Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p42410 Brassica napus HOM05D008662 ORTHO05D010843 2.5e-86 322.0 154 100.0
BolC7t44768H Brassica oleracea HOM05D008662 ORTHO05D010843 2.5e-86 322.0 154 100.0
BcaNung02264 Brassica carinata HOM05D008662 ORTHO05D010843 2.0e-72 275.8 141 95.0
BraA06t26539Z Brassica rapa HOM05D008662 ORTHO05D010843 4.2e-62 241.5 121 93.4
C07p42350 Brassica napus HOM05D008662 ORTHO05D010843 1.2e-61 240.0 121 91.7
BolC7t44763H Brassica oleracea HOM05D005914 ORTHO05D007361 1.2e-61 240.0 121 91.7
A06p36170 Brassica napus HOM05D008662 ORTHO05D010843 2.2e-58 229.2 114 93.0
Sp2g22060 Schrenkiella parvula HOM05D008662 ORTHO05D010843 1.3e-42 176.8 117 71.8
BraA09t36259Z Brassica rapa HOM05D008662 ORTHO05D010843 6.4e-42 174.5 124 67.7
A02p39720 Brassica napus HOM05D008662 ORTHO05D010843 1.2e-40 170.2 121 66.1
BraA02t08937Z Brassica rapa HOM05D008662 ORTHO05D010843 2.1e-40 169.5 119 66.4
BcaB04g19788 Brassica carinata HOM05D008662 ORTHO05D010843 2.7e-40 169.1 124 65.3
Thhalv10004752m.g Eutrema salsugineum HOM05D008662 ORTHO05D010843 3.0e-39 165.6 120 68.3
C02p59500 Brassica napus HOM05D008662 ORTHO05D010843 8.6e-39 164.1 131 61.1
BolC2t12013H Brassica oleracea HOM05D008662 ORTHO05D010843 1.9e-38 162.9 133 60.9
AL6G37260 Arabidopsis lyrata HOM05D008662 ORTHO05D010843 6.2e-37 157.9 126 60.3
AT5G25470 Arabidopsis thaliana HOM05D008662 ORTHO05D010843 4.0e-36 155.2 113 63.7
CARHR000030 Cardamine hirsuta HOM05D008662 ORTHO05D010843 2.0e-35 152.9 119 61.3
Sp3g16060 Schrenkiella parvula HOM05D008662 ORTHO05D010843 3.7e-34 148.7 117 59.8
C05p48350 Brassica napus HOM05D008662 ORTHO05D010843 2.4e-33 146.0 120 59.2
BcaC05g28732 Brassica carinata HOM05D008662 ORTHO05D010843 5.4e-33 144.8 120 59.2
BolC5t33569H Brassica oleracea HOM05D008662 ORTHO05D010843 5.4e-33 144.8 120 59.2
A05p31860 Brassica napus HOM05D008662 ORTHO05D010843 9.2e-33 144.1 115 60.0
BraA05t22018Z Brassica rapa HOM05D008662 ORTHO05D010843 9.2e-33 144.1 115 60.0
AL6G37270 Arabidopsis lyrata HOM05D008662 ORTHO05D010843 6.0e-32 141.4 116 56.0
BcaB06g25856 Brassica carinata HOM05D008662 ORTHO05D010843 3.0e-31 139.0 122 56.6
AT5G25475 Arabidopsis thaliana HOM05D008662 ORTHO05D010843 6.6e-31 137.9 113 55.8
Carub.0006s2332 Capsella rubella HOM05D008662 ORTHO05D010843 4.3e-30 135.2 124 52.4
BcaB04g20807 Brassica carinata HOM05D008662 ORTHO05D010843 9.6e-30 134.0 118 53.4
BcaB04g20805 Brassica carinata HOM05D008662 ORTHO05D010843 2.1e-29 132.9 120 53.3
BcaC09g48756 Brassica carinata HOM05D008662 ORTHO05D010843 2.1e-29 132.9 120 53.3
C01p46230 Brassica napus HOM05D008662 ORTHO05D010843 2.1e-29 132.9 120 53.3
BolC1t04584H Brassica oleracea HOM05D008662 ORTHO05D010843 2.1e-29 132.9 120 53.3
BcaC01g03721 Brassica carinata HOM05D008662 ORTHO05D010843 6.2e-29 131.3 117 52.1
BolC3t17219H Brassica oleracea HOM05D008662 ORTHO05D010843 6.2e-29 131.3 117 52.1
BraA01t03711Z Brassica rapa HOM05D008662 ORTHO05D010843 6.2e-29 131.3 120 53.3
C03p49300 Brassica napus HOM05D008662 ORTHO05D010843 8.1e-29 131.0 117 52.1
BraA03t13204Z Brassica rapa HOM05D008662 ORTHO05D010843 1.1e-28 130.6 117 51.3
Thhalv10021356m.g Eutrema salsugineum HOM05D008662 ORTHO05D010843 1.8e-28 129.8 121 54.5
CARHR187920 Cardamine hirsuta HOM05D008662 ORTHO05D010843 4.0e-28 128.6 115 53.9
A01p36470 Brassica napus HOM05D008662 ORTHO05D010843 5.2e-28 128.3 120 52.5
Carub.0006s2333 Capsella rubella HOM05D008662 ORTHO05D010843 1.2e-27 127.1 110 54.5
BcaB04g18973 Brassica carinata HOM05D008662 ORTHO05D010843 1.5e-27 126.7 117 51.3
A03p40460 Brassica napus HOM05D008662 ORTHO05D010843 7.6e-27 124.4 117 49.6
Aa31LG11G4850 Aethionema arabicum HOM05D005914 ORTHO05D007361 3.3e-22 109.0 115 50.4
BcaB07g32200 Brassica carinata HOM05D008662 ORTHO05D010843 1.4e-12 77.0 56 64.3
THA.LOC104807272 Tarenaya hassleriana HOM05D006628 ORTHO05D000088 2.6e-11 72.8 106 34.9
C07p60560 Brassica napus HOM05D006628 ORTHO05D000088 6.4e-10 68.2 109 33.9
BolC7t46487H Brassica oleracea HOM05D006628 ORTHO05D000088 6.4e-10 68.2 109 33.9
AT4G34400 Arabidopsis thaliana HOM05D006628 ORTHO05D000088 8.4e-10 67.8 112 32.1
BcaC03g16172 Brassica carinata HOM05D006628 ORTHO05D000088 1.1e-09 67.4 116 34.5
A02p24960 Brassica napus HOM05D006628 ORTHO05D000088 1.1e-09 67.4 116 34.5
C02p39080 Brassica napus HOM05D006628 ORTHO05D000088 1.1e-09 67.4 116 34.5
BolC2t09918H Brassica oleracea HOM05D006628 ORTHO05D000088 1.1e-09 67.4 116 34.5
BraA02t07486Z Brassica rapa HOM05D006628 ORTHO05D000088 1.1e-09 67.4 116 34.5
Thhalv10026054m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 1.1e-09 67.4 113 31.9
A03p62870 Brassica napus HOM05D006628 ORTHO05D000088 1.4e-09 67.0 113 32.7
BraA03t15364Z Brassica rapa HOM05D006628 ORTHO05D000088 1.4e-09 67.0 113 32.7
Carub.0007s0593 Capsella rubella HOM05D006628 ORTHO05D000088 3.2e-09 65.9 112 31.2
Aa31LG7G14390 Aethionema arabicum HOM05D006628 ORTHO05D000088 4.2e-09 65.5 113 29.2
BolC1t00991H Brassica oleracea HOM05D006628 ORTHO05D000088 4.2e-09 65.5 144 30.6
BcaC09g51730 Brassica carinata HOM05D006628 ORTHO05D000088 5.5e-09 65.1 149 31.5
CARHR242370 Cardamine hirsuta HOM05D006628 ORTHO05D000088 5.5e-09 65.1 106 33.0
Thhalv10025812m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 9.3e-09 64.3 109 30.3
Thhalv10028696m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 9.3e-09 64.3 122 31.1
C01p16350 Brassica napus HOM05D006628 ORTHO05D000088 1.6e-08 63.5 105 31.4
Sp6g19410 Schrenkiella parvula HOM05D006628 ORTHO05D000088 1.6e-08 63.5 115 27.8
BolC1t01586H Brassica oleracea HOM05D006628 ORTHO05D000088 2.1e-08 63.2 105 31.4
THA.LOC104807340 Tarenaya hassleriana HOM05D006628 ORTHO05D000088 2.1e-08 63.2 115 31.3
A01p08580 Brassica napus HOM05D000106 ORTHO05D000160 2.7e-08 62.8 117 29.9
BraA01t00809Z Brassica rapa HOM05D006628 ORTHO05D000088 2.7e-08 62.8 117 29.9
BcaNung01328 Brassica carinata HOM05D006628 ORTHO05D000088 3.5e-08 62.4 117 29.9
A01p08840 Brassica napus HOM05D006628 ORTHO05D000088 3.5e-08 62.4 120 31.7
BraA01t00831Z Brassica rapa HOM05D006628 ORTHO05D000088 3.5e-08 62.4 120 31.7
Sp7g27330 Schrenkiella parvula HOM05D006628 ORTHO05D000088 3.5e-08 62.4 107 29.9
Aa31LG5G11590 Aethionema arabicum HOM05D006628 ORTHO05D000088 6.0e-08 61.6 105 30.5
BcaB05g23662 Brassica carinata HOM05D006628 ORTHO05D000088 1.3e-07 60.5 108 34.3
BcaC09g51706 Brassica carinata HOM05D006628 ORTHO05D000088 1.3e-07 60.5 118 29.7
Sp6g02680 Schrenkiella parvula HOM05D006628 ORTHO05D000088 1.3e-07 60.5 106 33.0
C01p10050 Brassica napus HOM05D006628 ORTHO05D000088 1.8e-07 60.1 119 31.1
A02p08270 Brassica napus HOM05D006628 ORTHO05D000088 2.3e-07 59.7 115 26.1
BraA02t05899Z Brassica rapa HOM05D006628 ORTHO05D000088 2.3e-07 59.7 115 26.1
CARHR271470 Cardamine hirsuta HOM05D006628 ORTHO05D000088 3.0e-07 59.3 106 30.2
Thhalv10014488m.g Eutrema salsugineum HOM05D009243 ORTHO05D011355 3.0e-07 59.3 119 31.9
A02p08260 Brassica napus HOM05D006628 ORTHO05D000088 3.9e-07 58.9 106 27.4
BraA02t05898Z Brassica rapa HOM05D006628 ORTHO05D000088 3.9e-07 58.9 106 27.4
BcaC08g43627 Brassica carinata HOM05D010232 ORTHO05D090808 5.1e-07 58.5 34 82.4
BcaNung06129 Brassica carinata HOM05D000765 ORTHO05D000613 6.7e-07 58.2 103 32.0
C01p10360 Brassica napus HOM05D006628 ORTHO05D000088 1.1e-06 57.4 141 29.8
AL7G16870 Arabidopsis lyrata HOM05D006628 ORTHO05D000088 1.5e-06 57.0 100 32.0
BraA01t01293Z Brassica rapa HOM05D006628 ORTHO05D000088 1.5e-06 57.0 96 32.3
AT5G57720 Arabidopsis thaliana HOM05D006628 ORTHO05D000088 3.3e-06 55.8 103 26.2
C02p13950 Brassica napus HOM05D006628 ORTHO05D000088 3.3e-06 55.8 106 26.4
BcaC03g14130 Brassica carinata HOM05D006628 ORTHO05D000088 4.3e-06 55.5 106 26.4
BolC2t07512H Brassica oleracea HOM05D006628 ORTHO05D000088 4.3e-06 55.5 106 26.4
BolC2t07514H Brassica oleracea HOM05D006628 ORTHO05D000088 4.3e-06 55.5 106 26.4
AL8G33760 Arabidopsis lyrata HOM05D006628 ORTHO05D000088 7.4e-06 54.7 104 27.9
BcaB05g22370 Brassica carinata HOM05D006628 ORTHO05D000088 7.4e-06 54.7 106 26.4


User provided reference genes

Program Settings