Gene: AT5G57720

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G57720
  • Transcript Identifier AT5G57720.1
  • Gene Type Coding gene
  • Location Chr5 : 23389927-23391526 : negative

Gene Family Information

  • ID HOM05D006628
  • #Genes/#Species 121/14
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G57720.1
  • uniprot Q9FHH1

Descriptions

  • Description AP2/B3-like transcriptional factor family protein
  • Computational description AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G06160.2); Has 295 Blast hits to 283 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 6; Plants - 282; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2000028
ISO
PLAZA Tree-based Orthologyregulation of photoperiodism, flowering AT3G53310

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Tree-based Orthologyprotein binding AT1G16640
GO:0043565
ISO
PLAZA Tree-based Orthologysequence-specific DNA binding AT3G53310

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003340 B3 DNA binding domain
IPR015300 DNA-binding pseudobarrel domain superfamily
Mapman id Description
15.5.5.2 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (REM)