Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 7.7e-283 976.5 493 100.0
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 7.7e-283 976.5 493 100.0
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 1.5e-273 945.7 493 97.6
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 1.6e-256 889.0 510 90.8
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 8.9e-247 856.7 526 85.9
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 1.0e-234 816.6 506 84.0
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 1.3e-234 816.2 506 84.2
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 1.9e-233 812.4 506 82.4
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 3.6e-232 808.1 504 82.7
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 1.8e-231 805.8 499 83.4
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 3.4e-230 801.6 497 83.1
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 4.5e-230 801.2 497 83.1
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 6.7e-226 787.3 506 80.6
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 1.5e-225 786.2 506 79.6
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 2.5e-225 785.4 506 80.4
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 3.1e-223 778.5 504 79.6
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 1.1e-207 726.9 504 74.8
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 1.4e-207 726.5 504 76.2
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 2.7e-179 632.5 358 87.4
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 1.0e-178 630.6 474 67.3
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 2.0e-153 546.6 280 95.0
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 3.0e-149 532.7 519 56.6
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 5.6e-148 528.5 524 55.7
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 3.1e-146 522.7 539 54.7
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 2.6e-145 519.6 537 53.1
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 3.4e-145 519.2 518 54.1
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 3.4e-145 519.2 539 53.1
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 4.4e-145 518.8 538 53.0
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 7.5e-145 518.1 519 55.3
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 9.8e-145 517.7 521 55.5
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 1.3e-144 517.3 511 55.6
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 8.3e-144 514.6 505 55.0
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 1.9e-143 513.5 533 54.0
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 3.2e-143 512.7 550 51.5
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 3.2e-143 512.7 516 53.9
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 9.2e-143 511.1 516 55.2
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 6.0e-142 508.4 484 55.8
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 1.3e-141 507.3 507 53.1
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.7e-141 506.9 523 52.6
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 3.9e-141 505.8 536 52.4
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 5.1e-141 505.4 518 53.5
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 6.6e-141 505.0 508 54.3
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 8.6e-141 504.6 508 54.5
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 1.5e-140 503.8 515 54.2
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 3.3e-140 502.7 531 51.8
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 5.6e-140 501.9 508 54.3
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 5.6e-140 501.9 528 52.1
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 7.3e-140 501.5 505 54.3
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 1.6e-139 500.4 530 51.1
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 2.1e-139 500.0 511 52.1
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 8.1e-139 498.0 528 54.5
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 1.4e-138 497.3 547 49.5
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 2.3e-138 496.5 532 52.4
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 3.1e-138 496.1 504 52.6
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 3.1e-138 496.1 542 52.2
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 1.2e-137 494.2 546 50.9
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 1.2e-137 494.2 498 53.0
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 2.0e-137 493.4 580 49.0
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 2.6e-137 493.0 516 53.1
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 4.4e-137 492.3 524 52.1
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 7.5e-137 491.5 504 53.4
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 2.9e-136 489.6 503 53.1
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 4.9e-136 488.8 530 51.1
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 1.4e-135 487.3 484 53.3
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 1.4e-135 487.3 494 53.8
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 1.9e-135 486.9 542 50.0
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 1.9e-135 486.9 500 55.0
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 2.4e-135 486.5 507 54.2
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 3.2e-135 486.1 486 53.9
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 2.1e-134 483.4 547 49.7
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 2.7e-134 483.0 597 48.9
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 3.5e-134 482.6 511 53.0
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 1.5e-132 477.2 433 57.7
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 2.5e-132 476.5 487 53.6
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 6.8e-130 468.4 455 54.5
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 1.2e-129 467.6 480 53.1
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 7.6e-129 464.9 408 58.1
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 9.9e-129 464.5 451 54.8
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 9.2e-127 458.0 496 50.4
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 9.2e-127 458.0 582 47.1
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 3.5e-126 456.1 532 50.0
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 6.0e-126 455.3 503 52.3
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 6.0e-126 455.3 515 49.1
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 1.3e-125 454.1 547 49.0
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 5.1e-125 452.2 534 49.1
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 8.1e-123 444.9 462 53.5
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 4.0e-122 442.6 397 59.2
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 1.2e-118 431.0 502 47.4
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 2.7e-118 429.9 468 51.7
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 1.9e-116 423.7 213 97.2
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 7.3e-116 421.8 506 50.0
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.5e-113 414.1 500 48.4
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 2.6e-113 413.3 456 51.1
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 4.5e-113 412.5 530 48.1
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 4.2e-111 406.0 470 48.5
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 1.0e-109 401.4 310 65.5
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 7.4e-108 395.2 376 55.6
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 5.8e-105 385.6 548 41.8
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 3.8e-104 382.9 251 71.7
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 1.2e-97 361.3 529 41.4
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 4.5e-97 359.4 537 41.5
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 4.9e-96 355.9 215 88.4
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 3.0e-85 320.1 250 68.4
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 3.9e-85 319.7 428 45.3
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 2.2e-83 313.9 289 59.5
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 1.1e-82 311.6 255 59.6
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 5.3e-82 309.3 376 50.5
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 2.1e-78 297.4 215 66.5
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 1.1e-71 275.0 458 37.6
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 5.7e-52 209.5 244 43.9
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 8.3e-51 205.7 150 78.0
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 4.1e-50 203.4 479 29.0
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 1.8e-45 188.0 121 74.4
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 8.3e-35 152.5 162 48.8
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 5.4e-34 149.8 213 44.1
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 6.8e-29 132.9 106 63.2
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 3.7e-27 127.1 266 36.1
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 2.5e-23 114.4 319 28.8
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 1.5e-20 105.1 184 35.9
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 1.9e-18 98.2 109 45.9
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 3.9e-16 90.5 166 35.5
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 6.6e-16 89.7 101 44.6
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 7.3e-15 86.3 192 34.4
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 1.1e-13 82.4 155 36.1
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 1.4e-13 82.0 41 90.2
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 2.6e-12 77.8 65 56.9
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 1.7e-11 75.1 39 87.2
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 1.7e-11 75.1 183 33.3
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 7.1e-10 69.7 198 32.3
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 2.7e-09 67.8 83 42.2
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.0e-08 65.9 111 36.9
Lj2A91G56 Lonicera japonica HOM05D005865 ORTHO05D006867 6.2e-06 56.6 36 69.4


User provided reference genes

Program Settings