Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p18290 Brassica napus HOM05D001038 ORTHO05D010763 2.5e-83 312.0 153 100.0
BolC7t41684H Brassica oleracea HOM05D001038 ORTHO05D010763 1.2e-69 266.5 154 87.0
BraA06t25316Z Brassica rapa HOM05D001038 ORTHO05D010763 1.9e-46 189.5 106 86.8
BolC7t41410H Brassica oleracea HOM05D001038 ORTHO05D010763 2.5e-46 189.1 154 65.6
C07p09720 Brassica napus HOM05D001038 ORTHO05D010763 8.0e-45 184.1 154 64.9
BolC7t42339H Brassica oleracea HOM05D001038 ORTHO05D010763 2.0e-43 179.5 83 98.8
BraA06t25408Z Brassica rapa HOM05D001038 ORTHO05D010763 2.0e-43 179.5 103 85.4
C07p12200 Brassica napus HOM05D001038 ORTHO05D010763 1.0e-39 167.2 154 61.0
C07p12170 Brassica napus HOM05D001038 ORTHO05D010763 4.3e-38 161.8 154 59.7
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 7.3e-38 161.0 155 60.0
BolC2t11143H Brassica oleracea HOM05D001038 ORTHO05D024385 8.9e-36 154.1 154 57.1
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 2.7e-32 142.5 152 44.1
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 3.9e-31 138.7 126 46.0
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 6.6e-31 137.9 126 46.0
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 1.1e-30 137.1 137 45.3
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 1.9e-30 136.3 148 43.9
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 4.3e-30 135.2 126 46.0
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 4.3e-30 135.2 126 46.0
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 5.6e-30 134.8 155 45.8
BcaB06g26737 Brassica carinata HOM05D001038 ORTHO05D010763 1.2e-29 133.7 147 42.2
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 2.1e-29 132.9 126 45.2
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-29 132.5 148 43.9
BcaB06g26982 Brassica carinata HOM05D001038 ORTHO05D000395 3.6e-29 132.1 155 45.2
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 4.7e-29 131.7 132 51.5
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 6.2e-29 131.3 147 41.5
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 8.0e-29 131.0 126 43.7
BcaNung01360 Brassica carinata HOM05D001038 ORTHO05D010763 2.3e-28 129.4 147 42.2
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 3.1e-28 129.0 126 44.4
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 4.0e-28 128.6 125 45.6
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 6.8e-28 127.9 153 45.8
BcaB07g33328 Brassica carinata HOM05D001038 ORTHO05D010763 6.8e-28 127.9 126 45.2
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 1.5e-27 126.7 154 43.5
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 1.5e-27 126.7 126 42.9
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 1.5e-27 126.7 154 43.5
C05p37200 Brassica napus HOM05D001038 ORTHO05D017560 2.0e-27 126.3 154 45.5
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 2.0e-27 126.3 148 41.9
C04p58380 Brassica napus HOM05D001038 ORTHO05D010763 2.6e-27 125.9 132 43.9
BraA06t25412Z Brassica rapa HOM05D001038 ORTHO05D017560 7.5e-27 124.4 154 42.2
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 9.8e-27 124.0 132 49.2
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 1.7e-26 123.2 154 44.2
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 6.4e-26 121.3 132 46.2
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-25 120.2 152 42.8
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-23 113.6 155 38.7
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-23 113.2 137 42.3
C02p45450 Brassica napus HOM05D001038 ORTHO05D017560 3.0e-23 112.5 150 39.3
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 3.9e-23 112.1 127 47.2
Thhalv10009967m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 6.6e-23 111.3 125 41.6
C09p26140 Brassica napus HOM05D001038 ORTHO05D010763 1.5e-22 110.2 64 92.2
Thhalv10003408m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.5e-22 110.2 125 40.8
Thhalv10023964m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 3.3e-22 109.0 125 40.0
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 5.6e-22 108.2 154 39.6
Thhalv10002771m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 7.3e-22 107.8 125 43.2
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 1.2e-21 107.1 157 42.0
BolC2t08169H Brassica oleracea HOM05D001038 ORTHO05D010946 1.6e-21 106.7 124 42.7
BolC6t38916H Brassica oleracea HOM05D001038 ORTHO05D010763 1.6e-21 106.7 64 87.5
C08p05930 Brassica napus HOM05D001038 ORTHO05D010763 2.1e-21 106.3 64 90.6
C08p05940 Brassica napus HOM05D001038 ORTHO05D024385 2.8e-21 105.9 47 95.7
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 2.8e-21 105.9 110 45.5
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 2.8e-21 105.9 151 36.4
Thhalv10003372m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 2.8e-21 105.9 147 36.7
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 3.6e-21 105.5 125 39.2
BraA04t17267Z Brassica rapa HOM05D001038 ORTHO05D014932 6.2e-21 104.8 154 40.9
C05p34670 Brassica napus HOM05D001038 ORTHO05D032287 8.1e-21 104.4 125 38.4
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-20 103.2 155 37.4
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 1.8e-20 103.2 155 37.4
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-20 102.8 118 48.3
BcaB04g17277 Brassica carinata HOM05D001038 ORTHO05D014932 3.1e-20 102.4 154 39.0
BcaB08g35416 Brassica carinata HOM05D001038 ORTHO05D017560 6.8e-20 101.3 110 50.0
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-19 99.8 147 36.7
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 2.6e-19 99.4 127 44.9
BraA02t08689Z Brassica rapa HOM05D001038 ORTHO05D010763 2.6e-19 99.4 157 40.1
BolC2t07874H Brassica oleracea HOM05D001038 ORTHO05D010946 5.8e-19 98.2 125 36.0
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 7.5e-19 97.8 149 35.6
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 1.7e-18 96.7 126 37.3
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 1.7e-18 96.7 124 36.3
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-18 96.3 147 36.7
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 3.7e-18 95.5 153 34.6
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 4.9e-18 95.1 99 44.4
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 4.9e-18 95.1 99 44.4
BcaC08g45228 Brassica carinata HOM05D001038 ORTHO05D010946 1.1e-17 94.0 123 34.1
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 1.1e-17 94.0 149 34.2
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 1.9e-17 93.2 132 40.9
BolC7t41626H Brassica oleracea HOM05D001038 ORTHO05D014932 3.2e-17 92.4 131 41.2
Carub.0004s1123 Capsella rubella HOM05D001038 ORTHO05D000395 3.2e-17 92.4 123 40.7
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 4.1e-17 92.0 157 36.3
C09p31530 Brassica napus HOM05D020314 ORTHO05D032005 5.4e-17 91.7 126 33.3
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 7.1e-17 91.3 148 33.8
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 7.1e-17 91.3 149 33.6
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 9.2e-17 90.9 132 39.4
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 9.2e-17 90.9 132 39.4
BcaB08g34843 Brassica carinata HOM05D001038 ORTHO05D010946 1.6e-16 90.1 124 33.1
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-16 90.1 153 37.3
C07p30940 Brassica napus HOM05D001038 ORTHO05D014932 2.1e-16 89.7 153 36.6
Thhalv10002173m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 4.6e-16 88.6 134 38.8
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 6.0e-16 88.2 148 33.1
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 6.0e-16 88.2 149 34.9
BolC3t14874H Brassica oleracea HOM05D001038 ORTHO05D010763 6.0e-16 88.2 112 38.4
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 7.8e-16 87.8 133 37.6
BolC5t31712H Brassica oleracea HOM05D001038 ORTHO05D032287 1.0e-15 87.4 123 33.3
AT2G07240 Arabidopsis thaliana HOM05D001038 ORTHO05D010763 1.7e-15 86.7 104 39.4
BcaC07g37457 Brassica carinata HOM05D001038 ORTHO05D010763 3.0e-15 85.9 103 48.5
Thhalv10029129m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 3.0e-15 85.9 125 34.4
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 3.9e-15 85.5 58 60.3
BcaB01g01303 Brassica carinata HOM05D001038 ORTHO05D000395 5.1e-15 85.1 147 37.4
Thhalv10015447m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 5.1e-15 85.1 157 37.6
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 8.6e-15 84.3 55 65.5
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 8.6e-15 84.3 95 41.1
Thhalv10023140m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.1e-14 84.0 123 38.2
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 1.5e-14 83.6 95 41.1
Thhalv10015415m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 1.9e-14 83.2 155 37.4
C05p36210 Brassica napus HOM05D001038 ORTHO05D017560 2.5e-14 82.8 119 42.0
BcaC03g14544 Brassica carinata HOM05D001038 ORTHO05D010946 3.3e-14 82.4 124 33.1
A05p28250 Brassica napus HOM05D001038 ORTHO05D019929 3.3e-14 82.4 155 32.3
BraA05t21706Z Brassica rapa HOM05D001038 ORTHO05D019929 3.3e-14 82.4 155 32.3
A02p12560 Brassica napus HOM05D001038 ORTHO05D019929 4.3e-14 82.0 155 32.3
Carub.0013s0014 Capsella rubella HOM05D001038 ORTHO05D000395 5.6e-14 81.6 104 39.4
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 7.3e-14 81.3 85 43.5
BolC5t32344H Brassica oleracea HOM05D001038 ORTHO05D017560 1.2e-13 80.5 119 41.2
C06p00840 Brassica napus HOM05D001038 ORTHO05D010946 1.6e-13 80.1 124 32.3
BolC3t20322H Brassica oleracea HOM05D001038 ORTHO05D010946 1.6e-13 80.1 124 32.3
BolC2t11347H Brassica oleracea HOM05D001038 ORTHO05D000395 3.6e-13 79.0 93 44.1
BcaC01g04978 Brassica carinata HOM05D001038 ORTHO05D010946 4.7e-13 78.6 128 32.8
BcaC06g35484 Brassica carinata HOM05D001038 ORTHO05D000395 4.7e-13 78.6 149 32.2
C07p21850 Brassica napus HOM05D001038 ORTHO05D019929 4.7e-13 78.6 155 31.6
A04p11350 Brassica napus HOM05D001038 ORTHO05D033175 6.2e-13 78.2 95 41.1
BraA04t16797Z Brassica rapa HOM05D001038 ORTHO05D033175 6.2e-13 78.2 95 41.1
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 2.3e-12 76.3 97 41.2
C09p39680 Brassica napus HOM05D001038 ORTHO05D010763 2.3e-12 76.3 97 41.2
BcaB01g01614 Brassica carinata HOM05D001038 ORTHO05D014932 3.1e-12 75.9 132 35.6
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 4.0e-12 75.5 81 46.9
BolC9t55517H Brassica oleracea HOM05D001038 ORTHO05D024385 4.0e-12 75.5 37 97.3
BNapus_Darmor_BZH_scaffold_103p00090 Brassica napus HOM05D016987 ORTHO05D010763 1.5e-11 73.6 81 51.9
BNapus_Darmor_BZH_scaffold_104p00100 Brassica napus HOM05D016987 ORTHO05D010763 1.5e-11 73.6 81 51.9
BolC3t15494H Brassica oleracea HOM05D001038 ORTHO05D010946 1.5e-11 73.6 123 30.1
AL5G24460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 2.6e-11 72.8 128 32.8
Sp4g09840 Schrenkiella parvula HOM05D001038 ORTHO05D010763 3.4e-11 72.4 106 36.8
C05p38700 Brassica napus HOM05D037879 ORTHO05D027353 1.3e-10 70.5 135 28.9
C03p52030 Brassica napus HOM05D001038 ORTHO05D000395 2.2e-10 69.7 60 61.7
BolC3t17485H Brassica oleracea HOM05D001038 ORTHO05D000395 2.2e-10 69.7 60 61.7
BolC2t09973H Brassica oleracea HOM05D001038 ORTHO05D021697 2.9e-10 69.3 107 31.8
BcaB02g10814 Brassica carinata HOM05D001038 ORTHO05D010946 3.8e-10 68.9 103 39.8
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 3.8e-10 68.9 77 40.3
A03p68390 Brassica napus HOM05D016987 ORTHO05D010763 3.8e-10 68.9 82 51.2
BraSC36t46107Z Brassica rapa HOM05D016987 ORTHO05D010763 3.8e-10 68.9 82 51.2
AL3G41000 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 4.9e-10 68.6 128 32.0
AL6G49460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 1.1e-09 67.4 128 31.2
C03p31470 Brassica napus HOM05D001038 ORTHO05D010946 1.1e-09 67.4 123 30.1
C02p39590 Brassica napus HOM05D001038 ORTHO05D021697 1.9e-09 66.6 107 31.8
BcaB03g16061 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-09 66.2 86 40.7
AL2G29150 Arabidopsis lyrata HOM05D020011 ORTHO05D021433 3.2e-09 65.9 135 31.1
AL5G38970 Arabidopsis lyrata HOM05D020011 ORTHO05D021433 3.2e-09 65.9 135 31.1
Thhalv10003093m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 3.2e-09 65.9 116 37.1
BraA01t02618Z Brassica rapa HOM05D016987 ORTHO05D010763 1.2e-08 63.9 82 48.8
A04p08430 Brassica napus HOM05D001038 ORTHO05D010946 2.1e-08 63.2 102 33.3
Thhalv10023958m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 2.7e-08 62.8 132 32.6
BcaB07g32586 Brassica carinata HOM05D004375 ORTHO05D016090 4.6e-08 62.0 126 32.5
BolC4t26248H Brassica oleracea HOM05D001038 ORTHO05D018589 6.0e-08 61.6 111 35.1
CARHR120350 Cardamine hirsuta HOM05D001038 ORTHO05D010763 1.0e-07 60.8 60 43.3
Thhalv10001261m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 1.0e-07 60.8 115 36.5
C03p10830 Brassica napus HOM05D004375 ORTHO05D008558 1.7e-07 60.1 130 29.2
BraA08t32953Z Brassica rapa HOM05D001038 ORTHO05D014932 2.3e-07 59.7 67 49.3
AL8G20830 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 3.0e-07 59.3 116 25.9
AL6G43780 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 1.5e-06 57.0 56 39.3
BcaB08g36238 Brassica carinata HOM05D011654 ORTHO05D010946 7.3e-06 54.7 103 28.2
Thhalv10005571m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 7.3e-06 54.7 120 29.2
BcaB04g19444 Brassica carinata HOM05D001038 ORTHO05D010763 9.6e-06 54.3 56 41.1
BcaC02g09163 Brassica carinata HOM05D000675 ORTHO05D000395 9.6e-06 54.3 103 33.0


User provided reference genes

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