Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p52870 Brassica napus HOM05D001352 ORTHO05D102603 2.2e-105 385.6 190 100.0
C04p26810 Brassica napus HOM05D001352 ORTHO05D001354 7.2e-27 124.8 167 53.3
BraA02t06003Z Brassica rapa HOM05D001352 ORTHO05D001354 3.9e-25 119.0 194 50.0
A09p19260 Brassica napus HOM05D001352 ORTHO05D001354 4.3e-24 115.5 167 51.5
BraA02t08062Z Brassica rapa HOM05D001352 ORTHO05D001354 1.3e-23 114.0 157 52.9
A10p29150 Brassica napus HOM05D001352 ORTHO05D001354 1.6e-23 113.6 157 52.2
A07p04010 Brassica napus HOM05D001352 ORTHO05D001354 4.5e-21 105.5 153 50.3
BraA07t28192Z Brassica rapa HOM05D001352 ORTHO05D001354 4.5e-21 105.5 159 51.6
BcaB03g16460 Brassica carinata HOM05D001352 ORTHO05D001354 5.0e-20 102.1 156 50.6
BcaC06g36222 Brassica carinata HOM05D001352 ORTHO05D001354 6.1e-18 95.1 153 48.4
C07p06370 Brassica napus HOM05D001352 ORTHO05D001354 6.1e-18 95.1 153 48.4
BolC7t41053H Brassica oleracea HOM05D001352 ORTHO05D001354 6.1e-18 95.1 153 48.4
A04p28730 Brassica napus HOM05D001352 ORTHO05D001354 3.7e-15 85.9 148 47.3
CARHR105110 Cardamine hirsuta HOM05D001352 ORTHO05D001354 4.8e-15 85.5 156 44.9
Sp3g30460 Schrenkiella parvula HOM05D001352 ORTHO05D001354 8.2e-15 84.7 156 45.5
AT2G13100 Arabidopsis thaliana HOM05D001352 ORTHO05D001354 3.1e-14 82.8 158 46.2
Carub.0003s2785 Capsella rubella HOM05D001352 ORTHO05D001354 1.0e-12 77.8 158 43.7
THA.LOC104808939 Tarenaya hassleriana HOM05D001352 ORTHO05D001354 1.3e-12 77.4 147 42.9
Aa31LG3G10500 Aethionema arabicum HOM05D001352 ORTHO05D001354 2.2e-12 76.6 148 43.2
BcaB01g02682 Brassica carinata HOM05D001352 ORTHO05D090426 6.1e-10 68.6 48 77.1
Thhalv10022662m.g Eutrema salsugineum HOM05D001352 ORTHO05D001354 3.0e-09 66.2 149 40.3
Potri.018G115000 Populus trichocarpa HOM05D001352 ORTHO05D001354 4.4e-08 62.4 152 38.8
Sabra18G0097800 Salix brachista HOM05D001352 ORTHO05D001354 1.3e-07 60.8 161 37.3
Ca_17004_v3 Cicer arietinum L. HOM05D001352 ORTHO05D001354 1.7e-07 60.5 190 35.3
Ciclev10008087m.g Citrus clementina HOM05D001352 ORTHO05D001354 2.2e-07 60.1 146 40.4
Glyma.09G096500 Glycine max HOM05D001352 ORTHO05D001354 2.2e-07 60.1 187 38.0
ECA234G1044 Erigeron canadensis HOM05D001352 ORTHO05D001354 2.8e-07 59.7 143 37.8
PGR102G2657 Punica granatum HOM05D001352 ORTHO05D001354 2.8e-07 59.7 156 39.7
Gohir.D06G050100 Gossypium hirsutum HOM05D001352 ORTHO05D001354 3.7e-07 59.3 151 39.1
Gorai.010G057000 Gossypium raimondii HOM05D001352 ORTHO05D001354 3.7e-07 59.3 151 39.1
Psat1g023040 Pisum sativum HOM05D001352 ORTHO05D001354 3.7e-07 59.3 190 35.3
CANSAT11G2569 Cannabis sativa HOM05D001352 ORTHO05D001354 4.8e-07 58.9 161 36.0
QL02p091134 Quercus lobata HOM05D001352 ORTHO05D001354 4.8e-07 58.9 147 37.4
Lj6g0009460 Lotus japonicus HOM05D001352 ORTHO05D001354 6.3e-07 58.5 173 37.6
Thecc.09G140200 Theobroma cacao HOM05D001352 ORTHO05D001354 8.2e-07 58.2 159 37.1
TPR.G31558 Trifolium pratense HOM05D001352 ORTHO05D001354 8.2e-07 58.2 177 36.2
Duzib150G0190 Durio zibethinus HOM05D001352 ORTHO05D001354 1.4e-06 57.4 155 40.0
Gohir.A06G051000 Gossypium hirsutum HOM05D001352 ORTHO05D001354 1.4e-06 57.4 151 38.4
COL.COLO4_24117 Corchorus olitorius HOM05D001352 ORTHO05D001354 2.4e-06 56.6 148 38.5
CiPaw.16G118200 Carya illinoinensis HOM05D001352 ORTHO05D001354 3.1e-06 56.2 150 38.0
TWI63G1801 Tripterygium wilfordii HOM05D001352 ORTHO05D001354 4.1e-06 55.8 168 36.3
Glyma.15G201400 Glycine max HOM05D001352 ORTHO05D001354 5.3e-06 55.5 183 36.6
Lalb_Chr11g0072981 Lupinus albus HOM05D001352 ORTHO05D001354 5.3e-06 55.5 171 33.9
Cfa020901 Carpinus fangiana HOM05D001352 ORTHO05D001354 7.0e-06 55.1 150 39.3
Duzib187G0384 Durio zibethinus HOM05D001352 ORTHO05D001354 7.0e-06 55.1 145 38.6
CAN.G551.20 Capsicum annuum HOM05D001352 ORTHO05D001354 9.1e-06 54.7 146 35.6


User provided reference genes

Program Settings