Gene: AT4G08560

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G08560
  • Transcript Identifier AT4G08560.1
  • Gene Type Coding gene
  • Location Chr4 : 5450434-5453183 : positive

Gene Family Information

  • ID HOM05D000867
  • #Genes/#Species 692/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G08560.1
  • symbol PUM15
  • Alias APUM15,pumilio 15
  • uniprot P0DN94

Descriptions

  • Description pumilio 15
  • Computational description pumilio 15 (PUM15); FUNCTIONS IN: RNA binding, binding; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Plant self-incompatibility S1 (InterPro:IPR010264), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 13 (TAIR:AT5G43090.1); Has 2363 Blast hits to 1592 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 534; Fungi - 743; Plants - 651; Viruses - 0; Other Eukaryotes - 435 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006417
IEA
GOA Databaseregulation of translation
GO:0060320
IEA
GOA Databaserejection of self pollen

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005576
IEA
GOA Databaseextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016024 Armadillo-type fold
IPR011989 Armadillo-like helical
IPR001313 Pumilio RNA-binding repeat
IPR010264 Plant self-incompatibility S1
IPR033712 Pumilio, RNA binding domain
Mapman id Description
35.1 not assigned.annotated