORTHO05D005199 2.7e-76 290.0 393 42.7
ATR0582G367 Amborella trichopoda HOM05D004413 ORTHO05D005199 6.6e-75 285.4 433 40.9
Os01g0962500 Oryza sativa ssp. japonica HOM05D004413 ORTHO05D005199 1.3e-67 261.2 288 49.0
Zm00001eb140340 Zea mays HOM05D004413 ORTHO05D005199 8.1e-65 251.9 301 46.2
Gohir.A11G220500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 3.1e-64 250.0 293 48.8
unitig_578.g16701 Utricularia gibba HOM05D004413 ORTHO05D005199 4.0e-64 249.6 254 50.4
Actinidia21569 Actinidia chinensis HOM05D004413 ORTHO05D005199 1.3e-62 244.6 291 48.5
SEGI_33976 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 7.8e-60 235.3 294 46.3
PGSC0003DMG400006318 Solanum tuberosum HOM05D004413 ORTHO05D005199 1.3e-59 234.6 226 54.9
ECA234G1090 Erigeron canadensis HOM05D004413 ORTHO05D005199 4.8e-57 226.1 330 41.8
Dinv43485 Davidia involucrata HOM05D004413 ORTHO05D005199 7.6e-55 218.8 169 63.3
Lj9A625T17 Lonicera japonica HOM05D004413 ORTHO05D005199 2.7e-52 210.3 353 40.2
Pp3c11_18200 Physcomitrium patens HOM05D004413 ORTHO05D005199 1.7e-51 207.6 285 41.8
SGA_v2.0_scaffold4G02237 Striga asiatica HOM05D004413 ORTHO05D005199 8.7e-51 205.3 190 56.3
SMO351G0528 Selaginella moellendorffii HOM05D004413 ORTHO05D005199 1.9e-50 204.1 326 39.9
Mapoly0103s0075 Marchantia polymorpha HOM05D004413 ORTHO05D005199 1.9e-42 177.6 291 38.5
Sopen01g033590 Solanum pennellii HOM05D004413 ORTHO05D005199 9.6e-42 175.3 179 54.7
BraA09t42095Z Brassica rapa HOM05D004413 ORTHO05D005199 1.3e-41 174.9 108 78.7
Cre01.g049400 Chlamydomonas reinhardtii HOM05D004413 ORTHO05D005199 6.2e-41 172.6 244 39.8
PSO170G2986 Papaver somniferum HOM05D004413 ORTHO05D005199 6.2e-41 172.6 244 41.4
AagrBONN_evm.TU.Sc2ySwM_228.625 Anthoceros agrestis HOM05D004413 ORTHO05D005199 3.1e-40 170.2 280 40.7
Sopen01g033580 Solanum pennellii HOM05D004413 ORTHO05D005199 4.0e-40 169.9 126 61.1
DCAR_015691 Daucus carota HOM05D004413 ORTHO05D005199 7.6e-39 165.6 128 61.7
GSVIVG01027705001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.0e-38 165.2 128 63.3
A08p37250 Brassica napus HOM05D004413 ORTHO05D005199 1.3e-38 164.9 75 100.0
Aa31LG1G19980 Aethionema arabicum HOM05D004413 ORTHO05D005199 1.9e-37 161.0 178 51.7
CBR_g50781 Chara braunii HOM05D004413 ORTHO05D005199 3.9e-35 153.3 271 35.1
Actinidia21570 Actinidia chinensis HOM05D004413 ORTHO05D005199 7.6e-31 139.0 96 66.7
SEGI_10444 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 9.3e-29 132.1 185 41.6
SEGI_03996 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 3.0e-27 127.1 185 40.0
Actinidia15863 Actinidia chinensis HOM05D004413 ORTHO05D005199 3.9e-27 126.7 80 73.8
GSVIVG01027710001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.1e-26 125.2 101 63.4
HanXRQChr11g0328201 Helianthus annuus HOM05D004413 ORTHO05D005199 1.7e-22 111.3 72 70.8
PRCOL_00005718 Prasinoderma coloniale HOM05D004413 ORTHO05D005199 1.2e-20 105.1 169 38.5
QL04p000430 Quercus lobata HOM05D004413 ORTHO05D005199 2.1e-20 104.4 206 32.5
GSVIVG01027698001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.0e-19 102.1 61 70.5
MCO07G333 Micromonas commoda HOM05D004413 ORTHO05D005199 1.4e-19 101.7 266 28.2
DCAR_015690 Daucus carota HOM05D004413 ORTHO05D005199 6.7e-19 99.4 224 34.8
Manes.10G149900 Manihot esculenta HOM05D000073 ORTHO05D000033 1.1e-18 98.6 73 64.4
GSVIVG01018194001 Vitis vinifera HOM05D004413 ORTHO05D005199 4.3e-18 96.7 66 63.6
Actinidia15864 Actinidia chinensis HOM05D004413 ORTHO05D005199 2.8e-17 94.0 85 54.1
GSVIVG01027714001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.0e-14 85.5 177 38.4
TAR633G2579 Trochodendron aralioides HOM05D004413 ORTHO05D005199 3.8e-14 83.6 107 46.7
GSVIVG01027696001 Vitis vinifera HOM05D004413 ORTHO05D005199 3.8e-14 83.6 47 68.1
TWI73G0758 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 1.1e-13 82.0 96 46.9
GSVIVG01026105001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.7e-12 77.4 63 60.3
GSVIVG01012403001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.4e-11 75.1 53 66.0
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 1.4e-08 65.1 56 55.4
GSVIVG01037069001 Vitis vinifera HOM05D004413 ORTHO05D005199 4.5e-07 60.1 49 61.2
Nitab4.5_0003792g0060 Nicotiana tabacum HOM05D004413 ORTHO05D005199 1.3e-06 58.5 72 48.6


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