Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p19510 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-73 279.6 131 100.0
BolC7t42469H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-31 140.2 68 100.0
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 1.4e-26 123.2 96 62.5
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 5.1e-24 114.8 96 59.4
C05p36690 Brassica napus HOM05D001038 ORTHO05D000395 1.9e-23 112.8 96 58.3
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 1.9e-23 112.8 96 58.3
C03p34550 Brassica napus HOM05D001038 ORTHO05D040320 2.5e-23 112.5 69 81.2
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 5.6e-23 111.3 95 57.9
BraA04t18197Z Brassica rapa HOM05D001038 ORTHO05D000395 3.7e-22 108.6 90 58.9
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 6.2e-22 107.8 95 56.8
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 6.2e-22 107.8 95 56.8
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 1.4e-21 106.7 95 55.8
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 2.4e-21 105.9 95 56.8
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 2.4e-21 105.9 95 56.8
BolC8t47295H Brassica oleracea HOM05D001038 ORTHO05D000395 5.3e-21 104.8 87 56.3
BolC3t15766H Brassica oleracea HOM05D001038 ORTHO05D040320 6.9e-21 104.4 69 78.3
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 6.9e-21 104.4 95 56.8
C07p11750 Brassica napus HOM05D001038 ORTHO05D000395 9.0e-21 104.0 104 52.9
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 1.2e-20 103.6 99 52.5
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 1.2e-20 103.6 99 52.5
BolC7t41648H Brassica oleracea HOM05D001038 ORTHO05D000395 2.0e-20 102.8 102 52.9
BolC8t49550H Brassica oleracea HOM05D001038 ORTHO05D000395 1.7e-19 99.8 87 56.3
A06p26760 Brassica napus HOM05D001038 ORTHO05D000395 2.2e-19 99.4 95 53.7
BolC7t41881H Brassica oleracea HOM05D001038 ORTHO05D000395 2.2e-19 99.4 96 49.0
BcaB04g19295 Brassica carinata HOM05D001038 ORTHO05D000395 2.9e-19 99.0 97 49.5
BolC7t43509H Brassica oleracea HOM05D001038 ORTHO05D000395 2.9e-19 99.0 98 49.0
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 3.8e-19 98.6 98 53.1
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 3.8e-19 98.6 90 54.4
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 4.9e-19 98.2 93 51.6
BcaC03g15415 Brassica carinata HOM05D001038 ORTHO05D000395 4.9e-19 98.2 90 54.4
BolC6t36762H Brassica oleracea HOM05D001038 ORTHO05D000395 6.5e-19 97.8 90 54.4
BraA06t25413Z Brassica rapa HOM05D001038 ORTHO05D000395 6.5e-19 97.8 93 52.7
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 8.4e-19 97.4 94 52.1
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 8.4e-19 97.4 93 50.5
C02p45440 Brassica napus HOM05D001038 ORTHO05D000395 8.4e-19 97.4 93 52.7
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 8.4e-19 97.4 93 50.5
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-18 97.1 92 51.1
BcaC06g35714 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-18 97.1 101 51.5
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 4.2e-18 95.1 91 51.6
BcaC05g27733 Brassica carinata HOM05D001038 ORTHO05D000395 5.5e-18 94.7 87 52.9
C05p37210 Brassica napus HOM05D001038 ORTHO05D000395 5.5e-18 94.7 87 52.9
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 7.1e-18 94.4 90 53.3
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 9.3e-18 94.0 96 47.9
C03p74230 Brassica napus HOM05D001038 ORTHO05D000395 9.3e-18 94.0 93 49.5
BcaB08g35415 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-17 93.6 93 49.5
BolC4t24024H Brassica oleracea HOM05D001038 ORTHO05D000395 1.2e-17 93.6 91 52.7
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 1.6e-17 93.2 90 51.1
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-17 92.8 95 49.5
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-17 92.8 92 48.9
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 2.1e-17 92.8 92 48.9
BcaB01g01124 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-17 92.4 94 48.9
BolC3t19681H Brassica oleracea HOM05D001038 ORTHO05D000395 2.7e-17 92.4 93 48.4
BraA07t28816Z Brassica rapa HOM05D001038 ORTHO05D000395 2.7e-17 92.4 92 47.8
BolC4t27362H Brassica oleracea HOM05D001038 ORTHO05D000395 3.5e-17 92.0 95 51.6
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 4.6e-17 91.7 95 45.3
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 4.6e-17 91.7 95 45.3
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 4.6e-17 91.7 91 49.5
BcaB07g31487 Brassica carinata HOM05D001038 ORTHO05D000395 6.0e-17 91.3 90 48.9
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 6.0e-17 91.3 90 48.9
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 6.0e-17 91.3 99 46.5
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 1.0e-16 90.5 92 50.0
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-16 90.5 92 47.8
C09p39690 Brassica napus HOM05D001038 ORTHO05D000395 1.0e-16 90.5 92 50.0
BolC2t07185H Brassica oleracea HOM05D001038 ORTHO05D000395 1.0e-16 90.5 87 51.7
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 1.0e-16 90.5 92 47.8
BolC9t56849H Brassica oleracea HOM05D001038 ORTHO05D000395 1.0e-16 90.5 92 50.0
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-16 90.1 92 48.9
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 2.3e-16 89.4 92 46.7
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 2.3e-16 89.4 95 44.2
BraA05t20013Z Brassica rapa HOM05D001038 ORTHO05D000395 2.3e-16 89.4 90 48.9
BolC7t41662H Brassica oleracea HOM05D001038 ORTHO05D031981 3.0e-16 89.0 77 59.7
BcaC01g02304 Brassica carinata HOM05D001038 ORTHO05D000395 3.9e-16 88.6 90 48.9
C03p66800 Brassica napus HOM05D001038 ORTHO05D000395 3.9e-16 88.6 90 48.9
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 5.1e-16 88.2 92 47.8
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 5.1e-16 88.2 92 44.6
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 8.7e-16 87.4 99 42.4
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 8.7e-16 87.4 97 45.4
BraA04t16796Z Brassica rapa HOM05D001038 ORTHO05D000395 8.7e-16 87.4 89 49.4
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 8.7e-16 87.4 99 42.4
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 1.9e-15 86.3 90 44.4
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 1.9e-15 86.3 90 44.4
BcaC09g50083 Brassica carinata HOM05D001038 ORTHO05D000395 2.5e-15 85.9 87 48.3
BraA06t24005Z Brassica rapa HOM05D001038 ORTHO05D000395 2.5e-15 85.9 81 58.0
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 3.3e-15 85.5 94 45.7
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 7.4e-15 84.3 92 45.7
BcaC06g34271 Brassica carinata HOM05D001038 ORTHO05D000395 7.4e-15 84.3 97 44.3
BNapus_Darmor_BZH_scaffold_97p00150 Brassica napus HOM05D001038 ORTHO05D000395 7.4e-15 84.3 91 49.5
BcaB07g32736 Brassica carinata HOM05D001038 ORTHO05D024484 2.8e-14 82.4 69 59.4
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 8.2e-14 80.9 90 44.4
BcaC01g04980 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-13 80.5 95 45.3
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-13 80.5 87 44.8
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-13 80.1 90 40.0
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 1.8e-13 79.7 90 40.0
BolC3t16968H Brassica oleracea HOM05D001038 ORTHO05D000395 4.1e-13 78.6 92 46.7
A06p28660 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-12 76.6 80 46.2
BolC4t23574H Brassica oleracea HOM05D001038 ORTHO05D000395 1.5e-12 76.6 95 45.3
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 1.5e-12 76.6 85 43.5
BraA06t25806Z Brassica rapa HOM05D001038 ORTHO05D000395 1.5e-12 76.6 80 46.2
BcaNung02282 Brassica carinata HOM05D001038 ORTHO05D000395 2.6e-12 75.9 95 44.2
C09p68940 Brassica napus HOM05D001038 ORTHO05D000395 2.6e-12 75.9 95 44.2
BolC3t20321H Brassica oleracea HOM05D001038 ORTHO05D000395 2.6e-12 75.9 92 45.7
BolC7t44786H Brassica oleracea HOM05D001038 ORTHO05D000395 2.6e-12 75.9 95 44.2
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 2.6e-12 75.9 87 42.5
BcaB08g36368 Brassica carinata HOM05D001038 ORTHO05D000395 3.4e-12 75.5 87 42.5
C07p60310 Brassica napus HOM05D001038 ORTHO05D000395 7.6e-12 74.3 95 42.1
BcaB01g01350 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-11 73.9 68 54.4
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 2.9e-11 72.4 94 39.4
CARHR216710 Cardamine hirsuta HOM05D001038 ORTHO05D000395 2.9e-11 72.4 91 39.6
BcaB06g28542 Brassica carinata HOM05D001038 ORTHO05D000395 3.8e-11 72.0 92 41.3
BcaB08g34623 Brassica carinata HOM05D001038 ORTHO05D000395 5.0e-11 71.6 91 40.7
BcaB05g23513 Brassica carinata HOM05D001038 ORTHO05D000395 6.5e-11 71.2 77 44.2
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-10 70.1 90 41.1
BcaB08g34364 Brassica carinata HOM05D001038 ORTHO05D000395 2.5e-10 69.3 90 41.1
BcaC05g28246 Brassica carinata HOM05D001038 ORTHO05D031796 2.5e-10 69.3 90 38.9
C05p42760 Brassica napus HOM05D001038 ORTHO05D031796 2.5e-10 69.3 90 38.9
Thhalv10011074m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 2.5e-10 69.3 91 40.7
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 4.2e-10 68.6 90 42.2
A09p58370 Brassica napus HOM05D001038 ORTHO05D000395 4.2e-10 68.6 83 45.8
BcaB05g21586 Brassica carinata HOM05D001038 ORTHO05D000395 5.5e-10 68.2 90 42.2
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 5.5e-10 68.2 73 41.1
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 5.5e-10 68.2 73 41.1
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 7.2e-10 67.8 90 40.0
Thhalv10022419m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 7.2e-10 67.8 91 40.7
C07p11920 Brassica napus HOM05D001038 ORTHO05D031981 9.3e-10 67.4 77 48.1
BcaC06g33888 Brassica carinata HOM05D001038 ORTHO05D017617 1.2e-09 67.0 92 39.1
Thhalv10000713m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 1.2e-09 67.0 91 41.8
Thhalv10002299m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 1.2e-09 67.0 91 41.8
Thhalv10003015m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 1.2e-09 67.0 90 41.1
BcaC01g03478 Brassica carinata HOM05D001038 ORTHO05D000395 1.6e-09 66.6 74 47.3
C03p52030 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-09 66.6 74 47.3
BolC3t17485H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-09 66.6 74 47.3
AL8G20830 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 2.1e-09 66.2 89 37.1
BcaB01g02362 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-09 66.2 96 41.7
BolC7t44103H Brassica oleracea HOM05D001038 ORTHO05D000395 2.1e-09 66.2 87 39.1
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 2.1e-09 66.2 62 50.0
BcaC04g19622 Brassica carinata HOM05D001038 ORTHO05D000395 3.5e-09 65.5 72 47.2
C01p40340 Brassica napus HOM05D001038 ORTHO05D000395 3.5e-09 65.5 94 38.3
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 4.6e-09 65.1 90 40.0
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 6.1e-09 64.7 90 41.1
BolC3t16999H Brassica oleracea HOM05D001038 ORTHO05D018639 1.3e-08 63.5 64 46.9
Thhalv10015691m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 1.3e-08 63.5 91 39.6
BolC6t37790H Brassica oleracea HOM05D001038 ORTHO05D000395 1.8e-08 63.2 87 37.9
Thhalv10023977m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 1.8e-08 63.2 91 39.6
Carub.0004s1123 Capsella rubella HOM05D001038 ORTHO05D000395 2.3e-08 62.8 96 37.5
BcaC09g51594 Brassica carinata HOM05D001038 ORTHO05D021830 3.0e-08 62.4 58 53.4
C01p11670 Brassica napus HOM05D001038 ORTHO05D021830 3.0e-08 62.4 58 53.4
C09p35780 Brassica napus HOM05D001038 ORTHO05D000395 3.0e-08 62.4 54 57.4
BolC1t01131H Brassica oleracea HOM05D001038 ORTHO05D021830 3.0e-08 62.4 58 53.4
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 3.0e-08 62.4 54 57.4
Carub.0013s0014 Capsella rubella HOM05D001038 ORTHO05D000395 3.9e-08 62.0 96 37.5
AL3G41000 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 6.7e-08 61.2 93 39.8
AL6G49460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 6.7e-08 61.2 93 39.8
AL3G41200 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 8.7e-08 60.8 89 36.0
A07p30050 Brassica napus HOM05D001038 ORTHO05D000395 8.7e-08 60.8 59 49.2
A02p26950 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-07 60.5 90 38.9
C05p12340 Brassica napus HOM05D001038 ORTHO05D040140 1.1e-07 60.5 81 39.5
AL6G43780 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 1.5e-07 60.1 94 37.2
C09p50150 Brassica napus HOM05D001038 ORTHO05D000395 1.9e-07 59.7 68 45.6
Thhalv10015533m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 1.9e-07 59.7 91 38.5
CARHR034790 Cardamine hirsuta HOM05D001038 ORTHO05D000395 3.3e-07 58.9 92 34.8
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 4.3e-07 58.5 61 45.9
C06p26280 Brassica napus HOM05D001038 ORTHO05D000395 4.3e-07 58.5 89 36.0
AL5G24460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 7.4e-07 57.8 90 38.9
A03p30780 Brassica napus HOM05D001038 ORTHO05D000395 7.4e-07 57.8 64 48.4
BraA03t12256Z Brassica rapa HOM05D001038 ORTHO05D000395 7.4e-07 57.8 64 48.4
C05p34660 Brassica napus HOM05D001038 ORTHO05D000395 9.7e-07 57.4 79 40.5
Carub.0007s2445 Capsella rubella HOM05D001038 ORTHO05D000395 9.7e-07 57.4 89 36.0
BcaB06g28671 Brassica carinata HOM05D001038 ORTHO05D018639 1.3e-06 57.0 64 45.3
BcaC04g19884 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-06 57.0 68 44.1
BcaC06g32026 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-06 57.0 80 41.2
C08p27920 Brassica napus HOM05D001038 ORTHO05D018639 1.3e-06 57.0 61 45.9
BolC4t26208H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-06 57.0 62 50.0
BolC7t44009H Brassica oleracea HOM05D001038 ORTHO05D024484 1.3e-06 57.0 47 55.3
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-06 55.8 92 34.8
SpUn0001_0050 Schrenkiella parvula HOM05D001038 ORTHO05D000395 2.8e-06 55.8 70 44.3
BcaB08g35558 Brassica carinata HOM05D001038 ORTHO05D000395 3.7e-06 55.5 75 42.7
BcaC03g15201 Brassica carinata HOM05D004375 ORTHO05D008558 3.7e-06 55.5 96 32.3
BraA03t13821Z Brassica rapa HOM05D001038 ORTHO05D000395 3.7e-06 55.5 62 48.4
BraA04t16612Z Brassica rapa HOM05D001038 ORTHO05D018639 3.7e-06 55.5 64 43.8
BolC3t21361H Brassica oleracea HOM05D004375 ORTHO05D008558 4.8e-06 55.1 96 32.3


User provided reference genes

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