Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p35940 Brassica napus HOM05D008305 ORTHO05D010625 4.9e-66 254.2 119 100.0
BcaC06g33884 Brassica carinata HOM05D008305 ORTHO05D010625 1.3e-55 219.5 105 94.3
C07p35910 Brassica napus HOM05D008305 ORTHO05D010625 1.3e-55 219.5 105 94.3
BolC7t44108H Brassica oleracea HOM05D008305 ORTHO05D010625 1.3e-55 219.5 105 94.3
A06p41710 Brassica napus HOM05D008305 ORTHO05D010625 2.3e-55 218.8 105 95.2
BolC7t44111H Brassica oleracea HOM05D008305 ORTHO05D010625 5.3e-44 181.0 81 100.0
BcaC06g33883 Brassica carinata HOM05D008305 ORTHO05D010625 2.0e-43 179.1 105 77.1
C07p35920 Brassica napus HOM05D008305 ORTHO05D010625 2.0e-43 179.1 105 77.1
BolC7t44109H Brassica oleracea HOM05D008305 ORTHO05D010625 2.0e-43 179.1 105 77.1
BcaC06g31040 Brassica carinata HOM05D008305 ORTHO05D010625 5.8e-43 177.6 105 76.2
C07p35950 Brassica napus HOM05D008305 ORTHO05D010625 2.1e-37 159.1 104 69.2
BolC7t44112H Brassica oleracea HOM05D008305 ORTHO05D010625 2.1e-37 159.1 104 69.2
Sp2g16000 Schrenkiella parvula HOM05D008305 ORTHO05D010625 1.0e-34 150.2 103 63.1
Thhalv10005109m.g Eutrema salsugineum HOM05D008305 ORTHO05D010625 2.9e-34 148.7 118 58.5
Thhalv10005287m.g Eutrema salsugineum HOM05D008305 ORTHO05D010625 6.7e-31 137.5 96 63.5
Carub.0005s0497 Capsella rubella HOM05D008305 ORTHO05D010625 4.3e-30 134.8 105 60.0
CARHR147930 Cardamine hirsuta HOM05D008305 ORTHO05D010625 5.7e-30 134.4 120 53.3
AL5G16640 Arabidopsis lyrata HOM05D008305 ORTHO05D010625 7.4e-30 134.0 120 52.5
AT3G27329 Arabidopsis thaliana HOM05D008305 ORTHO05D010625 4.1e-28 128.3 106 56.6
AT3G27331 Arabidopsis thaliana HOM05D008305 ORTHO05D010625 4.5e-27 124.8 106 55.7
AL5G17120 Arabidopsis lyrata HOM05D008305 ORTHO05D010625 1.0e-26 123.6 103 56.3
Carub.0007s3551 Capsella rubella HOM05D008305 ORTHO05D010625 2.2e-26 122.5 104 54.8
AL1G66430 Arabidopsis lyrata HOM05D008305 ORTHO05D010625 6.5e-26 120.9 98 58.2
Carub.0007s3550 Capsella rubella HOM05D008305 ORTHO05D010625 3.2e-25 118.6 104 54.8
AT3G27680 Arabidopsis thaliana HOM05D008305 ORTHO05D010625 2.1e-24 115.9 104 55.8
AL4G15990 Arabidopsis lyrata HOM05D008305 ORTHO05D010625 1.0e-23 113.6 103 50.5
Thhalv10005543m.g Eutrema salsugineum HOM05D008305 ORTHO05D010625 1.8e-23 112.8 119 47.9
Thhalv10026776m.g Eutrema salsugineum HOM05D008305 ORTHO05D010625 3.9e-23 111.7 116 50.0
AT3G26860 Arabidopsis thaliana HOM05D008305 ORTHO05D010625 6.7e-23 110.9 87 60.9
Thhalv10026927m.g Eutrema salsugineum HOM05D008305 ORTHO05D010625 2.5e-22 109.0 96 55.2
AL5G15840 Arabidopsis lyrata HOM05D008305 ORTHO05D010625 2.2e-21 105.9 105 48.6
Carub.0008s0200 Capsella rubella HOM05D008305 ORTHO05D010625 2.2e-21 105.9 121 43.8
Carub.0005s0612 Capsella rubella HOM05D008305 ORTHO05D010625 2.8e-21 105.5 104 51.9
Carub.0007s3549 Capsella rubella HOM05D008305 ORTHO05D010625 3.1e-20 102.1 105 51.4
AT3G26870 Arabidopsis thaliana HOM05D008305 ORTHO05D010625 5.3e-20 101.3 105 46.7
C03p17120 Brassica napus HOM05D008305 ORTHO05D010625 5.3e-20 101.3 105 45.7
Carub.0005s0618 Capsella rubella HOM05D008305 ORTHO05D010625 7.7e-19 97.4 98 49.0
Carub.0093s0003 Capsella rubella HOM05D008305 ORTHO05D010625 2.2e-18 95.9 98 49.0
CARHR147950 Cardamine hirsuta HOM05D008305 ORTHO05D010625 2.2e-18 95.9 89 48.3
Thhalv10026775m.g Eutrema salsugineum HOM05D008305 ORTHO05D010625 3.8e-18 95.1 119 42.0
CARHR147940 Cardamine hirsuta HOM05D008305 ORTHO05D010625 3.2e-17 92.0 104 46.2
BolC3t14126H Brassica oleracea HOM05D008305 ORTHO05D010625 3.6e-16 88.6 82 48.8
Aa31LG2G5710 Aethionema arabicum HOM05D008305 ORTHO05D010625 1.4e-15 86.7 106 41.5
AT4G08560 Arabidopsis thaliana HOM05D000867 ORTHO05D012315 2.4e-12 75.9 60 60.0
Carub.0005s0622 Capsella rubella HOM05D008305 ORTHO05D010625 2.4e-12 75.9 73 49.3
BcaC06g33880 Brassica carinata HOM05D001308 ORTHO05D001170 2.2e-10 69.3 47 66.0
CARHR147970 Cardamine hirsuta HOM05D008305 ORTHO05D002833 2.2e-10 69.3 86 39.5
BcaB08g37417 Brassica carinata HOM05D003012 ORTHO05D002833 1.9e-09 66.2 111 33.3
THA.LOC104816680 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 1.9e-09 66.2 80 41.2
BcaB08g37418 Brassica carinata HOM05D003012 ORTHO05D002833 3.2e-09 65.5 111 33.3
BcaB08g37419 Brassica carinata HOM05D003012 ORTHO05D002833 3.2e-09 65.5 111 33.3
Carub.0006s0330 Capsella rubella HOM05D003012 ORTHO05D002833 3.2e-09 65.5 81 43.2
CARHR145180 Cardamine hirsuta HOM05D008305 ORTHO05D010625 3.2e-09 65.5 51 56.9
A09p64360 Brassica napus HOM05D003012 ORTHO05D002833 5.5e-09 64.7 104 33.7
A09p64370 Brassica napus HOM05D003012 ORTHO05D002833 5.5e-09 64.7 111 32.4
BraA09t41780Z Brassica rapa HOM05D003012 ORTHO05D002833 5.5e-09 64.7 104 33.7
BraA09t41781Z Brassica rapa HOM05D003012 ORTHO05D002833 5.5e-09 64.7 111 32.4
AT2G24880 Arabidopsis thaliana HOM05D008305 ORTHO05D010625 7.2e-09 64.3 75 46.7
A06p41680 Brassica napus HOM05D008305 ORTHO05D010625 7.2e-09 64.3 48 60.4
AT3G26880 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 2.7e-08 62.4 88 34.1
BcaC07g41762 Brassica carinata HOM05D003012 ORTHO05D002833 2.7e-08 62.4 111 31.5
C08p48000 Brassica napus HOM05D003012 ORTHO05D002833 2.7e-08 62.4 111 31.5
BolC8t52338H Brassica oleracea HOM05D003012 ORTHO05D002833 2.7e-08 62.4 111 31.5
THA.LOC104806861 Tarenaya hassleriana HOM05D008305 ORTHO05D002833 2.7e-08 62.4 88 35.2
CARHR012100 Cardamine hirsuta HOM05D008305 ORTHO05D002833 3.6e-08 62.0 113 30.1
AL5G15850 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 4.7e-08 61.6 84 39.3
BcaC06g32139 Brassica carinata HOM05D003012 ORTHO05D002833 6.1e-08 61.2 99 36.4
AT1G28305 Arabidopsis thaliana HOM05D008305 ORTHO05D010625 7.9e-08 60.8 99 33.3
THA.LOC104816675 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 7.9e-08 60.8 85 36.5
BcaC06g32140 Brassica carinata HOM05D003012 ORTHO05D002833 1.4e-07 60.1 99 36.4
Thhalv10005094m.g Eutrema salsugineum HOM05D008305 ORTHO05D010625 1.4e-07 60.1 84 38.1
AL3G43730 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 2.3e-07 59.3 85 36.5
AT5G04350 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 2.3e-07 59.3 80 38.8
BcaC07g41761 Brassica carinata HOM05D003012 ORTHO05D002833 2.3e-07 59.3 104 31.7
C08p47990 Brassica napus HOM05D003012 ORTHO05D002833 2.3e-07 59.3 104 31.7
Thhalv10002162m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 2.3e-07 59.3 90 35.6
BolC8t52337H Brassica oleracea HOM05D003012 ORTHO05D002833 3.0e-07 58.9 104 31.7
AL1G41880 Arabidopsis lyrata HOM05D008305 ORTHO05D010625 3.9e-07 58.5 99 33.3
BolC9t59989H Brassica oleracea HOM05D003012 ORTHO05D002833 3.9e-07 58.5 88 37.5
Aa31LG11G5250 Aethionema arabicum HOM05D013273 ORTHO05D002833 5.1e-07 58.2 59 44.1
BcaB01g05894 Brassica carinata HOM05D000149 ORTHO05D000076 6.7e-07 57.8 107 30.8
BcaC09g48088 Brassica carinata HOM05D003012 ORTHO05D002833 6.7e-07 57.8 82 39.0
A03p01640 Brassica napus HOM05D000149 ORTHO05D000076 6.7e-07 57.8 107 30.8
A10p31770 Brassica napus HOM05D003012 ORTHO05D002833 6.7e-07 57.8 88 36.4
C03p02010 Brassica napus HOM05D003012 ORTHO05D002833 6.7e-07 57.8 107 30.8
C09p72460 Brassica napus HOM05D003012 ORTHO05D002833 6.7e-07 57.8 88 36.4
BolC1t05395H Brassica oleracea HOM05D003012 ORTHO05D002833 6.7e-07 57.8 82 39.0
BolC3t12754H Brassica oleracea HOM05D000149 ORTHO05D000076 6.7e-07 57.8 107 30.8
BraA03t09539Z Brassica rapa HOM05D000149 ORTHO05D000076 6.7e-07 57.8 107 30.8
BraA10t45222Z Brassica rapa HOM05D003012 ORTHO05D002833 6.7e-07 57.8 88 36.4
AT2G24870 Arabidopsis thaliana HOM05D008305 ORTHO05D010625 8.8e-07 57.4 47 55.3
BcaB04g19638 Brassica carinata HOM05D003012 ORTHO05D002833 8.8e-07 57.4 81 38.3
Sp1g10390 Schrenkiella parvula HOM05D003012 ORTHO05D002833 8.8e-07 57.4 100 30.0
Thhalv10015869m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 1.5e-06 56.6 119 32.8
A06p47670 Brassica napus HOM05D004904 ORTHO05D002833 2.0e-06 56.2 106 34.0
BraA06t27634Z Brassica rapa HOM05D004904 ORTHO05D002833 2.0e-06 56.2 106 34.0
Sp6g38380 Schrenkiella parvula HOM05D003012 ORTHO05D002833 2.0e-06 56.2 58 41.4
THA.LOC104816440 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 3.3e-06 55.5 83 38.6
BcaNung05794 Brassica carinata HOM05D000149 ORTHO05D000076 7.4e-06 54.3 88 34.1
Thhalv10017589m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 7.4e-06 54.3 91 36.3
THA.LOC104816678 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 9.7e-06 53.9 76 35.5


User provided reference genes

Program Settings