Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p35880 Brassica napus HOM05D001038 ORTHO05D017617 8.6e-238 826.6 430 100.0
C06p26270 Brassica napus HOM05D001038 ORTHO05D017617 1.3e-196 689.9 430 85.8
BcaC06g33888 Brassica carinata HOM05D001038 ORTHO05D017617 2.5e-192 675.6 436 84.4
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 2.6e-149 532.7 460 67.0
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 6.0e-122 441.8 447 61.7
BcaC05g28246 Brassica carinata HOM05D001038 ORTHO05D031796 2.3e-105 386.7 454 52.6
C05p42760 Brassica napus HOM05D001038 ORTHO05D031796 4.3e-104 382.5 465 51.4
BcaC04g22192 Brassica carinata HOM05D001038 ORTHO05D017617 3.2e-91 339.7 306 64.7
BolC5t33003H Brassica oleracea HOM05D001038 ORTHO05D031796 7.1e-91 338.6 403 52.1
BolC1t01149H Brassica oleracea HOM05D001038 ORTHO05D017617 2.4e-86 323.6 243 72.0
C09p69750 Brassica napus HOM05D001038 ORTHO05D017617 1.5e-85 320.9 243 72.0
BolC2t07874H Brassica oleracea HOM05D001038 ORTHO05D010946 4.3e-80 302.8 458 44.8
BolC7t44104H Brassica oleracea HOM05D001038 ORTHO05D017617 3.8e-76 289.7 238 66.8
BcaC06g32416 Brassica carinata HOM05D001038 ORTHO05D017617 5.0e-76 289.3 342 54.7
BraA03t11730Z Brassica rapa HOM05D001038 ORTHO05D000395 9.4e-75 285.0 238 63.9
BcaB08g35558 Brassica carinata HOM05D001038 ORTHO05D000395 7.7e-69 265.4 477 41.5
BolC9t55139H Brassica oleracea HOM05D001038 ORTHO05D017617 8.8e-41 172.2 94 87.2
BcaC05g27501 Brassica carinata HOM05D001038 ORTHO05D032287 3.5e-37 160.2 425 34.1
BcaB06g28542 Brassica carinata HOM05D001038 ORTHO05D000395 4.5e-37 159.8 259 43.2
BolC6t36405H Brassica oleracea HOM05D001038 ORTHO05D032356 3.6e-34 150.2 213 43.7
BcaC08g43867 Brassica carinata HOM05D001038 ORTHO05D032356 4.7e-34 149.8 184 47.3
C06p12520 Brassica napus HOM05D001038 ORTHO05D032356 8.0e-34 149.1 256 39.1
BcaB01g01530 Brassica carinata HOM05D001038 ORTHO05D000395 6.8e-33 146.0 337 36.2
C05p34670 Brassica napus HOM05D001038 ORTHO05D032287 5.7e-32 142.9 380 34.7
BcaB07g32226 Brassica carinata HOM05D001038 ORTHO05D010946 1.3e-31 141.7 181 47.0
BcaB03g14886 Brassica carinata HOM05D001038 ORTHO05D010946 1.8e-30 137.9 245 40.4
BolC5t31712H Brassica oleracea HOM05D001038 ORTHO05D032287 3.3e-27 127.1 342 32.2
BolC6t37789H Brassica oleracea HOM05D001038 ORTHO05D039878 9.5e-27 125.6 97 73.2
BcaB06g28199 Brassica carinata HOM05D001038 ORTHO05D010946 3.6e-26 123.6 93 62.4
BcaB05g21586 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-22 111.3 243 35.8
BcaB01g01507 Brassica carinata HOM05D011654 ORTHO05D010946 2.5e-19 100.9 442 27.6
BcaB01g02416 Brassica carinata HOM05D011654 ORTHO05D010946 5.6e-19 99.8 498 26.5
BcaB07g31666 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-17 95.5 174 36.8
BcaC09g49302 Brassica carinata HOM05D034069 ORTHO05D032851 5.8e-16 89.7 233 30.9
BcaB08g36238 Brassica carinata HOM05D011654 ORTHO05D010946 7.8e-13 79.3 158 33.5
BcaB06g27190 Brassica carinata HOM05D011654 ORTHO05D010946 1.3e-12 78.6 127 39.4
BcaB07g33657 Brassica carinata HOM05D000428 ORTHO05D000582 1.3e-12 78.6 427 26.0
C05p38700 Brassica napus HOM05D037879 ORTHO05D027353 1.7e-12 78.2 96 40.6
BolC9t59719H Brassica oleracea HOM05D001038 ORTHO05D032864 2.5e-11 74.3 42 83.3
BcaC05g27869 Brassica carinata HOM05D011654 ORTHO05D027353 6.2e-10 69.7 85 41.2
C03p52320 Brassica napus HOM05D001038 ORTHO05D032864 1.5e-08 65.1 42 69.0
BcaB07g32821 Brassica carinata HOM05D001038 ORTHO05D039878 2.6e-08 64.3 41 68.3
BcaC01g05566 Brassica carinata HOM05D023990 ORTHO05D032040 3.4e-08 63.9 433 23.3
BcaB05g23741 Brassica carinata HOM05D000373 ORTHO05D000395 5.8e-08 63.2 177 29.9
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 9.9e-08 62.4 42 66.7
BcaB01g00732 Brassica carinata HOM05D011654 ORTHO05D010946 1.3e-07 62.0 100 30.0
BcaB04g17619 Brassica carinata HOM05D011654 ORTHO05D010946 1.3e-07 62.0 116 37.1
BolC9t56009H Brassica oleracea HOM05D020314 ORTHO05D032005 2.9e-07 60.8 152 32.2
BcaC04g21459 Brassica carinata HOM05D020314 ORTHO05D032005 4.9e-07 60.1 152 32.2
C09p31530 Brassica napus HOM05D020314 ORTHO05D032005 4.9e-07 60.1 152 32.2
BcaB06g27191 Brassica carinata HOM05D001038 ORTHO05D010946 1.4e-06 58.5 44 65.9
BcaB06g26345 Brassica carinata HOM05D011654 ORTHO05D010946 3.2e-06 57.4 98 27.6
BcaB06g28541 Brassica carinata HOM05D001038 ORTHO05D092600 3.2e-06 57.4 64 42.2
BolC2t11347H Brassica oleracea HOM05D001038 ORTHO05D000395 4.1e-06 57.0 41 58.5


User provided reference genes

Program Settings