Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p38360 Brassica napus HOM05D002427 ORTHO05D099609 1.8e-87 325.9 166 100.0
BraA02t04962Z Brassica rapa HOM05D002427 ORTHO05D002818 3.9e-13 79.0 102 49.0
C02p03680 Brassica napus HOM05D002427 ORTHO05D002818 8.8e-13 77.8 102 48.0
BolC2t06327H Brassica oleracea HOM05D002427 ORTHO05D002818 8.8e-13 77.8 102 48.0
SalBow5G1238 Salvia bowleyana HOM05D002427 ORTHO05D002818 8.2e-11 71.2 111 42.3
Thhalv10012870m.g Eutrema salsugineum HOM05D002427 ORTHO05D002818 1.8e-10 70.1 102 47.1
TPR.G28700 Trifolium pratense HOM05D002427 ORTHO05D002818 1.8e-10 70.1 128 35.9
Cfa002224 Carpinus fangiana HOM05D002427 ORTHO05D002818 4.1e-10 68.9 102 44.1
Sp6g34210 Schrenkiella parvula HOM05D002427 ORTHO05D002818 5.3e-10 68.6 102 44.1
Migut.L00555 Erythranthe guttata HOM05D002427 ORTHO05D002818 6.9e-10 68.2 111 42.3
Aqoxy5G02414 Aquilegia oxysepala HOM05D002427 ORTHO05D002818 9.1e-10 67.8 165 31.5
Haze_25401 Corylus avellana HOM05D002427 ORTHO05D002818 9.1e-10 67.8 87 48.3
FvH4_1g11350 Fragaria vesca HOM05D002427 ORTHO05D002818 9.1e-10 67.8 131 38.2
QL10p040252 Quercus lobata HOM05D002427 ORTHO05D002818 9.1e-10 67.8 102 46.1
CANSAT54G0435 Cannabis sativa HOM05D002427 ORTHO05D002818 1.2e-09 67.4 102 45.1
DCAR_012727 Daucus carota HOM05D002427 ORTHO05D002818 1.5e-09 67.0 165 32.1
FAN28G1337 Fragaria x ananassa HOM05D002427 ORTHO05D002818 1.5e-09 67.0 125 39.2
HanXRQChr11g0343541 Helianthus annuus HOM05D002427 ORTHO05D002818 1.5e-09 67.0 111 39.6
Oeu011019.1 Olea europaea HOM05D002427 ORTHO05D002818 1.5e-09 67.0 111 41.4
arahy.Tifrunner.gnm1.ann1.A2RU10 Arachis hypogaea HOM05D002427 ORTHO05D002818 2.0e-09 66.6 165 31.5
arahy.Tifrunner.gnm1.ann1.GNX9M7 Arachis hypogaea HOM05D002427 ORTHO05D002818 2.0e-09 66.6 165 31.5
CDE08G1546 Ceratophyllum demersum HOM05D002427 ORTHO05D002818 2.0e-09 66.6 102 46.1
Ca_17016_v3 Cicer arietinum L. HOM05D002427 ORTHO05D002818 2.0e-09 66.6 125 37.6
ECA248G0559 Erigeron canadensis HOM05D002427 ORTHO05D002818 2.0e-09 66.6 111 39.6
Lalb_Chr08g0237811 Lupinus albus HOM05D002427 ORTHO05D002818 2.0e-09 66.6 125 40.0
PRCOL_00004188 Prasinoderma coloniale HOM05D002427 ORTHO05D002818 2.0e-09 66.6 102 44.1
Aa31LG3G17890 Aethionema arabicum HOM05D002427 ORTHO05D002818 2.6e-09 66.2 102 43.1
Sed0011884 Sechium edule HOM05D002427 ORTHO05D002818 2.6e-09 66.2 165 32.1
Sopen04g007500 Solanum pennellii HOM05D002427 ORTHO05D002818 2.6e-09 66.2 102 46.1
PGSC0003DMG400027268 Solanum tuberosum HOM05D002427 ORTHO05D002818 2.6e-09 66.2 102 46.1
vmacro18681 Vaccinium macrocarpon HOM05D002427 ORTHO05D002818 2.6e-09 66.2 101 46.5
Lj1g0013321 Lotus japonicus HOM05D002427 ORTHO05D002818 3.4e-09 65.9 125 38.4
Medtr3g097250 Medicago truncatula HOM05D002427 ORTHO05D002818 3.4e-09 65.9 125 38.4
Prupe.7G172400 Prunus persica HOM05D002427 ORTHO05D002818 3.4e-09 65.9 102 43.1
TAR381G0395 Trochodendron aralioides HOM05D002427 ORTHO05D002818 3.4e-09 65.9 101 45.5
AT5G08650 Arabidopsis thaliana HOM05D002427 ORTHO05D002818 4.5e-09 65.5 102 44.1
Dinv05907 Davidia involucrata HOM05D002427 ORTHO05D002818 4.5e-09 65.5 111 41.4
Glyma.06G159400 Glycine max HOM05D002427 ORTHO05D002818 4.5e-09 65.5 125 39.2
Gohir.A05G375700 Gossypium hirsutum HOM05D002427 ORTHO05D002818 4.5e-09 65.5 165 31.5
Lsat_1_v5_gn_1_80721 Lactuca sativa HOM05D002427 ORTHO05D002818 4.5e-09 65.5 111 39.6
MBI03_g40054_MAGBIO Magnolia biondii HOM05D002427 ORTHO05D002818 4.5e-09 65.5 102 45.1
MD02G1127200 Malus domestica HOM05D002427 ORTHO05D002818 4.5e-09 65.5 102 43.1
MCO14G556 Micromonas commoda HOM05D002427 ORTHO05D002818 4.5e-09 65.5 124 38.7
VMungo1309G0797 Vigna mungo HOM05D002427 ORTHO05D002818 4.5e-09 65.5 125 39.2
Actinidia16534 Actinidia chinensis HOM05D002427 ORTHO05D002818 5.9e-09 65.1 125 37.6
CsaV3_4G029800 Cucumis sativus L. HOM05D002427 ORTHO05D002818 5.9e-09 65.1 102 43.1
Eucgr.L00739 Eucalyptus grandis HOM05D002427 ORTHO05D002818 5.9e-09 65.1 102 45.1
Glyma.04G206300 Glycine max HOM05D002427 ORTHO05D002818 5.9e-09 65.1 125 39.2
PGR102G2135 Punica granatum HOM05D002427 ORTHO05D002818 5.9e-09 65.1 102 45.1
RcHm_v2.0_Chr2g0098891 Rosa chinensis HOM05D002427 ORTHO05D002818 5.9e-09 65.1 102 43.1
Solyc04g015450.3 Solanum lycopersicum HOM05D002427 ORTHO05D002818 5.9e-09 65.1 102 46.1
HPP92_024255 Vanilla planifolia HOM05D002427 ORTHO05D002818 5.9e-09 65.1 102 44.1
HPP92_024266 Vanilla planifolia HOM05D002427 ORTHO05D002818 5.9e-09 65.1 102 44.1
ATR0684G052 Amborella trichopoda HOM05D002427 ORTHO05D002818 7.7e-09 64.7 102 44.1
Carub.0006s0764 Capsella rubella HOM05D002427 ORTHO05D002818 7.7e-09 64.7 102 43.1
Thecc.01G238700 Theobroma cacao HOM05D002427 ORTHO05D002818 7.7e-09 64.7 165 29.7
GSVIVG01022409001 Vitis vinifera HOM05D002427 ORTHO05D002818 7.7e-09 64.7 102 45.1
MELO3C003261.2 Cucumis melo HOM05D002427 ORTHO05D002818 1.0e-08 64.3 102 43.1
Duzib147G0870 Durio zibethinus HOM05D002427 ORTHO05D002818 1.0e-08 64.3 165 32.1
CAN.G676.46 Capsicum annuum HOM05D002427 ORTHO05D002818 1.3e-08 63.9 102 45.1
Ciclev10025061m.g Citrus clementina HOM05D002427 ORTHO05D002818 1.3e-08 63.9 102 45.1
Phvul.009G157100 Phaseolus vulgaris HOM05D002427 ORTHO05D002818 1.3e-08 63.9 102 43.1
TWI31G0626 Tripterygium wilfordii HOM05D002427 ORTHO05D002818 1.3e-08 63.9 165 29.7
AL6G19380 Arabidopsis lyrata HOM05D002427 ORTHO05D002818 1.7e-08 63.5 102 43.1
CiPaw.03G254700 Carya illinoinensis HOM05D002427 ORTHO05D002818 1.7e-08 63.5 102 42.2
Mapoly0067s0096 Marchantia polymorpha HOM05D002427 ORTHO05D002818 1.7e-08 63.5 102 44.1
PSO017G6250 Papaver somniferum HOM05D002427 ORTHO05D002818 1.7e-08 63.5 102 41.2
PSO170G1031 Papaver somniferum HOM05D002427 ORTHO05D002818 1.7e-08 63.5 102 41.2
CARHR204330 Cardamine hirsuta HOM05D002427 ORTHO05D002818 2.2e-08 63.2 102 42.2
FAN23G1666 Fragaria x ananassa HOM05D002427 ORTHO05D002818 2.2e-08 63.2 125 37.6
MBI03_g11148_MAGBIO Magnolia biondii HOM05D002427 ORTHO05D002818 2.2e-08 63.2 103 43.7
Sc09g0004380 Simmondsia chinensis HOM05D002427 ORTHO05D002818 2.2e-08 63.2 102 44.1
Zm00001eb207820 Zea mays HOM05D002427 ORTHO05D002818 2.2e-08 63.2 165 30.3
CDE02G4430 Ceratophyllum demersum HOM05D002427 ORTHO05D002818 2.9e-08 62.8 102 44.1
Cc07_g20240 Coffea canephora HOM05D002427 ORTHO05D002818 2.9e-08 62.8 125 37.6
Gohir.D04G040100 Gossypium hirsutum HOM05D002427 ORTHO05D002818 2.9e-08 62.8 102 43.1
Gorai.012G045200 Gossypium raimondii HOM05D002427 ORTHO05D002818 2.9e-08 62.8 102 43.1
Rhsim08G0000900 Rhododendron simsii HOM05D002427 ORTHO05D002818 3.8e-08 62.4 125 36.8
AUR62004792 Chenopodium quinoa HOM05D002427 ORTHO05D002818 5.0e-08 62.0 102 42.2
Potri.001G305300 Populus trichocarpa HOM05D002427 ORTHO05D002818 5.0e-08 62.0 102 42.2
AUR62039045 Chenopodium quinoa HOM05D002427 ORTHO05D002818 6.5e-08 61.6 102 41.2
Psat5g057760 Pisum sativum HOM05D002427 ORTHO05D002818 6.5e-08 61.6 125 36.0
Hund06883 Selenicereus undatus HOM05D002427 ORTHO05D002818 6.5e-08 61.6 102 40.2
Manes.13G078601 Manihot esculenta HOM05D002427 ORTHO05D002818 8.5e-08 61.2 165 29.7
Pp3c26_13410 Physcomitrium patens HOM05D002427 ORTHO05D002818 1.1e-07 60.8 102 40.2
THA.LOC104818410 Tarenaya hassleriana HOM05D002427 ORTHO05D002818 1.1e-07 60.8 102 40.2
CBR_g41196 Chara braunii HOM05D002427 ORTHO05D002818 1.4e-07 60.5 102 41.2
MSTRG.15260 Avicennia marina HOM05D002427 ORTHO05D002818 1.9e-07 60.1 111 38.7
Atru.chr4.1181 Acer truncatum HOM05D002427 ORTHO05D002818 2.5e-07 59.7 125 39.2
Ah.06g191700 Amaranthus hybridus HOM05D002427 ORTHO05D002818 4.2e-07 58.9 102 40.2
Sabra16G0191600 Salix brachista HOM05D002427 ORTHO05D002818 4.2e-07 58.9 102 43.1
SMO347G0398 Selaginella moellendorffii HOM05D002427 ORTHO05D002818 5.5e-07 58.5 102 42.2
AagrBONN_evm.TU.Sc2ySwM_344.3392 Anthoceros agrestis HOM05D002427 ORTHO05D002818 9.4e-07 57.8 128 32.8
Cre03.g165000 Chlamydomonas reinhardtii HOM05D002427 ORTHO05D002818 3.6e-06 55.8 102 35.3


User provided reference genes

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