Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p62910 Brassica napus HOM05D001764 ORTHO05D040953 3.1e-15 84.0 42 100.0
BolC7t46702H Brassica oleracea HOM05D001764 ORTHO05D040953 9.0e-15 82.4 42 97.6
BolC2t12343H Brassica oleracea HOM05D001764 ORTHO05D001946 6.4e-13 76.3 42 90.5
BcaNung03395 Brassica carinata HOM05D001764 ORTHO05D001946 8.4e-13 75.9 42 90.5
C07p62950 Brassica napus HOM05D001764 ORTHO05D001946 1.4e-12 75.1 42 90.5
BcaNung05327 Brassica carinata HOM05D001764 ORTHO05D001946 4.6e-11 70.1 42 81.0
BolC3t20093H Brassica oleracea HOM05D001764 ORTHO05D001946 4.6e-11 70.1 42 81.0
Carub.0007s0172 Capsella rubella HOM05D001764 ORTHO05D001946 4.6e-11 70.1 42 83.3
C03p78330 Brassica napus HOM05D001764 ORTHO05D001946 7.9e-11 69.3 42 78.6
BcaNung02308 Brassica carinata HOM05D001764 ORTHO05D001946 1.3e-10 68.6 42 85.7
A08p23340 Brassica napus HOM05D001764 ORTHO05D001946 3.9e-10 67.0 42 76.2
BraA08t34288Z Brassica rapa HOM05D001764 ORTHO05D001946 3.9e-10 67.0 42 76.2
AL7G12030 Arabidopsis lyrata HOM05D001764 ORTHO05D001946 8.7e-10 65.9 42 81.0
BcaNung00903 Brassica carinata HOM05D001764 ORTHO05D001946 8.7e-10 65.9 42 81.0
C01p00840 Brassica napus HOM05D001764 ORTHO05D001946 8.7e-10 65.9 42 81.0
BolC1t00085H Brassica oleracea HOM05D001764 ORTHO05D001946 8.7e-10 65.9 42 81.0
Thhalv10026855m.g Eutrema salsugineum HOM05D001764 ORTHO05D001946 8.7e-10 65.9 42 81.0
Sp7g36080 Schrenkiella parvula HOM05D001764 ORTHO05D001946 1.9e-09 64.7 42 78.6
AT4G39810 Arabidopsis thaliana HOM05D001764 ORTHO05D001946 3.3e-09 63.9 42 81.0
BcaNung07119 Brassica carinata HOM05D001764 ORTHO05D001946 2.1e-08 61.2 42 76.2
CARHR246890 Cardamine hirsuta HOM05D001764 ORTHO05D001946 4.8e-08 60.1 42 73.8
Aa31LG6G15460 Aethionema arabicum HOM05D001764 ORTHO05D001946 1.1e-07 58.9 42 73.8
A01p00730 Brassica napus HOM05D001764 ORTHO05D001946 1.4e-07 58.5 42 73.8
BraA01t00077Z Brassica rapa HOM05D001764 ORTHO05D001946 1.4e-07 58.5 42 73.8
PGR004G1214 Punica granatum HOM05D001764 ORTHO05D001946 1.8e-07 58.2 43 65.1
Atru.chr1.3712 Acer truncatum HOM05D001764 ORTHO05D001946 5.8e-06 53.1 42 59.5
Lalb_Chr07g0185031 Lupinus albus HOM05D001764 ORTHO05D001946 7.6e-06 52.8 42 61.9
Thecc.01G106000 Theobroma cacao HOM05D001764 ORTHO05D001946 7.6e-06 52.8 42 61.9
Atru.chr4.225 Acer truncatum HOM05D001764 ORTHO05D001946 1.0e-05 52.4 42 59.5


User provided reference genes

Program Settings