Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p32640 Brassica napus HOM05D024909 ORTHO05D014433 6.7e-66 253.8 124 100.0
C01p38230 Brassica napus HOM05D024909 ORTHO05D014433 2.2e-21 105.9 88 64.8
BolC1t03785H Brassica oleracea HOM05D024909 ORTHO05D014433 1.2e-19 100.1 86 62.8
AT2G34320 Arabidopsis thaliana HOM05D000003 ORTHO05D001091 6.8e-18 94.4 114 41.2
AT5G38920 Arabidopsis thaliana HOM05D024909 ORTHO05D014433 7.5e-17 90.9 105 41.9
Thhalv10003060m.g Eutrema salsugineum HOM05D000003 ORTHO05D014433 4.8e-16 88.2 107 39.3
BraA07t27901Z Brassica rapa HOM05D000003 ORTHO05D014433 6.3e-16 87.8 119 37.0
AT4G29090 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 2.4e-15 85.9 117 33.3
BolC8t47524H Brassica oleracea HOM05D000003 ORTHO05D000004 2.7e-14 82.4 124 35.5
BolC4t22740H Brassica oleracea HOM05D000003 ORTHO05D001498 2.5e-12 75.9 112 35.7
BolC8t50384H Brassica oleracea HOM05D000003 ORTHO05D001091 3.2e-12 75.5 116 35.3
BolC4t22723H Brassica oleracea HOM05D000003 ORTHO05D014433 4.2e-12 75.1 112 35.7
AT5G42965 Arabidopsis thaliana HOM05D000003 ORTHO05D014433 2.7e-11 72.4 106 35.8
BcaB02g07083 Brassica carinata HOM05D000003 ORTHO05D014433 4.7e-11 71.6 113 34.5
BolC4t22716H Brassica oleracea HOM05D000003 ORTHO05D014433 6.1e-11 71.2 112 35.7
Aa31LG2G13330 Aethionema arabicum HOM05D000003 ORTHO05D001091 1.4e-10 70.1 120 31.7
Aa31sc222G90 Aethionema arabicum HOM05D000003 ORTHO05D001091 6.8e-10 67.8 120 30.0
Aa31LG11G8620 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-09 67.0 119 29.4
BcaC05g28305 Brassica carinata HOM05D000003 ORTHO05D001091 1.2e-09 67.0 114 32.5
Aa31LG3G3940 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.4e-09 65.5 108 33.3
Aa31LG5G21780 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.4e-09 65.5 122 32.0
C04p18640 Brassica napus HOM05D024909 ORTHO05D014433 4.4e-09 65.1 62 48.4
Aa31sc128G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.7e-09 64.7 120 30.0
Aa31sc248G50 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.7e-09 64.7 120 30.0
Aa31LG10G16810 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.3e-08 63.5 120 29.2
Aa31LG6G6890 Aethionema arabicum HOM05D000003 ORTHO05D001091 1.3e-08 63.5 120 28.3
Aa31sc51G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.3e-08 63.5 108 30.6
BolC3t17845H Brassica oleracea HOM05D000003 ORTHO05D014433 1.3e-08 63.5 66 45.5
BolC7t41032H Brassica oleracea HOM05D000003 ORTHO05D000004 1.3e-08 63.5 111 32.4
BolC5t32565H Brassica oleracea HOM05D001350 ORTHO05D001091 1.7e-08 63.2 112 30.4
Aa31sc729G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-08 62.8 120 28.3
Aa31LG11G5340 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.3e-08 60.8 120 31.7
Aa31sc17G80 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-07 60.5 119 26.1
Aa31sc320G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-07 60.1 108 27.8
Aa31sc407G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.1e-07 58.9 123 29.3
Aa31sc44G20 Aethionema arabicum HOM05D000003 ORTHO05D001091 3.1e-07 58.9 120 28.3
BolC1t03108H Brassica oleracea HOM05D001350 ORTHO05D001091 4.1e-07 58.5 112 28.6
Aa31LG9G15190 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.4e-07 58.2 115 28.7
Aa31LG9G9420 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.4e-07 58.2 124 31.5
Aa31LG1G4180 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.2e-07 57.4 120 33.3
BcaC08g45914 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-06 57.0 107 27.1
A06p35120 Brassica napus HOM05D001350 ORTHO05D001091 1.2e-06 57.0 94 30.9
BolC2t08784H Brassica oleracea HOM05D001350 ORTHO05D001091 1.2e-06 57.0 97 33.0
BraA06t26432Z Brassica rapa HOM05D001350 ORTHO05D001091 1.2e-06 57.0 94 30.9
C02p28310 Brassica napus HOM05D001350 ORTHO05D001091 1.6e-06 56.6 112 27.7
C01p31730 Brassica napus HOM05D001350 ORTHO05D001091 2.7e-06 55.8 112 28.6
BolC4t23016H Brassica oleracea HOM05D001350 ORTHO05D001091 3.5e-06 55.5 112 27.7
BolC4t21940H Brassica oleracea HOM05D001350 ORTHO05D001091 4.5e-06 55.1 112 27.7


User provided reference genes

Program Settings