Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p00460 Brassica napus HOM05D001738 ORTHO05D001644 3.1e-56 221.5 105 100.0
A01p36040 Brassica napus HOM05D001738 ORTHO05D001644 8.5e-46 186.8 102 89.2
BraA01t03683Z Brassica rapa HOM05D001738 ORTHO05D001644 8.5e-46 186.8 102 89.2
BcaC09g48787 Brassica carinata HOM05D001738 ORTHO05D001644 1.4e-45 186.0 102 89.2
C01p45920 Brassica napus HOM05D001738 ORTHO05D001644 1.4e-45 186.0 102 89.2
C01p46040 Brassica napus HOM05D001738 ORTHO05D001644 1.4e-45 186.0 102 89.2
BolC1t04554H Brassica oleracea HOM05D001738 ORTHO05D001644 1.4e-45 186.0 102 89.2
BcaC06g36748 Brassica carinata HOM05D001738 ORTHO05D001644 9.1e-40 166.8 91 87.9
BcaB06g28896 Brassica carinata HOM05D001738 ORTHO05D001644 4.5e-39 164.5 110 76.4
AL4G18870 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 7.2e-29 130.6 110 61.8
A08p08620 Brassica napus HOM05D001738 ORTHO05D001644 1.2e-28 129.8 111 61.3
BraA08t32876Z Brassica rapa HOM05D001738 ORTHO05D001644 1.2e-28 129.8 111 61.3
Carub.0001s1342 Capsella rubella HOM05D001738 ORTHO05D001644 1.4e-24 116.3 110 53.6
AL5G16800 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 3.1e-24 115.2 114 57.0
BcaB08g37391 Brassica carinata HOM05D001738 ORTHO05D001644 4.5e-23 111.3 109 53.2
BolC8t52365H Brassica oleracea HOM05D001738 ORTHO05D001644 2.2e-22 109.0 111 54.1
A01p12930 Brassica napus HOM05D001738 ORTHO05D001644 9.4e-21 103.6 108 55.6
BraA01t01237Z Brassica rapa HOM05D001738 ORTHO05D001644 9.4e-21 103.6 108 55.6
AL1G22300 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 2.7e-20 102.1 108 50.9
BcaNung02775 Brassica carinata HOM05D001738 ORTHO05D001644 1.0e-19 100.1 111 49.5
AL8G23030 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 1.4e-19 99.8 110 51.8
A09p64540 Brassica napus HOM05D001738 ORTHO05D001644 2.3e-19 99.0 103 50.5
BraA09t41803Z Brassica rapa HOM05D001738 ORTHO05D001644 2.3e-19 99.0 103 50.5
AL1G23150 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 3.0e-19 98.6 112 50.9
A09p64530 Brassica napus HOM05D001738 ORTHO05D001644 4.0e-19 98.2 103 50.5
BraA09t41802Z Brassica rapa HOM05D001738 ORTHO05D001644 4.0e-19 98.2 103 50.5
A09p64880 Brassica napus HOM05D001738 ORTHO05D001644 8.8e-19 97.1 103 48.5
A09p64890 Brassica napus HOM05D001738 ORTHO05D001644 2.0e-18 95.9 103 49.5
C08p48460 Brassica napus HOM05D001738 ORTHO05D001644 2.0e-18 95.9 109 47.7
BraA09t41808Z Brassica rapa HOM05D001738 ORTHO05D001644 2.0e-18 95.9 103 49.5
C03p83170 Brassica napus HOM05D001738 ORTHO05D001644 2.6e-18 95.5 110 50.9
BolC8t52384H Brassica oleracea HOM05D001738 ORTHO05D001644 2.6e-18 95.5 109 47.7
BcaNung06201 Brassica carinata HOM05D001738 ORTHO05D001644 4.4e-18 94.7 109 47.7
BolC3t20600H Brassica oleracea HOM05D001738 ORTHO05D001644 5.7e-18 94.4 111 50.5
A08p15080 Brassica napus HOM05D001738 ORTHO05D001644 2.8e-17 92.0 111 50.5
BcaB07g30292 Brassica carinata HOM05D001738 ORTHO05D001644 3.1e-16 88.6 106 48.1
A02p32990 Brassica napus HOM05D001738 ORTHO05D001644 3.1e-16 88.6 105 48.6
BolC2t11157H Brassica oleracea HOM05D001738 ORTHO05D001644 3.1e-16 88.6 105 48.6
BolC8t47900H Brassica oleracea HOM05D001738 ORTHO05D001644 7.0e-16 87.4 82 54.9
C02p50730 Brassica napus HOM05D001738 ORTHO05D001644 1.2e-15 86.7 105 47.6
BolC2t11152H Brassica oleracea HOM05D001738 ORTHO05D001644 1.2e-15 86.7 105 47.6
BraA02t08324Z Brassica rapa HOM05D001738 ORTHO05D001644 1.2e-15 86.7 105 47.6
BcaC07g37559 Brassica carinata HOM05D001738 ORTHO05D001644 1.6e-15 86.3 105 48.6
AL1G58940 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 2.7e-15 85.5 113 49.6
CARHR014880 Cardamine hirsuta HOM05D001738 ORTHO05D001644 1.3e-14 83.2 108 48.1
Carub.0006s0880 Capsella rubella HOM05D001738 ORTHO05D001644 5.0e-14 81.3 106 46.2
BraA08t33488Z Brassica rapa HOM05D001738 ORTHO05D001644 1.1e-13 80.1 111 47.7
BcaB03g13098 Brassica carinata HOM05D001738 ORTHO05D001644 5.5e-13 77.8 106 42.5
Thhalv10009873m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 9.5e-13 77.0 115 43.5
AL1G20200 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 2.1e-12 75.9 104 41.3
BcaC04g20153 Brassica carinata HOM05D001738 ORTHO05D001644 2.1e-12 75.9 109 47.7
C04p12640 Brassica napus HOM05D001738 ORTHO05D001644 2.1e-12 75.9 109 47.7
Carub.0003s2506 Capsella rubella HOM05D001738 ORTHO05D001644 2.7e-12 75.5 107 43.0
AL6G20830 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 4.7e-12 74.7 106 43.4
C09p47220 Brassica napus HOM05D001738 ORTHO05D001644 6.1e-12 74.3 109 46.8
BolC9t57577H Brassica oleracea HOM05D001738 ORTHO05D001644 6.1e-12 74.3 109 46.8
AT5G10340 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 8.0e-12 73.9 106 43.4
AT4G01640 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 3.0e-11 72.0 107 42.1
BcaC04g18744 Brassica carinata HOM05D001738 ORTHO05D001644 3.0e-11 72.0 111 46.8
C09p59130 Brassica napus HOM05D001738 ORTHO05D001644 3.0e-11 72.0 111 46.8
AT1G09650 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 4.0e-11 71.6 111 39.6
CARHR119930 Cardamine hirsuta HOM05D001738 ORTHO05D001644 4.0e-11 71.6 111 41.4
Thhalv10007821m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 5.2e-11 71.2 113 41.6
AT2G34280 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 8.8e-11 70.5 107 41.1
BolC4t22913H Brassica oleracea HOM05D001738 ORTHO05D001644 8.8e-11 70.5 109 46.8
BcaC05g26334 Brassica carinata HOM05D001738 ORTHO05D001644 2.0e-10 69.3 91 40.7
BcaC07g38736 Brassica carinata HOM05D001738 ORTHO05D001644 2.0e-10 69.3 100 44.0
A06p37480 Brassica napus HOM05D001738 ORTHO05D001644 2.0e-10 69.3 90 44.4
BraA06t26672Z Brassica rapa HOM05D001738 ORTHO05D001644 2.0e-10 69.3 90 44.4
BraA08t35119Z Brassica rapa HOM05D001738 ORTHO05D001644 2.6e-10 68.9 109 42.2
BcaC05g26332 Brassica carinata HOM05D001738 ORTHO05D001644 7.5e-10 67.4 104 41.3
A08p31980 Brassica napus HOM05D001738 ORTHO05D001644 7.5e-10 67.4 109 41.3
BolC5t31051H Brassica oleracea HOM05D001738 ORTHO05D001644 7.5e-10 67.4 104 41.3
AT1G12490 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 9.8e-10 67.0 109 37.6
BcaB07g33225 Brassica carinata HOM05D001738 ORTHO05D001644 9.8e-10 67.0 111 43.2
A09p40630 Brassica napus HOM05D001738 ORTHO05D001644 9.8e-10 67.0 93 39.8
CARHR125670 Cardamine hirsuta HOM05D001738 ORTHO05D001644 9.8e-10 67.0 106 37.7
Carub.0008s0923 Capsella rubella HOM05D001738 ORTHO05D001644 1.3e-09 66.6 111 37.8
BcaC02g11659 Brassica carinata HOM05D001738 ORTHO05D001644 1.7e-09 66.2 112 45.5
BolC9t58733H Brassica oleracea HOM05D001738 ORTHO05D001644 1.7e-09 66.2 109 44.0
BcaB07g32397 Brassica carinata HOM05D001738 ORTHO05D001644 2.2e-09 65.9 102 39.2
Thhalv10021998m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 2.8e-09 65.5 92 42.4
BcaC04g19443 Brassica carinata HOM05D001738 ORTHO05D001644 3.7e-09 65.1 72 50.0
C02p51750 Brassica napus HOM05D001738 ORTHO05D001644 3.7e-09 65.1 54 63.0
BraA09t39559Z Brassica rapa HOM05D001738 ORTHO05D001644 4.9e-09 64.7 93 38.7
CARHR035940 Cardamine hirsuta HOM05D001738 ORTHO05D001644 6.3e-09 64.3 116 37.9
CARHR099040 Cardamine hirsuta HOM05D001738 ORTHO05D001644 6.3e-09 64.3 82 48.8
Sp1g27610 Schrenkiella parvula HOM05D001738 ORTHO05D001644 6.3e-09 64.3 108 37.0
A09p40640 Brassica napus HOM05D001738 ORTHO05D001644 8.3e-09 63.9 104 39.4
C05p23420 Brassica napus HOM05D001738 ORTHO05D001644 1.1e-08 63.5 107 39.3
BcaNung02452 Brassica carinata HOM05D001738 ORTHO05D001644 1.4e-08 63.2 110 38.2
C07p40890 Brassica napus HOM05D001738 ORTHO05D001644 1.4e-08 63.2 110 38.2
BolC7t44617H Brassica oleracea HOM05D001738 ORTHO05D001644 1.4e-08 63.2 110 38.2
Thhalv10021927m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 1.4e-08 63.2 94 39.4
AL7G46450 Arabidopsis lyrata HOM05D000626 ORTHO05D001644 2.4e-08 62.4 66 54.5
A06p37470 Brassica napus HOM05D001738 ORTHO05D001644 3.1e-08 62.0 110 38.2
CARHR124000 Cardamine hirsuta HOM05D001738 ORTHO05D001644 3.1e-08 62.0 107 38.3
AT1G14315 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 5.4e-08 61.2 100 40.0
A01p36190 Brassica napus HOM05D001738 ORTHO05D001644 5.4e-08 61.2 35 82.9
AL5G25310 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 7.0e-08 60.8 108 37.0
C05p23430 Brassica napus HOM05D001738 ORTHO05D001644 7.0e-08 60.8 78 41.0
Thhalv10009680m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 1.2e-07 60.1 110 39.1
BcaB03g11687 Brassica carinata HOM05D001738 ORTHO05D001644 1.6e-07 59.7 65 53.8
BcaC07g41803 Brassica carinata HOM05D001738 ORTHO05D001644 1.6e-07 59.7 49 53.1
Thhalv10003053m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 2.7e-07 58.9 87 41.4
Carub.0006s1692 Capsella rubella HOM05D001738 ORTHO05D001644 1.3e-06 56.6 112 37.5
BcaB04g18151 Brassica carinata HOM05D001738 ORTHO05D001644 1.7e-06 56.2 81 40.7
BcaB04g18152 Brassica carinata HOM05D001738 ORTHO05D001644 1.7e-06 56.2 81 40.7
BcaC01g00689 Brassica carinata HOM05D001738 ORTHO05D001644 2.3e-06 55.8 65 52.3
A02p33620 Brassica napus HOM05D001738 ORTHO05D001644 5.0e-06 54.7 51 58.8
BolC8t47248H Brassica oleracea HOM05D001738 ORTHO05D001644 6.6e-06 54.3 60 48.3
CARHR125660 Cardamine hirsuta HOM05D001738 ORTHO05D001644 6.6e-06 54.3 78 41.0
Thhalv10017844m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 6.6e-06 54.3 123 34.1
A04p28700 Brassica napus HOM05D001738 ORTHO05D001644 8.6e-06 53.9 122 32.8
BraA04t18347Z Brassica rapa HOM05D001738 ORTHO05D001644 8.6e-06 53.9 122 32.8
Thhalv10005403m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 8.6e-06 53.9 41 58.5


User provided reference genes

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