Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p57320 Brassica napus HOM05D006474 ORTHO05D007994 1.6e-263 912.1 439 100.0
BolC7t46201H Brassica oleracea HOM05D006474 ORTHO05D007994 2.2e-260 901.7 441 98.9
BraA03t14988Z Brassica rapa HOM05D006474 ORTHO05D007994 9.7e-237 823.2 441 91.8
A03p59310 Brassica napus HOM05D006474 ORTHO05D007994 1.3e-236 822.8 441 91.8
BcaNung00499 Brassica carinata HOM05D006474 ORTHO05D007994 1.5e-213 746.1 449 84.6
Sp7g27700 Schrenkiella parvula HOM05D006474 ORTHO05D007994 6.0e-210 734.2 444 83.8
Thhalv10025251m.g Eutrema salsugineum HOM05D006474 ORTHO05D007994 1.1e-203 713.4 437 80.5
AL7G22360 Arabidopsis lyrata HOM05D006474 ORTHO05D007994 2.0e-197 692.6 441 78.5
Carub.0007s1076 Capsella rubella HOM05D006474 ORTHO05D007994 4.4e-197 691.4 437 78.7
AT4G29890 Arabidopsis thaliana HOM05D006474 ORTHO05D007994 1.3e-193 679.9 442 76.9
CARHR237790 Cardamine hirsuta HOM05D006474 ORTHO05D007994 3.3e-192 675.2 440 76.4
Aa31LG2G20660 Aethionema arabicum HOM05D006474 ORTHO05D007994 2.9e-180 635.6 406 75.9
GSVIVG01029282001 Vitis vinifera HOM05D006474 ORTHO05D007994 1.1e-160 570.5 422 65.6
Nitab4.5_0004916g0010 Nicotiana tabacum HOM05D006474 ORTHO05D007994 6.5e-156 554.7 370 69.5
RcHm_v2.0_Chr4g0398871 Rosa chinensis HOM05D006474 ORTHO05D007994 1.9e-155 553.1 371 69.3
Cpa.g.sc115.63 Carica papaya HOM05D006474 ORTHO05D007994 5.5e-155 551.6 413 64.6
Peaxi162Scf00046g00533 Petunia axillaris HOM05D006474 ORTHO05D007994 5.5e-155 551.6 375 68.0
PGSC0003DMG400019888 Solanum tuberosum HOM05D006474 ORTHO05D007994 5.5e-155 551.6 394 66.0
EL10Ac8g19287 Beta vulgaris HOM05D006474 ORTHO05D007994 7.1e-155 551.2 386 65.8
Actinidia38505 Actinidia chinensis HOM05D006474 ORTHO05D007994 1.2e-154 550.4 378 68.0
Thecc.04G204000 Theobroma cacao HOM05D006474 ORTHO05D007994 1.2e-154 550.4 369 69.4
HanXRQChr06g0181391 Helianthus annuus HOM05D006474 ORTHO05D007994 1.6e-154 550.1 437 60.2
Ca_21263_v3 Cicer arietinum L. HOM05D006474 ORTHO05D007994 2.7e-154 549.3 385 66.8
Eucgr.C00087 Eucalyptus grandis HOM05D006474 ORTHO05D007994 4.6e-154 548.5 400 64.5
QL02p064597 Quercus lobata HOM05D006474 ORTHO05D007994 4.6e-154 548.5 388 66.5
Manes.06G017600 Manihot esculenta HOM05D006474 ORTHO05D007994 6.1e-154 548.1 393 65.9
Nitab4.5_0000028g0400 Nicotiana tabacum HOM05D006474 ORTHO05D007994 7.9e-154 547.7 388 67.3
Potri.006G072800 Populus trichocarpa HOM05D006474 ORTHO05D007994 1.0e-153 547.4 437 62.2
Glyma.17G057700 Glycine max HOM05D006474 ORTHO05D007994 1.8e-153 546.6 374 67.1
vmacro20800 Vaccinium macrocarpon HOM05D006474 ORTHO05D007994 2.3e-153 546.2 405 64.4
Sopen07g004200 Solanum pennellii HOM05D006474 ORTHO05D007994 3.0e-153 545.8 372 68.5
Migut.J00779 Erythranthe guttata HOM05D006474 ORTHO05D007994 3.9e-153 545.4 373 66.5
TAR383G1087 Trochodendron aralioides HOM05D006474 ORTHO05D007994 8.7e-153 544.3 383 66.6
AUR62027431 Chenopodium quinoa HOM05D006474 ORTHO05D007994 1.1e-152 543.9 392 63.8
Solyc07g008310.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 1.9e-152 543.1 369 69.1
MSTRG.5932 Avicennia marina HOM05D006474 ORTHO05D007994 2.5e-152 542.7 388 64.4
TPR.G5392 Trifolium pratense HOM05D006474 ORTHO05D007994 3.3e-152 542.3 388 65.2
CiPaw.07G199100 Carya illinoinensis HOM05D006474 ORTHO05D007994 4.3e-152 542.0 386 67.1
Lalb_Chr07g0180731 Lupinus albus HOM05D006474 ORTHO05D007994 4.3e-152 542.0 378 66.4
FAN07G0584 Fragaria x ananassa HOM05D006474 ORTHO05D007994 7.4e-152 541.2 371 68.5
Sabra06G0054200 Salix brachista HOM05D006474 ORTHO05D007994 7.4e-152 541.2 426 62.0
Aqoxy7G02891 Aquilegia oxysepala HOM05D006474 ORTHO05D007994 3.7e-151 538.9 376 65.2
FvH4_4g06930 Fragaria vesca HOM05D006474 ORTHO05D007994 4.8e-151 538.5 371 68.7
Gohir.A05G408600 Gossypium hirsutum HOM05D006474 ORTHO05D007994 4.8e-151 538.5 369 67.5
DCAR_020143 Daucus carota HOM05D006474 ORTHO05D007994 1.1e-150 537.3 372 66.1
MD13G1241100 Malus domestica HOM05D006474 ORTHO05D007994 1.1e-150 537.3 371 67.4
Cc01_g11810 Coffea canephora HOM05D006474 ORTHO05D007994 2.4e-150 536.2 390 64.1
FAN12G2823 Fragaria x ananassa HOM05D006474 ORTHO05D007994 2.4e-150 536.2 371 68.5
Sc14g0003050 Simmondsia chinensis HOM05D006474 ORTHO05D007994 2.4e-150 536.2 371 67.1
TWI32G0724 Tripterygium wilfordii HOM05D006474 ORTHO05D007994 2.4e-150 536.2 432 60.9
ECA236G3875 Erigeron canadensis HOM05D006474 ORTHO05D007994 3.1e-150 535.8 374 64.2
PGR142G0270 Punica granatum HOM05D006474 ORTHO05D007994 5.3e-150 535.0 434 61.1
Medtr4g127130 Medicago truncatula HOM05D006474 ORTHO05D007994 9.0e-150 534.3 385 65.2
Lj4g0020492 Lotus japonicus HOM05D006474 ORTHO05D007994 1.2e-149 533.9 375 65.1
Gorai.012G008200 Gossypium raimondii HOM05D006474 ORTHO05D007994 2.0e-149 533.1 405 63.2
COL.COLO4_37571 Corchorus olitorius HOM05D006474 ORTHO05D007994 2.6e-149 532.7 369 67.2
arahy.Tifrunner.gnm1.ann1.HVXZ0P Arachis hypogaea HOM05D006474 ORTHO05D007994 4.5e-149 531.9 376 64.9
FAN17G1111 Fragaria x ananassa HOM05D006474 ORTHO05D007994 5.9e-149 531.6 371 67.4
MELO3C009992.2 Cucumis melo HOM05D006474 ORTHO05D007994 1.7e-148 530.0 430 61.2
SGA_v2.0_scaffold112G31632 Striga asiatica HOM05D006474 ORTHO05D007994 2.2e-148 529.6 433 57.5
PSO063G0500 Papaver somniferum HOM05D006474 ORTHO05D007994 1.4e-147 526.9 420 60.2
ClCG03G011950 Citrullus lanatus HOM05D006474 ORTHO05D007994 7.2e-147 524.6 392 64.8
CsaV3_1G043980 Cucumis sativus L. HOM05D006474 ORTHO05D007994 2.1e-146 523.1 369 67.2
Duzib170G0180 Durio zibethinus HOM05D006474 ORTHO05D007994 2.1e-146 523.1 426 60.3
CDE02G2399 Ceratophyllum demersum HOM05D006474 ORTHO05D007994 3.6e-146 522.3 415 60.5
MBI14_g10727_MAGBIO Magnolia biondii HOM05D006474 ORTHO05D007994 7.9e-146 521.2 446 58.1
Ciclev10008481m.g Citrus clementina HOM05D006474 ORTHO05D007994 5.1e-145 518.5 376 66.2
Nn8g40661 Nelumbo nucifera HOM05D006474 ORTHO05D007994 1.1e-144 517.3 413 60.8
Haze_22046 Corylus avellana HOM05D006474 ORTHO05D007994 2.5e-144 516.2 472 57.4
Oeu035450.1 Olea europaea HOM05D006474 ORTHO05D007994 3.3e-144 515.8 370 65.4
Solyc07g008300.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 1.1e-142 510.8 370 66.2
SalBow1G1087 Salvia bowleyana HOM05D006474 ORTHO05D007994 5.3e-142 508.4 382 60.7
ATR0580G130 Amborella trichopoda HOM05D006474 ORTHO05D007994 5.9e-141 505.0 390 62.3
Rhsim01G0114400 Rhododendron simsii HOM05D006474 ORTHO05D007994 7.7e-141 504.6 341 69.2
Sopen07g004190 Solanum pennellii HOM05D006474 ORTHO05D007994 7.7e-141 504.6 368 64.9
arahy.Tifrunner.gnm1.ann1.Z6GGIF Arachis hypogaea HOM05D006474 ORTHO05D007994 3.8e-140 502.3 390 61.3
Dinv41197 Davidia involucrata HOM05D006474 ORTHO05D007994 3.8e-140 502.3 370 63.8
Zm00001eb273050 Zea mays HOM05D006474 ORTHO05D007994 6.5e-140 501.5 388 61.1
Sed0007392 Sechium edule HOM05D006474 ORTHO05D007994 8.5e-140 501.1 394 60.9
Prupe.1G072500 Prunus persica HOM05D006474 ORTHO05D007994 1.4e-139 500.4 371 64.7
HPP92_010297 Vanilla planifolia HOM05D006474 ORTHO05D007994 1.9e-139 500.0 399 60.9
Os06g0698785 Oryza sativa ssp. japonica HOM05D006474 ORTHO05D007994 4.2e-139 498.8 408 58.8
HanXRQChr06g0181381 Helianthus annuus HOM05D006474 ORTHO05D007994 1.2e-138 497.3 437 55.4
Atru.BG.24.p Acer truncatum HOM05D006474 ORTHO05D007994 2.1e-138 496.5 352 68.8
Sed0005056 Sechium edule HOM05D006474 ORTHO05D007994 3.3e-136 489.2 369 63.4
Gohir.D04G006800 Gossypium hirsutum HOM05D006474 ORTHO05D007994 1.8e-134 483.4 401 59.6
Psat4g014320 Pisum sativum HOM05D006474 ORTHO05D007994 2.6e-133 479.6 354 63.0
CANSAT54G2413 Cannabis sativa HOM05D006474 ORTHO05D007994 1.0e-132 477.6 346 65.3
Migut.J00780 Erythranthe guttata HOM05D006474 ORTHO05D007994 8.5e-132 474.6 369 58.8
Lsat_1_v5_gn_8_68301 Lactuca sativa HOM05D006474 ORTHO05D007994 1.6e-130 470.3 374 59.4
Ah.14g085320 Amaranthus hybridus HOM05D006474 ORTHO05D007994 1.0e-129 467.6 328 66.2
AagrBONN_evm.TU.Sc2ySwM_117.1622 Anthoceros agrestis HOM05D006474 ORTHO05D007994 6.3e-127 458.4 368 57.3
CAN.G403.4 Capsicum annuum HOM05D006474 ORTHO05D007994 1.7e-124 450.3 319 65.8
AUR62031264 Chenopodium quinoa HOM05D006474 ORTHO05D007994 1.5e-123 447.2 310 66.8
SMO196G0177 Selaginella moellendorffii HOM05D006474 ORTHO05D007994 1.6e-122 443.7 416 53.4
AUR62032506 Chenopodium quinoa HOM05D006474 ORTHO05D007994 3.6e-122 442.6 387 52.7
AUR62043230 Chenopodium quinoa HOM05D006474 ORTHO05D007994 2.3e-121 439.9 387 51.9
Pp3c13_13580 Physcomitrium patens HOM05D006474 ORTHO05D007994 8.8e-121 438.0 380 54.5
Phvul.003G140100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 8.5e-116 421.4 295 64.7
Mapoly0089s0013 Marchantia polymorpha HOM05D006474 ORTHO05D007994 1.2e-112 411.0 383 51.7
EL10Ac6g13937 Beta vulgaris HOM05D006474 ORTHO05D007994 2.0e-109 400.2 375 49.3
PSO170G4238 Papaver somniferum HOM05D006474 ORTHO05D007994 6.8e-105 385.2 285 62.1
Cfa013469 Carpinus fangiana HOM05D006474 ORTHO05D007994 6.4e-95 352.1 286 61.5
Lju50A4G45 Lonicera japonica HOM05D006474 ORTHO05D007994 4.1e-94 349.4 268 63.8
CSS0012665 Camellia sinensis var. sinensis HOM05D006474 ORTHO05D007994 2.7e-93 346.7 231 71.0
MCO02G024 Micromonas commoda HOM05D006474 ORTHO05D007994 4.4e-88 329.3 368 46.5
Hund22985 Selenicereus undatus HOM05D006474 ORTHO05D007994 1.3e-71 274.6 378 42.1
FAN22G2051 Fragaria x ananassa HOM05D006474 ORTHO05D007994 1.4e-70 271.2 343 44.6
Lsat_1_v5_gn_9_69680 Lactuca sativa HOM05D006474 ORTHO05D007994 6.6e-68 262.3 265 55.1
Phvul.010G082000 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 4.5e-56 223.0 191 55.0
PRCOL_00004194 Prasinoderma coloniale HOM05D006474 ORTHO05D007994 2.2e-55 220.7 466 32.0
Lsat_1_v5_gn_5_32380 Lactuca sativa HOM05D006474 ORTHO05D007994 1.8e-52 211.1 197 53.3
Ah.03g136670 Amaranthus hybridus HOM05D006474 ORTHO05D007994 4.3e-51 206.5 240 42.9
SEGI_01125 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 6.1e-37 159.5 131 55.7
Phvul.011G131100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 3.1e-25 120.6 104 52.9
RcHm_v2.0_Chr4g0398881 Rosa chinensis HOM05D006474 ORTHO05D007994 2.5e-22 110.9 209 32.1
Actinidia29962 Actinidia chinensis HOM05D006474 ORTHO05D007994 1.3e-18 98.6 90 56.7
Thecc.09G192500 Theobroma cacao HOM05D006474 ORTHO05D007994 7.7e-16 89.4 61 72.1
SEGI_13868 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 1.7e-15 88.2 61 70.5
Gohir.A01G088200 Gossypium hirsutum HOM05D006474 ORTHO05D007994 2.2e-15 87.8 60 71.7
Gohir.A08G164600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 5.5e-14 83.2 88 48.9
Lsat_1_v5_gn_3_77541 Lactuca sativa HOM05D006474 ORTHO05D007994 3.7e-10 70.5 53 62.3
Oeu005633.1 Olea europaea HOM05D006474 ORTHO05D007994 1.8e-09 68.2 67 49.3
Gohir.A05G306101 Gossypium hirsutum HOM05D005508 ORTHO05D007994 3.5e-08 63.9 43 69.8
SEGI_25707 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 1.3e-07 62.0 56 48.2
Gohir.A06G077600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 1.9e-06 58.2 72 47.2
Nn1g08791 Nelumbo nucifera HOM05D004057 ORTHO05D004805 9.4e-06 55.8 95 35.8


User provided reference genes

Program Settings