Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 3.3e-189 664.8 323 100.0
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 2.9e-169 598.6 323 92.3
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 2.9e-169 598.6 323 92.3
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 5.4e-168 594.3 323 91.6
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 3.5e-167 591.7 323 91.0
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 4.6e-167 591.3 323 91.0
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 9.9e-162 573.5 320 88.8
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 2.9e-161 572.0 322 87.9
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 3.8e-161 571.6 321 87.5
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 3.8e-161 571.6 322 87.6
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 1.2e-159 566.6 320 86.9
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 2.1e-156 555.8 320 84.1
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 2.6e-146 522.3 320 79.7
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 3.8e-145 518.5 320 78.4
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 2.9e-137 492.3 322 73.3
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 1.1e-136 490.3 317 74.8
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 2.1e-135 486.1 320 74.4
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 2.7e-135 485.7 319 73.4
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 3.5e-135 485.3 320 73.8
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 3.9e-134 481.9 319 73.0
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 6.7e-134 481.1 320 72.8
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 6.7e-134 481.1 321 74.5
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 8.7e-134 480.7 320 72.8
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 3.3e-133 478.8 319 71.2
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 5.7e-133 478.0 322 72.7
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 1.6e-132 476.5 319 71.2
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 2.1e-132 476.1 320 72.5
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 2.8e-132 475.7 319 70.8
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 2.8e-132 475.7 322 72.0
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 3.7e-132 475.3 320 72.2
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 3.7e-132 475.3 320 70.6
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 3.7e-132 475.3 318 70.4
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 4.8e-132 474.9 320 72.2
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 8.2e-132 474.2 319 70.8
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 1.1e-131 473.8 320 72.2
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 2.4e-131 472.6 319 72.7
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 4.1e-131 471.9 320 71.2
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 4.1e-131 471.9 324 71.0
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 4.1e-131 471.9 316 72.5
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 6.9e-131 471.1 322 70.5
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 1.2e-130 470.3 319 71.5
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 2.0e-130 469.5 320 70.9
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 2.6e-130 469.2 320 70.9
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.6e-130 469.2 320 72.2
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.4e-130 468.8 321 70.4
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.4e-130 468.8 321 70.4
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 4.5e-130 468.4 321 70.4
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 4.5e-130 468.4 320 70.9
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 7.6e-130 467.6 309 71.8
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 1.0e-129 467.2 321 70.1
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 1.3e-129 466.8 319 71.8
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.2e-129 466.1 321 70.1
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 3.8e-129 465.3 320 70.0
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 5.0e-129 464.9 319 71.5
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 1.4e-128 463.4 319 71.5
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 2.5e-128 462.6 342 67.3
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 3.2e-128 462.2 319 70.2
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 3.2e-128 462.2 319 71.2
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 7.2e-128 461.1 319 70.2
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 1.2e-127 460.3 319 69.3
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 3.6e-127 458.8 320 69.1
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 7.9e-127 457.6 319 69.9
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 3.0e-126 455.7 318 69.8
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 3.9e-126 455.3 319 69.6
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 1.5e-125 453.4 335 66.3
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 1.9e-125 453.0 314 69.1
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 4.3e-125 451.8 312 69.9
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 2.8e-124 449.1 318 67.6
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 4.8e-124 448.4 320 68.4
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 1.1e-123 447.2 343 67.1
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 4.1e-123 445.3 317 67.5
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 5.3e-123 444.9 318 68.9
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 1.2e-122 443.7 296 70.9
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 1.2e-122 443.7 316 66.8
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 4.5e-122 441.8 367 61.0
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 7.7e-122 441.0 315 67.0
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 1.3e-121 440.3 321 65.4
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 1.1e-120 437.2 321 65.4
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 1.4e-120 436.8 316 67.1
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 2.5e-120 436.0 321 64.8
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 1.2e-119 433.7 322 66.8
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 2.3e-118 429.5 315 65.7
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 1.1e-117 427.2 358 62.6
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 2.0e-117 426.4 320 63.8
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 3.7e-116 422.2 291 68.0
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 1.4e-115 420.2 320 64.4
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 1.8e-115 419.9 282 71.6
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 3.1e-115 419.1 315 64.1
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 1.5e-114 416.8 321 62.0
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 3.8e-113 412.1 312 64.1
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 7.9e-111 404.4 318 62.9
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 5.2e-110 401.7 321 64.5
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 4.2e-104 382.1 314 59.6
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 1.4e-99 367.1 247 70.4
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 2.2e-97 359.8 184 95.1
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 1.5e-93 347.1 311 54.3
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 3.1e-91 339.3 306 53.9
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 1.2e-90 337.4 230 71.7
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 1.7e-89 333.6 312 53.5
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 2.5e-88 329.7 316 54.1
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 3.0e-86 322.8 225 67.1
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 3.0e-78 296.2 224 63.8
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 2.0e-66 256.9 191 66.0
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 2.3e-65 253.4 254 48.8
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 3.5e-58 229.6 149 67.8
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 2.8e-55 219.9 145 72.4
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 1.4e-46 191.0 143 67.8
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 4.4e-45 186.0 139 68.3
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 6.4e-36 155.6 106 73.6
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 1.3e-33 147.9 97 75.3
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.7e-28 131.0 142 50.7
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 3.9e-25 119.8 359 27.0
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 9.6e-24 115.2 68 82.4
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 8.2e-23 112.1 73 76.7
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.0e-21 107.5 74 73.0
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 2.0e-21 107.5 311 26.0
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 2.6e-21 107.1 73 68.5
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 1.7e-20 104.4 348 25.6
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 3.7e-07 60.1 41 65.9


User provided reference genes

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