Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p36730 Brassica napus HOM05D046801 ORTHO05D100950 5.1e-41 170.6 85 100.0
C08p40740 Brassica napus HOM05D046801 ORTHO05D099183 1.0e-25 119.8 64 93.8
C08p20990 Brassica napus HOM05D000041 ORTHO05D018737 3.4e-13 78.2 39 97.4
BcaB04g18746 Brassica carinata HOM05D003885 ORTHO05D004623 4.3e-08 61.2 42 76.2
BcaB06g25479 Brassica carinata HOM05D003885 ORTHO05D004623 4.3e-08 61.2 42 76.2
BcaC01g04006 Brassica carinata HOM05D003885 ORTHO05D004623 4.3e-08 61.2 42 76.2
A03p38080 Brassica napus HOM05D003885 ORTHO05D004623 4.3e-08 61.2 42 76.2
C01p51880 Brassica napus HOM05D003885 ORTHO05D004623 4.3e-08 61.2 42 76.2
C03p46210 Brassica napus HOM05D003885 ORTHO05D004623 4.3e-08 61.2 42 76.2
BolC1t05136H Brassica oleracea HOM05D003885 ORTHO05D004623 4.3e-08 61.2 42 76.2
BolC3t16892H Brassica oleracea HOM05D003885 ORTHO05D004623 4.3e-08 61.2 42 76.2
BraA03t12961Z Brassica rapa HOM05D003885 ORTHO05D004623 4.3e-08 61.2 42 76.2
Thhalv10021450m.g Eutrema salsugineum HOM05D003885 ORTHO05D004623 4.3e-08 61.2 42 73.8
A05p36370 Brassica napus HOM05D003885 ORTHO05D004623 1.7e-07 59.3 42 73.8
C05p54750 Brassica napus HOM05D003885 ORTHO05D004623 1.7e-07 59.3 42 73.8
BolC5t34149H Brassica oleracea HOM05D003885 ORTHO05D004623 1.7e-07 59.3 42 73.8
BraA05t22437Z Brassica rapa HOM05D003885 ORTHO05D004623 1.7e-07 59.3 42 73.8
A01p40350 Brassica napus HOM05D003885 ORTHO05D004623 2.2e-07 58.9 42 73.8
BraA01t04070Z Brassica rapa HOM05D003885 ORTHO05D004623 2.2e-07 58.9 42 73.8
Sp3g11380 Schrenkiella parvula HOM05D003885 ORTHO05D004623 3.7e-07 58.2 42 71.4
BcaB04g21002 Brassica carinata HOM05D003885 ORTHO05D004623 6.3e-07 57.4 42 71.4
AT3G13200 Arabidopsis thaliana HOM05D003885 ORTHO05D004623 1.4e-06 56.2 42 76.2
Carub.0003s1256 Capsella rubella HOM05D003885 ORTHO05D004623 1.4e-06 56.2 42 76.2
AL3G24950 Arabidopsis lyrata HOM05D003885 ORTHO05D004623 3.1e-06 55.1 42 73.8
CARHR087790 Cardamine hirsuta HOM05D003885 ORTHO05D004623 5.3e-06 54.3 42 73.8


User provided reference genes

Program Settings