Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p35950 Brassica napus HOM05D008305 ORTHO05D010625 4.0e-80 301.2 135 100.0
BolC7t44112H Brassica oleracea HOM05D008305 ORTHO05D010625 4.0e-80 301.2 135 100.0
BcaC06g31040 Brassica carinata HOM05D008305 ORTHO05D010625 6.6e-67 257.3 135 84.4
BcaC06g33883 Brassica carinata HOM05D008305 ORTHO05D010625 5.2e-64 247.7 135 84.4
C07p35920 Brassica napus HOM05D008305 ORTHO05D010625 2.0e-63 245.7 135 83.7
BolC7t44109H Brassica oleracea HOM05D008305 ORTHO05D010625 2.0e-63 245.7 135 83.7
BcaC06g33884 Brassica carinata HOM05D008305 ORTHO05D010625 9.8e-55 216.9 136 74.3
C07p35910 Brassica napus HOM05D008305 ORTHO05D010625 9.8e-55 216.9 136 74.3
BolC7t44108H Brassica oleracea HOM05D008305 ORTHO05D010625 9.8e-55 216.9 136 74.3
A06p41710 Brassica napus HOM05D008305 ORTHO05D010625 8.3e-54 213.8 136 73.5
Thhalv10005109m.g Eutrema salsugineum HOM05D008305 ORTHO05D010625 3.7e-46 188.3 136 64.7
Sp2g16000 Schrenkiella parvula HOM05D008305 ORTHO05D010625 6.0e-44 181.0 135 63.7
BolC7t44111H Brassica oleracea HOM05D008305 ORTHO05D010625 7.8e-44 180.6 136 66.2
A06p41680 Brassica napus HOM05D008305 ORTHO05D010625 8.6e-43 177.2 79 98.7
CARHR147930 Cardamine hirsuta HOM05D008305 ORTHO05D010625 1.1e-40 170.2 137 60.6
Carub.0005s0497 Capsella rubella HOM05D008305 ORTHO05D010625 7.6e-39 164.1 123 63.4
C07p35940 Brassica napus HOM05D008305 ORTHO05D010625 1.3e-38 163.3 104 69.2
AL4G15990 Arabidopsis lyrata HOM05D008305 ORTHO05D010625 4.1e-37 158.3 135 57.0
AL5G16640 Arabidopsis lyrata HOM05D008305 ORTHO05D010625 4.6e-36 154.8 123 58.5
Carub.0007s3551 Capsella rubella HOM05D008305 ORTHO05D010625 1.3e-35 153.3 136 53.7
AT3G27329 Arabidopsis thaliana HOM05D008305 ORTHO05D010625 2.3e-35 152.5 123 58.5
AT3G27331 Arabidopsis thaliana HOM05D008305 ORTHO05D010625 3.0e-35 152.1 124 58.1
Carub.0007s3550 Capsella rubella HOM05D008305 ORTHO05D010625 5.1e-35 151.4 136 55.9
AL5G17120 Arabidopsis lyrata HOM05D008305 ORTHO05D010625 2.5e-34 149.1 135 52.6
Carub.0005s0612 Capsella rubella HOM05D008305 ORTHO05D010625 4.3e-34 148.3 135 54.1
Thhalv10026776m.g Eutrema salsugineum HOM05D008305 ORTHO05D010625 4.3e-34 148.3 141 53.9
AT3G26860 Arabidopsis thaliana HOM05D008305 ORTHO05D010625 2.1e-33 146.0 115 60.9
Thhalv10005287m.g Eutrema salsugineum HOM05D008305 ORTHO05D010625 3.6e-33 145.2 134 52.2
Thhalv10005543m.g Eutrema salsugineum HOM05D008305 ORTHO05D010625 8.1e-33 144.1 137 53.3
Carub.0008s0200 Capsella rubella HOM05D008305 ORTHO05D010625 5.2e-32 141.4 138 52.9
Carub.0007s3549 Capsella rubella HOM05D008305 ORTHO05D010625 6.9e-32 141.0 138 52.9
AT3G27680 Arabidopsis thaliana HOM05D008305 ORTHO05D010625 1.3e-30 136.7 135 52.6
AL5G15840 Arabidopsis lyrata HOM05D008305 ORTHO05D010625 5.4e-29 131.3 136 49.3
CARHR147940 Cardamine hirsuta HOM05D008305 ORTHO05D010625 1.2e-28 130.2 135 50.4
Thhalv10026775m.g Eutrema salsugineum HOM05D008305 ORTHO05D010625 1.0e-27 127.1 141 47.5
Thhalv10026927m.g Eutrema salsugineum HOM05D008305 ORTHO05D010625 1.7e-27 126.3 136 50.7
AT3G26870 Arabidopsis thaliana HOM05D008305 ORTHO05D010625 2.3e-27 125.9 129 48.8
AL1G66430 Arabidopsis lyrata HOM05D008305 ORTHO05D010625 1.1e-26 123.6 98 59.2
CARHR147950 Cardamine hirsuta HOM05D008305 ORTHO05D010625 2.5e-26 122.5 116 53.4
C03p17120 Brassica napus HOM05D008305 ORTHO05D010625 4.8e-25 118.2 114 50.9
AT4G08560 Arabidopsis thaliana HOM05D000867 ORTHO05D012315 1.4e-24 116.7 92 65.2
Carub.0005s0618 Capsella rubella HOM05D008305 ORTHO05D010625 5.8e-23 111.3 98 50.0
BolC3t14126H Brassica oleracea HOM05D008305 ORTHO05D010625 2.2e-22 109.4 101 53.5
Carub.0093s0003 Capsella rubella HOM05D008305 ORTHO05D010625 4.9e-22 108.2 98 49.0
Carub.0005s0622 Capsella rubella HOM05D008305 ORTHO05D010625 6.4e-22 107.8 106 48.1
BcaC06g33880 Brassica carinata HOM05D001308 ORTHO05D001170 1.1e-21 107.1 47 97.9
AT2G24880 Arabidopsis thaliana HOM05D008305 ORTHO05D010625 1.1e-18 97.1 92 54.3
Aa31LG2G5710 Aethionema arabicum HOM05D008305 ORTHO05D010625 6.2e-17 91.3 104 45.2
CARHR147970 Cardamine hirsuta HOM05D008305 ORTHO05D002833 9.0e-16 87.4 118 41.5
AT3G26880 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 3.4e-15 85.5 118 42.4
AT1G28305 Arabidopsis thaliana HOM05D008305 ORTHO05D010625 9.9e-15 84.0 139 36.0
BcaB08g37417 Brassica carinata HOM05D003012 ORTHO05D002833 1.3e-14 83.6 143 35.0
A09p64370 Brassica napus HOM05D003012 ORTHO05D002833 1.7e-14 83.2 143 35.0
BraA09t41781Z Brassica rapa HOM05D003012 ORTHO05D002833 1.7e-14 83.2 143 35.0
BcaB08g37418 Brassica carinata HOM05D003012 ORTHO05D002833 2.2e-14 82.8 143 35.0
BcaB08g37419 Brassica carinata HOM05D003012 ORTHO05D002833 4.9e-14 81.6 143 34.3
C08p48000 Brassica napus HOM05D003012 ORTHO05D002833 8.4e-14 80.9 143 34.3
BolC8t52338H Brassica oleracea HOM05D003012 ORTHO05D002833 8.4e-14 80.9 143 34.3
Carub.0006s0330 Capsella rubella HOM05D003012 ORTHO05D002833 3.2e-13 79.0 119 35.3
AL5G15850 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 4.2e-13 78.6 119 40.3
BraA09t41780Z Brassica rapa HOM05D003012 ORTHO05D002833 4.2e-13 78.6 141 31.9
CARHR147960 Cardamine hirsuta HOM05D008305 ORTHO05D010625 4.2e-13 78.6 141 34.0
Sp1g10390 Schrenkiella parvula HOM05D003012 ORTHO05D002833 4.2e-13 78.6 142 33.1
A09p64360 Brassica napus HOM05D003012 ORTHO05D002833 5.5e-13 78.2 141 31.9
AT1G11765 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 7.1e-13 77.8 143 33.6
AL1G22950 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 1.6e-12 76.6 143 32.2
Aa31LG11G5250 Aethionema arabicum HOM05D013273 ORTHO05D002833 2.1e-12 76.3 69 44.9
AT5G04350 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 4.6e-12 75.1 118 34.7
BcaC07g41761 Brassica carinata HOM05D003012 ORTHO05D002833 7.9e-12 74.3 141 31.9
C08p47990 Brassica napus HOM05D003012 ORTHO05D002833 7.9e-12 74.3 141 31.9
BolC8t52337H Brassica oleracea HOM05D003012 ORTHO05D002833 1.0e-11 73.9 141 31.9
THA.LOC104806861 Tarenaya hassleriana HOM05D008305 ORTHO05D002833 1.0e-11 73.9 105 41.0
Sp6g38380 Schrenkiella parvula HOM05D003012 ORTHO05D002833 1.8e-11 73.2 96 39.6
Thhalv10005094m.g Eutrema salsugineum HOM05D008305 ORTHO05D010625 2.3e-11 72.8 146 35.6
CARHR208940 Cardamine hirsuta HOM05D003012 ORTHO05D002833 3.0e-11 72.4 134 32.8
BcaB04g19638 Brassica carinata HOM05D003012 ORTHO05D002833 5.1e-11 71.6 112 36.6
BcaC07g41762 Brassica carinata HOM05D003012 ORTHO05D002833 8.7e-11 70.9 129 31.8
Carub.0001s2675 Capsella rubella HOM05D008305 ORTHO05D010625 1.9e-10 69.7 120 35.8
Carub.0001s1143 Capsella rubella HOM05D008305 ORTHO05D002833 2.5e-10 69.3 123 33.3
BcaC06g32139 Brassica carinata HOM05D003012 ORTHO05D002833 9.6e-10 67.4 94 35.1
Thhalv10002162m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 1.3e-09 67.0 123 35.0
CARHR145180 Cardamine hirsuta HOM05D008305 ORTHO05D010625 1.6e-09 66.6 51 56.9
BcaC06g32140 Brassica carinata HOM05D003012 ORTHO05D002833 2.1e-09 66.2 94 35.1
C03p02010 Brassica napus HOM05D003012 ORTHO05D002833 2.8e-09 65.9 116 34.5
Thhalv10015869m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 4.8e-09 65.1 118 34.7
C09p72460 Brassica napus HOM05D003012 ORTHO05D002833 8.2e-09 64.3 139 30.2
Potri.003G175200 Populus trichocarpa HOM05D005430 ORTHO05D007814 8.2e-09 64.3 140 32.1
BcaB07g33307 Brassica carinata HOM05D003012 ORTHO05D002833 1.1e-08 63.9 102 38.2
Cpa.g.sc59.85 Carica papaya HOM05D005430 ORTHO05D007814 1.1e-08 63.9 137 32.8
A10p31770 Brassica napus HOM05D003012 ORTHO05D002833 1.4e-08 63.5 139 30.2
BraA10t45222Z Brassica rapa HOM05D003012 ORTHO05D002833 1.4e-08 63.5 139 30.2
BcaB01g05894 Brassica carinata HOM05D000149 ORTHO05D000076 1.8e-08 63.2 90 37.8
A03p01640 Brassica napus HOM05D000149 ORTHO05D000076 1.8e-08 63.2 90 37.8
BolC3t12754H Brassica oleracea HOM05D000149 ORTHO05D000076 1.8e-08 63.2 90 37.8
BraA03t09539Z Brassica rapa HOM05D000149 ORTHO05D000076 1.8e-08 63.2 90 37.8
THA.LOC104816675 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 2.4e-08 62.8 90 34.4
BolC9t59989H Brassica oleracea HOM05D003012 ORTHO05D002833 3.1e-08 62.4 111 30.6
Thhalv10022372m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 4.0e-08 62.0 113 31.0
THA.LOC104816439 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 4.0e-08 62.0 115 32.2
Aa31LG11G5110 Aethionema arabicum HOM05D000220 ORTHO05D000141 6.9e-08 61.2 97 34.0
AL5G15860 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 6.9e-08 61.2 62 45.2
THA.LOC104816435 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 6.9e-08 61.2 89 34.8
Aa31LG11G5230 Aethionema arabicum HOM05D013273 ORTHO05D015812 1.2e-07 60.5 119 32.8
AT4G29037 Arabidopsis thaliana HOM05D008344 ORTHO05D011034 2.0e-07 59.7 108 31.5
BcaNung05794 Brassica carinata HOM05D000149 ORTHO05D000076 2.6e-07 59.3 90 35.6
Ciclev10006174m.g Citrus clementina HOM05D005430 ORTHO05D007814 2.6e-07 59.3 149 30.9
Manes.03G153100 Manihot esculenta HOM05D005430 ORTHO05D007814 2.6e-07 59.3 133 28.6
C09p72440 Brassica napus HOM05D003012 ORTHO05D002833 4.5e-07 58.5 134 31.3
AL3G43730 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 7.6e-07 57.8 120 30.0
Manes.15G049100 Manihot esculenta HOM05D005430 ORTHO05D007814 1.7e-06 56.6 115 28.7
BolC4t27745H Brassica oleracea HOM05D003012 ORTHO05D002833 8.4e-06 54.3 93 31.2
Carub.0003s2793 Capsella rubella HOM05D003012 ORTHO05D002833 8.4e-06 54.3 95 33.7
FvH4_2g20680 Fragaria vesca HOM05D000256 ORTHO05D000119 8.4e-06 54.3 103 29.1


User provided reference genes

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