Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p56450 Brassica napus HOM05D006778 ORTHO05D008341 1.1e-84 317.0 205 100.0
BolC7t46124H Brassica oleracea HOM05D006778 ORTHO05D008341 3.5e-80 302.0 205 96.1
A03p58430 Brassica napus HOM05D006778 ORTHO05D008341 2.1e-61 239.6 208 83.2
A01p09090 Brassica napus HOM05D006778 ORTHO05D008341 1.1e-46 190.7 210 58.6
BcaC09g51658 Brassica carinata HOM05D006778 ORTHO05D008341 2.8e-45 186.0 206 58.3
Sp7g26820 Schrenkiella parvula HOM05D006778 ORTHO05D008341 1.1e-44 184.1 208 56.7
BcaNung01362 Brassica carinata HOM05D006778 ORTHO05D008341 1.8e-44 183.3 205 57.1
BolC1t01026H Brassica oleracea HOM05D006778 ORTHO05D008341 1.4e-39 167.2 210 53.3
C01p10640 Brassica napus HOM05D006778 ORTHO05D008341 1.3e-37 160.6 207 61.8
BraA01t00857Z Brassica rapa HOM05D006778 ORTHO05D008341 2.8e-37 159.5 205 62.9
Thhalv10026155m.g Eutrema salsugineum HOM05D006778 ORTHO05D008341 3.7e-37 159.1 204 65.7
AT4G28820 Arabidopsis thaliana HOM05D006778 ORTHO05D008341 6.3e-37 158.3 212 51.4
BraA03t14903Z Brassica rapa HOM05D006778 ORTHO05D008341 6.3e-37 158.3 155 82.6
Carub.0007s1182 Capsella rubella HOM05D006778 ORTHO05D008341 8.2e-37 157.9 205 62.9
AL7G23670 Arabidopsis lyrata HOM05D006778 ORTHO05D008341 1.5e-33 147.1 235 46.0
THA.LOC104820057 Tarenaya hassleriana HOM05D006778 ORTHO05D008341 1.4e-31 140.6 201 43.8
CARHR236610 Cardamine hirsuta HOM05D006778 ORTHO05D008341 1.5e-30 137.1 211 54.5
CiPaw.04G108200 Carya illinoinensis HOM05D006778 ORTHO05D008341 1.1e-20 104.4 201 50.7
Cpa.g.sc8.198 Carica papaya HOM05D006778 ORTHO05D008341 3.1e-20 102.8 201 35.3
Manes.12G043800 Manihot esculenta HOM05D006778 ORTHO05D008341 7.0e-20 101.7 194 36.1
Glyma.10G042900 Glycine max HOM05D006778 ORTHO05D008341 7.7e-19 98.2 201 36.8
QL07p037469 Quercus lobata HOM05D006778 ORTHO05D008341 7.7e-19 98.2 201 38.3
Aa31LG2G21570 Aethionema arabicum HOM05D006778 ORTHO05D008341 1.0e-18 97.8 203 45.3
AUR62031811 Chenopodium quinoa HOM05D006778 ORTHO05D008341 1.7e-18 97.1 199 36.2
Cfa002523 Carpinus fangiana HOM05D006778 ORTHO05D008341 2.9e-18 96.3 202 35.6
Phvul.007G156300 Phaseolus vulgaris HOM05D006778 ORTHO05D008341 3.8e-18 95.9 201 36.8
FAN15G2222 Fragaria x ananassa HOM05D006778 ORTHO05D008341 5.0e-18 95.5 195 33.8
Lj3g0024250 Lotus japonicus HOM05D006778 ORTHO05D008341 5.0e-18 95.5 195 37.4
CiPaw.03G152900 Carya illinoinensis HOM05D006778 ORTHO05D008341 8.6e-18 94.7 198 36.4
Migut.D00505 Erythranthe guttata HOM05D006778 ORTHO05D008341 1.1e-17 94.4 197 33.0
Lalb_Chr21g0314231 Lupinus albus HOM05D006778 ORTHO05D008341 1.1e-17 94.4 199 35.2
FvH4_2g19780 Fragaria vesca HOM05D006778 ORTHO05D008341 1.9e-17 93.6 195 35.4
Gohir.D08G211201 Gossypium hirsutum HOM05D006778 ORTHO05D008341 2.5e-17 93.2 197 34.5
Thecc.01G232400 Theobroma cacao HOM05D006778 ORTHO05D008341 2.5e-17 93.2 208 32.7
EL10Ac7g17819 Beta vulgaris HOM05D006778 ORTHO05D008341 3.2e-17 92.8 191 35.1
Prupe.8G209000 Prunus persica HOM05D006778 ORTHO05D008341 3.2e-17 92.8 201 35.8
vmacro02733 Vaccinium macrocarpon HOM05D006778 ORTHO05D008341 3.2e-17 92.8 202 47.0
Glyma.13G130200 Glycine max HOM05D006778 ORTHO05D008341 4.2e-17 92.4 197 36.0
Lj5g0022938 Lotus japonicus HOM05D006778 ORTHO05D008341 9.5e-17 91.3 201 35.8
MD05G1182200 Malus domestica HOM05D006778 ORTHO05D008341 1.6e-16 90.5 200 35.0
RcHm_v2.0_Chr6g0285481 Rosa chinensis HOM05D006778 ORTHO05D008341 1.6e-16 90.5 201 37.3
ECA247G0226 Erigeron canadensis HOM05D000070 ORTHO05D003190 2.1e-16 90.1 194 36.1
Actinidia37573 Actinidia chinensis HOM05D006778 ORTHO05D008341 3.6e-16 89.4 206 34.5
SGA_v2.0_scaffold8G04666 Striga asiatica HOM05D006778 ORTHO05D008341 3.6e-16 89.4 192 33.9
GSVIVG01028519001 Vitis vinifera HOM05D006778 ORTHO05D008341 3.6e-16 89.4 194 34.0
Gorai.004G223900 Gossypium raimondii HOM05D006778 ORTHO05D008341 4.7e-16 89.0 209 32.5
Gohir.A08G193200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 8.0e-16 88.2 203 33.0
Nitab4.5_0003180g0010 Nicotiana tabacum HOM05D006778 ORTHO05D008341 1.0e-15 87.8 196 34.7
Potri.002G252700 Populus trichocarpa HOM05D006778 ORTHO05D008341 1.4e-15 87.4 190 35.8
Sabra02G0191900 Salix brachista HOM05D006778 ORTHO05D008341 2.3e-15 86.7 190 34.2
TPR.G33801 Trifolium pratense HOM05D006778 ORTHO05D008341 3.0e-15 86.3 193 36.3
COL.COLO4_28579 Corchorus olitorius HOM05D006778 ORTHO05D008341 5.2e-15 85.5 196 31.6
MELO3C026499.2 Cucumis melo HOM05D006778 ORTHO05D008341 5.2e-15 85.5 197 33.5
CAN.G941.43 Capsicum annuum HOM05D006778 ORTHO05D008341 6.8e-15 85.1 197 34.0
arahy.Tifrunner.gnm1.ann1.PE83GC Arachis hypogaea HOM05D006778 ORTHO05D008341 1.2e-14 84.3 198 31.8
Nitab4.5_0001740g0070 Nicotiana tabacum HOM05D006778 ORTHO05D008341 1.2e-14 84.3 196 35.2
ClCG07G001620 Citrullus lanatus HOM05D006778 ORTHO05D008341 1.5e-14 84.0 204 35.8
DCAR_012626 Daucus carota HOM05D006778 ORTHO05D008341 2.0e-14 83.6 196 33.7
Duzib133G1327 Durio zibethinus HOM05D006778 ORTHO05D008341 2.0e-14 83.6 207 30.4
Sed0012724 Sechium edule HOM05D006778 ORTHO05D008341 2.0e-14 83.6 198 34.3
arahy.Tifrunner.gnm1.ann1.01AYHN Arachis hypogaea HOM05D006778 ORTHO05D008341 2.6e-14 83.2 198 31.8
TAR362G0656 Trochodendron aralioides HOM05D006778 ORTHO05D008341 2.6e-14 83.2 195 33.3
Rhsim13G0042100 Rhododendron simsii HOM05D006778 ORTHO05D008341 5.7e-14 82.0 196 33.2
CANSAT01G3118 Cannabis sativa HOM05D006778 ORTHO05D008341 9.8e-14 81.3 198 35.4
Cc01_g17420 Coffea canephora HOM05D006778 ORTHO05D008341 9.8e-14 81.3 195 31.8
FAN24G1005 Fragaria x ananassa HOM05D006778 ORTHO05D008341 9.8e-14 81.3 215 29.8
Solyc06g008020.3 Solanum lycopersicum HOM05D006778 ORTHO05D008341 9.8e-14 81.3 196 33.2
CANSAT01G2408 Cannabis sativa HOM05D006778 ORTHO05D008341 1.7e-13 80.5 194 34.0
CsaV3_6G036140 Cucumis sativus L. HOM05D006778 ORTHO05D008341 1.7e-13 80.5 194 34.0
Pp3c19_5220 Physcomitrium patens HOM05D006778 ORTHO05D008341 3.7e-13 79.3 190 32.1
Psat6g064720 Pisum sativum HOM05D006778 ORTHO05D008341 4.9e-13 79.0 193 32.1
Medtr1g069150 Medicago truncatula HOM05D006778 ORTHO05D008341 6.3e-13 78.6 193 32.6
Nn1g03098 Nelumbo nucifera HOM05D006778 ORTHO05D008341 8.3e-13 78.2 204 32.4
Sopen06g002860 Solanum pennellii HOM05D006778 ORTHO05D008341 5.4e-12 75.5 196 30.1
PGR044G1830 Punica granatum HOM05D006778 ORTHO05D008341 7.0e-12 75.1 197 28.9
TWI14G0487 Tripterygium wilfordii HOM05D006778 ORTHO05D008341 1.2e-11 74.3 206 35.4
CDE07G0370 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 2.0e-11 73.6 201 31.3
ATR0787G018 Amborella trichopoda HOM05D006778 ORTHO05D008341 4.5e-11 72.4 189 28.0
Dinv19236 Davidia involucrata HOM05D006778 ORTHO05D008341 2.3e-10 70.1 165 50.3
SMO111G0074 Selaginella moellendorffii HOM05D006778 ORTHO05D008341 5.0e-10 68.9 202 29.2
Haze_24755 Corylus avellana HOM05D006778 ORTHO05D008341 1.5e-09 67.4 116 37.9
Haze_24757 Corylus avellana HOM05D006778 ORTHO05D008341 1.5e-09 67.4 116 37.9
PGR044G0410 Punica granatum HOM05D006778 ORTHO05D008341 4.3e-09 65.9 199 27.1
Aqoxy2G03836 Aquilegia oxysepala HOM05D006778 ORTHO05D008341 7.3e-09 65.1 193 27.5
Mapoly0102s0014 Marchantia polymorpha HOM05D006778 ORTHO05D008341 7.3e-09 65.1 198 28.8
CDE06G1811 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 1.2e-08 64.3 201 29.9
Hma1.2p1_1858F.1_g305520 Hydrangea macrophylla HOM05D006778 ORTHO05D008341 6.1e-08 62.0 51 56.9
MSTRG.18371 Avicennia marina HOM05D006778 ORTHO05D008341 1.8e-07 60.5 70 48.6
HPP92_014070 Vanilla planifolia HOM05D006778 ORTHO05D008341 1.8e-07 60.5 196 28.1
CSS0042066 Camellia sinensis var. sinensis HOM05D006778 ORTHO05D008341 2.3e-07 60.1 105 40.0
SalBow4G2567 Salvia bowleyana HOM05D006778 ORTHO05D008341 3.0e-07 59.7 52 59.6
VMungo0720G2677 Vigna mungo HOM05D006778 ORTHO05D008341 4.0e-07 59.3 49 61.2
Ca_09622_v3 Cicer arietinum L. HOM05D006778 ORTHO05D008341 1.2e-06 57.8 49 61.2
AUR62008897 Chenopodium quinoa HOM05D006778 ORTHO05D008341 3.4e-06 56.2 180 29.4
PGSC0003DMG400014691 Solanum tuberosum HOM05D006778 ORTHO05D008341 3.4e-06 56.2 210 28.6


User provided reference genes

Program Settings