Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p44430 Brassica napus HOM05D003919 ORTHO05D004906 5.1e-57 224.2 111 100.0
BolC7t44964H Brassica oleracea HOM05D003919 ORTHO05D004906 6.6e-57 223.8 110 100.0
CARHR190420 Cardamine hirsuta HOM05D003919 ORTHO05D004906 1.2e-55 219.5 110 97.3
A03p46400 Brassica napus HOM05D003919 ORTHO05D004906 2.8e-55 218.4 110 98.2
BraA03t13766Z Brassica rapa HOM05D003919 ORTHO05D004906 2.8e-55 218.4 110 98.2
Sp2g24010 Schrenkiella parvula HOM05D003919 ORTHO05D004906 8.1e-55 216.9 110 97.3
Thhalv10003499m.g Eutrema salsugineum HOM05D003919 ORTHO05D004906 2.4e-54 215.3 110 96.4
Gohir.A12G134051 Gossypium hirsutum HOM05D003919 ORTHO05D004906 4.0e-54 214.5 109 95.4
AL6G34300 Arabidopsis lyrata HOM05D003919 ORTHO05D004906 5.2e-54 214.2 110 95.5
AT5G23110 Arabidopsis thaliana HOM05D003919 ORTHO05D004906 5.2e-54 214.2 110 95.5
Carub.0006s2090 Capsella rubella HOM05D003919 ORTHO05D004906 5.2e-54 214.2 110 95.5
Aa31LG11G2600 Aethionema arabicum HOM05D003919 ORTHO05D004906 6.8e-54 213.8 110 95.5
Thecc.02G160300 Theobroma cacao HOM05D003919 ORTHO05D004906 1.5e-53 212.6 109 95.4
Gohir.D12G137500 Gossypium hirsutum HOM05D003919 ORTHO05D004906 2.0e-53 212.2 109 94.5
Gorai.008G149000 Gossypium raimondii HOM05D003919 ORTHO05D004906 2.0e-53 212.2 109 94.5
COL.COLO4_13756 Corchorus olitorius HOM05D003919 ORTHO05D004906 7.6e-53 210.3 110 94.5
THA.LOC104819381 Tarenaya hassleriana HOM05D003919 ORTHO05D004906 1.3e-52 209.5 110 93.6
Duzib132G0455 Durio zibethinus HOM05D003919 ORTHO05D004906 2.9e-52 208.4 109 93.6
CiPaw.05G168700 Carya illinoinensis HOM05D003919 ORTHO05D004906 1.4e-51 206.1 109 90.8
Solyc02g014190.4 Solanum lycopersicum HOM05D003919 ORTHO05D004906 5.4e-51 204.1 109 89.9
Cc11_g02410 Coffea canephora HOM05D003919 ORTHO05D004906 9.2e-51 203.4 109 89.9
Atru.chr11.1166 Acer truncatum HOM05D003919 ORTHO05D004906 1.2e-50 203.0 108 90.7
Sopen02g003520 Solanum pennellii HOM05D003919 ORTHO05D004906 1.6e-50 202.6 109 89.0
CAN.G157.22 Capsicum annuum HOM05D003919 ORTHO05D004906 2.1e-50 202.2 109 89.0
Haze_11754 Corylus avellana HOM05D003919 ORTHO05D004906 2.1e-50 202.2 109 89.0
TWI53G0046 Tripterygium wilfordii HOM05D003919 ORTHO05D004906 2.7e-50 201.8 108 90.7
arahy.Tifrunner.gnm1.ann1.5S361I Arachis hypogaea HOM05D003919 ORTHO05D004906 1.7e-49 199.1 109 88.1
Cfa008737 Carpinus fangiana HOM05D003919 ORTHO05D004906 1.7e-49 199.1 109 88.1
arahy.Tifrunner.gnm1.ann1.FE7SUA Arachis hypogaea HOM05D003919 ORTHO05D004906 2.3e-49 198.7 109 87.2
GSVIVG01012044001 Vitis vinifera HOM05D003919 ORTHO05D004906 2.3e-49 198.7 109 88.1
Cpa.g.sc0.159 Carica papaya HOM05D003919 ORTHO05D004906 3.9e-49 198.0 109 86.2
ECA233G1217 Erigeron canadensis HOM05D003919 ORTHO05D004906 6.6e-49 197.2 109 88.1
Ah.01g012280 Amaranthus hybridus HOM05D003919 ORTHO05D004906 8.7e-49 196.8 108 88.0
Ciclev10030469m.g Citrus clementina HOM05D003919 ORTHO05D004906 8.7e-49 196.8 107 88.8
Lj6C719G10 Lonicera japonica HOM05D003919 ORTHO05D004906 8.7e-49 196.8 109 88.1
Actinidia04322 Actinidia chinensis HOM05D003919 ORTHO05D004906 1.1e-48 196.4 109 88.1
CSS0046709 Camellia sinensis var. sinensis HOM05D003919 ORTHO05D004906 1.1e-48 196.4 110 87.3
ClCG09G004560 Citrullus lanatus HOM05D003919 ORTHO05D004906 1.5e-48 196.1 110 86.4
RcHm_v2.0_Chr4g0446631 Rosa chinensis HOM05D003919 ORTHO05D004906 1.5e-48 196.1 109 89.0
Migut.J01108 Erythranthe guttata HOM05D003919 ORTHO05D004906 1.9e-48 195.7 107 87.9
FvH4_4g36870 Fragaria vesca HOM05D003919 ORTHO05D004906 1.9e-48 195.7 109 89.0
FAN12G0111 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.9e-48 195.7 109 89.0
FAN17G2968 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.9e-48 195.7 109 89.0
FAN22G1631 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.9e-48 195.7 109 89.0
HanXRQChr12g0366421 Helianthus annuus HOM05D003919 ORTHO05D004906 2.5e-48 195.3 108 88.0
Oeu055860.1 Olea europaea HOM05D003919 ORTHO05D004906 2.5e-48 195.3 108 89.8
SGA_v2.0_scaffold17G08205 Striga asiatica HOM05D003919 ORTHO05D004906 3.3e-48 194.9 108 88.0
AUR62015231 Chenopodium quinoa HOM05D003919 ORTHO05D004906 4.3e-48 194.5 109 85.3
AUR62017695 Chenopodium quinoa HOM05D003919 ORTHO05D004906 4.3e-48 194.5 109 85.3
MELO3C023597.2 Cucumis melo HOM05D003919 ORTHO05D004906 4.3e-48 194.5 110 86.4
CsaV3_7G030590 Cucumis sativus L. HOM05D003919 ORTHO05D004906 4.3e-48 194.5 110 86.4
MD16G1001800 Malus domestica HOM05D003919 ORTHO05D004906 4.3e-48 194.5 109 88.1
Hund24370 Selenicereus undatus HOM05D003919 ORTHO05D004906 4.3e-48 194.5 108 88.0
FAN07G2510 Fragaria x ananassa HOM05D003919 ORTHO05D004906 7.3e-48 193.7 109 88.1
FAN27G1315 Fragaria x ananassa HOM05D003919 ORTHO05D004906 7.3e-48 193.7 109 88.1
Lalb_Chr04g0258931 Lupinus albus HOM05D003919 ORTHO05D004906 7.3e-48 193.7 109 85.3
FAN14G1298 Fragaria x ananassa HOM05D003919 ORTHO05D004906 9.6e-48 193.4 109 88.1
Lsat_1_v5_gn_8_31660 Lactuca sativa HOM05D003919 ORTHO05D004906 9.6e-48 193.4 108 88.0
QL03p046003 Quercus lobata HOM05D003919 ORTHO05D004906 1.2e-47 193.0 105 89.5
Prupe.1G347000 Prunus persica HOM05D003919 ORTHO05D004906 2.1e-47 192.2 109 86.2
Sed0027848 Sechium edule HOM05D003919 ORTHO05D004906 2.1e-47 192.2 110 84.5
DCAR_026901 Daucus carota HOM05D003919 ORTHO05D004906 3.6e-47 191.4 109 85.3
FAN25G1432 Fragaria x ananassa HOM05D003919 ORTHO05D004906 4.7e-47 191.0 109 87.2
Eucgr.J00863 Eucalyptus grandis HOM05D003919 ORTHO05D004906 6.2e-47 190.7 108 85.2
Medtr1g037310 Medicago truncatula HOM05D003919 ORTHO05D004906 6.2e-47 190.7 109 85.3
VMungo0251G1503 Vigna mungo HOM05D003919 ORTHO05D004906 6.2e-47 190.7 109 85.3
Ca_25292_v3 Cicer arietinum L. HOM05D003919 ORTHO05D004906 8.1e-47 190.3 109 85.3
Glyma.20G003400 Glycine max HOM05D003919 ORTHO05D004906 8.1e-47 190.3 109 86.2
TPR.G8246 Trifolium pratense HOM05D003919 ORTHO05D004906 8.1e-47 190.3 109 85.3
Lj2g0026278 Lotus japonicus HOM05D003919 ORTHO05D004906 1.1e-46 189.9 109 84.4
Aqoxy3G04259 Aquilegia oxysepala HOM05D003919 ORTHO05D004906 1.8e-46 189.1 106 85.8
Psat6g099280 Pisum sativum HOM05D003919 ORTHO05D004906 1.8e-46 189.1 109 85.3
MBI03_g34501_MAGBIO Magnolia biondii HOM05D003919 ORTHO05D004906 3.1e-46 188.3 110 84.5
ATR0618G139 Amborella trichopoda HOM05D003919 ORTHO05D004906 1.2e-45 186.4 108 85.2
TAR374G0728 Trochodendron aralioides HOM05D003919 ORTHO05D004906 1.2e-45 186.4 110 83.6
Peaxi162Scf00363g00329 Petunia axillaris HOM05D003919 ORTHO05D004906 1.5e-45 186.0 108 85.2
Nn4g24949 Nelumbo nucifera HOM05D003919 ORTHO05D004906 4.4e-45 184.5 109 82.6
Potri.005G093000 Populus trichocarpa HOM05D003919 ORTHO05D004906 1.7e-44 182.6 108 85.2
PSO782G3793 Papaver somniferum HOM05D003919 ORTHO05D004906 2.9e-44 181.8 108 82.4
Sabra05G0077100 Salix brachista HOM05D003919 ORTHO05D004906 2.9e-44 181.8 108 84.3
HPP92_012883 Vanilla planifolia HOM05D000456 ORTHO05D004906 4.9e-44 181.0 108 79.6
PGR044G0490 Punica granatum HOM05D003919 ORTHO05D004906 6.4e-44 180.6 112 81.2
Os04g0675101 Oryza sativa ssp. japonica HOM05D003919 ORTHO05D004906 1.4e-43 179.5 107 81.3
Zm00001eb066370 Zea mays HOM05D003919 ORTHO05D004906 5.4e-43 177.6 107 81.3
SEGI_22186 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 7.1e-43 177.2 108 78.7
CDE08G0505 Ceratophyllum demersum HOM05D003919 ORTHO05D004906 1.2e-42 176.4 107 78.5
SMO164G0254 Selaginella moellendorffii HOM05D003919 ORTHO05D004906 2.7e-42 175.3 105 79.0
Pp3c9_15860 Physcomitrium patens HOM05D003919 ORTHO05D004906 1.7e-41 172.6 104 79.8
Mapoly0175s0011 Marchantia polymorpha HOM05D003919 ORTHO05D004906 3.3e-40 168.3 105 76.2
AagrBONN_evm.TU.Sc2ySwM_344.4345 Anthoceros agrestis HOM05D003919 ORTHO05D004906 6.2e-39 164.1 104 74.0
vmacro10895 Vaccinium macrocarpon HOM05D003919 ORTHO05D004906 9.0e-38 160.2 94 84.0
Nitab4.5_0000405g0040 Nicotiana tabacum HOM05D003919 ORTHO05D004906 2.0e-37 159.1 95 81.1
Nitab4.5_0003853g0020 Nicotiana tabacum HOM05D003919 ORTHO05D004906 2.0e-37 159.1 95 81.1
EL10Ac9g22945 Beta vulgaris HOM05D003919 ORTHO05D004906 3.4e-37 158.3 87 87.4
HPP92_012910 Vanilla planifolia HOM05D003919 ORTHO05D004906 3.4e-37 158.3 94 79.8
MCO02G364 Micromonas commoda HOM05D003919 ORTHO05D004906 5.4e-35 151.0 110 65.5
Cre01.g044850 Chlamydomonas reinhardtii HOM05D003919 ORTHO05D004906 1.3e-33 146.4 109 65.1
Sc06g0007940 Simmondsia chinensis HOM05D003919 ORTHO05D004906 7.6e-21 104.0 104 48.1
C07p44420 Brassica napus HOM05D003919 ORTHO05D004906 1.7e-20 102.8 104 48.1
Glyma.09G282200 Glycine max HOM05D003919 ORTHO05D004906 1.1e-19 100.1 104 47.1
COL.COLO4_13755 Corchorus olitorius HOM05D003919 ORTHO05D004906 1.4e-19 99.8 104 46.2
Manes.04G066100 Manihot esculenta HOM05D003919 ORTHO05D004906 1.4e-19 99.8 104 47.1
SEGI_11727 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 1.4e-19 99.8 104 46.2
SEGI_14080 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 1.4e-19 99.8 104 46.2
Gohir.A12G133950 Gossypium hirsutum HOM05D003919 ORTHO05D004906 1.9e-19 99.4 104 45.2
Rhsim09G0081500 Rhododendron simsii HOM05D003919 ORTHO05D004906 5.5e-19 97.8 104 45.2
HPP92_012909 Vanilla planifolia HOM05D003919 ORTHO05D004906 9.3e-19 97.1 104 44.2
TAR374G1487 Trochodendron aralioides HOM05D003919 ORTHO05D004906 1.2e-18 96.7 104 44.2
Lj6A719G43 Lonicera japonica HOM05D003919 ORTHO05D004906 2.7e-18 95.5 104 46.2
Dinv11717 Davidia involucrata HOM05D003919 ORTHO05D004906 6.0e-18 94.4 104 45.2
SEGI_33076 Sequoiadendron giganteum HOM05D003919 ORTHO05D004188 5.7e-16 87.8 89 46.1
Oeu055859.1 Olea europaea HOM05D003919 ORTHO05D004906 1.8e-14 82.8 92 42.4
FAN08G1746 Fragaria x ananassa HOM05D003919 ORTHO05D005006 4.5e-13 78.2 80 56.2
FvH4_5g39264 Fragaria vesca HOM05D000731 ORTHO05D004906 7.6e-13 77.4 45 84.4
Psat0s1455g0040 Pisum sativum HOM05D003919 ORTHO05D004906 2.1e-10 69.3 72 45.8
HPP92_012876 Vanilla planifolia HOM05D003919 ORTHO05D004906 1.4e-09 66.6 108 34.3
GSVIVG01014936001 Vitis vinifera HOM05D003919 ORTHO05D004906 1.4e-06 56.6 61 44.3


User provided reference genes

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